RNA–Protein interactions for RNA: ENST00000368521.9

C1orf43-206, Transcript of chromosome 1 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1orf43, Length 1,708 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-206ENST00000368521 SHROOM2Q13796 1616 aa21.33■■□□□ 1.01
C1orf43-206ENST00000368521 CAMSAP2Q08AD1 1489 aa21.33■■□□□ 1
C1orf43-206ENST00000368521 ARID3CA6NKF2 412 aa21.32■■□□□ 1
C1orf43-206ENST00000368521 ABCC10Q5T3U5 1492 aa21.31■■□□□ 1
C1orf43-206ENST00000368521 PLEKHD1A6NEE1 506 aa21.31■■□□□ 1
C1orf43-206ENST00000368521 CFDP1Q9UEE9 299 aaPredicted RBP21.31■■□□□ 1
C1orf43-206ENST00000368521 CHIC2Q9UKJ5 165 aa21.31■■□□□ 1
C1orf43-206ENST00000368521 PTPRGP23470 1445 aa21.3■■□□□ 1
C1orf43-206ENST00000368521 KIF14Q15058 1648 aa21.3■■□□□ 1
C1orf43-206ENST00000368521 KDM6BO15054 1643 aa21.3■■□□□ 1
C1orf43-206ENST00000368521 KDM5BQ9UGL1 1544 aa21.28■■□□□ 1
C1orf43-206ENST00000368521 ADGBQ8N7X0 1667 aa21.27■■□□□ 1
C1orf43-206ENST00000368521 MPHOSPH9Q99550 1183 aa21.27■■□□□ 1
C1orf43-206ENST00000368521 SHANK2Q9UPX8 1470 aa21.27■■□□□ 1
C1orf43-206ENST00000368521 NCOA1Q15788 1441 aa21.27■■□□□ 1
C1orf43-206ENST00000368521 CHD1O14646 1710 aa21.26■□□□□ 0.99
C1orf43-206ENST00000368521 CROCC2H7BZ55 1655 aa21.26■□□□□ 0.99
C1orf43-206ENST00000368521 ZNF644Q9H582 1327 aaPredicted RBP21.24■□□□□ 0.99
C1orf43-206ENST00000368521 TRIM52Q96A61 297 aa21.22■□□□□ 0.99
C1orf43-206ENST00000368521 CDC42BPAQ5VT25 1732 aa21.22■□□□□ 0.99
C1orf43-206ENST00000368521 ANKRD30BQ9BXX2 1392 aa21.21■□□□□ 0.99
C1orf43-206ENST00000368521 ANKRD30AQ9BXX3 1397 aa21.2■□□□□ 0.98
C1orf43-206ENST00000368521 ARHGEF5Q12774 1597 aa21.18■□□□□ 0.98
C1orf43-206ENST00000368521 RPRD2Q5VT52 1461 aaKnown RBP21.17■□□□□ 0.98
C1orf43-206ENST00000368521 RSPH4AQ5TD94 716 aa21.15■□□□□ 0.98
C1orf43-206ENST00000368521 PZPP20742 1482 aa21.13■□□□□ 0.97
C1orf43-206ENST00000368521 ABCC2Q92887 1545 aa21.13■□□□□ 0.97
C1orf43-206ENST00000368521 CLASP1Q7Z460 1538 aa21.12■□□□□ 0.97
C1orf43-206ENST00000368521 GTF3C3Q9Y5Q9 886 aa21.11■□□□□ 0.97
C1orf43-206ENST00000368521 PREX2Q70Z35 1606 aa21.1■□□□□ 0.97
C1orf43-206ENST00000368521 YTHDC1Q96MU7 727 aaKnown RBP21.1■□□□□ 0.97
C1orf43-206ENST00000368521 KDM5DQ9BY66 1539 aa21.1■□□□□ 0.97
C1orf43-206ENST00000368521 UHRF1BP1LA0JNW5 1464 aa21.1■□□□□ 0.97
C1orf43-206ENST00000368521 MBD5Q9P267 1494 aa21.1■□□□□ 0.97
C1orf43-206ENST00000368521 C9orf84Q5VXU9 1444 aa21.1■□□□□ 0.97
C1orf43-206ENST00000368521 ANKRD50Q9ULJ7 1429 aa21.1■□□□□ 0.97
C1orf43-206ENST00000368521 SLC4A1APQ9BWU0 796 aaKnown RBP21.09■□□□□ 0.97
C1orf43-206ENST00000368521 TEX14Q8IWB6 1497 aa21.07■□□□□ 0.96
C1orf43-206ENST00000368521 KIAA1107Q9UPP5 1409 aa21.07■□□□□ 0.96
C1orf43-206ENST00000368521 OSCARQ8IYS5 282 aa21.07■□□□□ 0.96
C1orf43-206ENST00000368521 ZNF777Q9ULD5 760 aaPredicted RBP21.06■□□□□ 0.96
C1orf43-206ENST00000368521 TSPY4P0CV99 314 aa21.05■□□□□ 0.96
C1orf43-206ENST00000368521 TSPY10P0CW01 314 aa21.05■□□□□ 0.96
C1orf43-206ENST00000368521 DDX10Q13206 875 aaKnown RBP21.05■□□□□ 0.96
C1orf43-206ENST00000368521 CCER2I3L3R5 266 aa21.04■□□□□ 0.96
C1orf43-206ENST00000368521 CCDC141Q6ZP82 1450 aa21.04■□□□□ 0.96
C1orf43-206ENST00000368521 L3MBTL2Q969R5 705 aa21.04■□□□□ 0.96
C1orf43-206ENST00000368521 CDC42BPBQ9Y5S2 1711 aa21.03■□□□□ 0.96
C1orf43-206ENST00000368521 PLEKHH2Q8IVE3 1493 aa21.03■□□□□ 0.96
C1orf43-206ENST00000368521 MAST1Q9Y2H9 1570 aa21.03■□□□□ 0.96
C1orf43-206ENST00000368521 SAMD9LQ8IVG5 1584 aa21.02■□□□□ 0.96
C1orf43-206ENST00000368521 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.99■□□□□ 0.955e-8■■■□□ 14.8
C1orf43-206ENST00000368521 EIF4G2P78344 907 aaKnown RBP eCLIP20.98■□□□□ 0.95
C1orf43-206ENST00000368521 ERCC6L2Q5T890 1561 aa20.98■□□□□ 0.95
C1orf43-206ENST00000368521 KIF15Q9NS87 1388 aa20.97■□□□□ 0.95
C1orf43-206ENST00000368521 FOXD1Q16676 465 aa20.95■□□□□ 0.94
C1orf43-206ENST00000368521 TTC37Q6PGP7 1564 aa20.95■□□□□ 0.94
C1orf43-206ENST00000368521 ANP32CO43423 234 aa20.95■□□□□ 0.94
C1orf43-206ENST00000368521 HSPA5P11021 654 aaKnown RBP20.94■□□□□ 0.94
C1orf43-206ENST00000368521 MYO5CQ9NQX4 1742 aa20.93■□□□□ 0.94
C1orf43-206ENST00000368521 DNAJC5Q9H3Z4 198 aa20.93■□□□□ 0.94
C1orf43-206ENST00000368521 ARAP3Q8WWN8 1544 aa20.92■□□□□ 0.94
C1orf43-206ENST00000368521 PLXNC1O60486 1568 aa20.92■□□□□ 0.94
C1orf43-206ENST00000368521 NUP155O75694 1391 aa20.92■□□□□ 0.94
C1orf43-206ENST00000368521 HNRNPMP52272 730 aaKnown RBP eCLIP20.92■□□□□ 0.94
C1orf43-206ENST00000368521 PKD2Q13563 968 aa20.92■□□□□ 0.94
C1orf43-206ENST00000368521 ARHGAP5Q13017 1502 aa20.91■□□□□ 0.94
C1orf43-206ENST00000368521 PLCH2O75038 1416 aa20.91■□□□□ 0.94
C1orf43-206ENST00000368521 SPATA31E1Q6ZUB1 1445 aa20.91■□□□□ 0.94
C1orf43-206ENST00000368521 ARHGEF12Q9NZN5 1544 aa20.91■□□□□ 0.94
C1orf43-206ENST00000368521 ZCCHC11Q5TAX3 1644 aaKnown RBP20.9■□□□□ 0.94
C1orf43-206ENST00000368521 UHRF1BP1Q6BDS2 1440 aa20.9■□□□□ 0.94
C1orf43-206ENST00000368521 HIRIP3Q9BW71 556 aaPredicted RBP20.9■□□□□ 0.94
C1orf43-206ENST00000368521 NBPF8Q3BBV2 869 aa20.88■□□□□ 0.93
C1orf43-206ENST00000368521 SYCP2Q9BX26 1530 aa20.87■□□□□ 0.93
C1orf43-206ENST00000368521 WASHC2AQ641Q2 1341 aa20.87■□□□□ 0.93
C1orf43-206ENST00000368521 UNC13BO14795 1591 aa20.86■□□□□ 0.93
C1orf43-206ENST00000368521 EFCAB2Q5VUJ9 269 aa20.83■□□□□ 0.92
C1orf43-206ENST00000368521 POLR1AO95602 1720 aaPredicted RBP20.83■□□□□ 0.92
C1orf43-206ENST00000368521 DUOX2Q9NRD8 1548 aa20.82■□□□□ 0.92
C1orf43-206ENST00000368521 FAM135AQ9P2D6 1515 aa20.82■□□□□ 0.92
C1orf43-206ENST00000368521 CCDC7Q96M83 1385 aa20.81■□□□□ 0.92
C1orf43-206ENST00000368521 ERBINQ96RT1 1412 aa20.81■□□□□ 0.92
C1orf43-206ENST00000368521 CNTLNQ9NXG0 1405 aa20.81■□□□□ 0.92
C1orf43-206ENST00000368521 ARID4BQ4LE39 1312 aaPredicted RBP20.8■□□□□ 0.92
C1orf43-206ENST00000368521 MAGI2Q86UL8 1455 aa20.8■□□□□ 0.92
C1orf43-206ENST00000368521 ABCC1P33527 1531 aa20.79■□□□□ 0.92
C1orf43-206ENST00000368521 PELP1Q8IZL8 1130 aaKnown RBP20.79■□□□□ 0.92
C1orf43-206ENST00000368521 RALGAPBQ86X10 1494 aa20.78■□□□□ 0.92
C1orf43-206ENST00000368521 RTEL1-TNFRSF6BF6WH68 1400 aa20.78■□□□□ 0.92
C1orf43-206ENST00000368521 KCNH8Q96L42 1107 aa20.78■□□□□ 0.92
C1orf43-206ENST00000368521 IQGAP3Q86VI3 1631 aa20.77■□□□□ 0.92
C1orf43-206ENST00000368521 ATP10AO60312 1499 aa20.77■□□□□ 0.92
C1orf43-206ENST00000368521 WDR7Q9Y4E6 1490 aa20.73■□□□□ 0.91
C1orf43-206ENST00000368521 KDM5CP41229 1560 aa20.71■□□□□ 0.91
C1orf43-206ENST00000368521 C11orf95C9JLR9 678 aaPredicted RBP20.7■□□□□ 0.9
C1orf43-206ENST00000368521 ABCA9Q8IUA7 1624 aa20.69■□□□□ 0.9
C1orf43-206ENST00000368521 USP47Q96K76 1375 aa20.69■□□□□ 0.9
C1orf43-206ENST00000368521 KIF7Q2M1P5 1343 aa20.68■□□□□ 0.9
C1orf43-206ENST00000368521 CCDC144AA2RUR9 1427 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms