RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 ZHX1Q9UKY1 873 aaPredicted RBP14.01□□□□□ -0.17
CDC42BPA-205ENST00000366769 BAZ1BQ9UIG0 1483 aaKnown RBP14.01□□□□□ -0.17
CDC42BPA-205ENST00000366769 FAM43AQ8N2R8 423 aa14□□□□□ -0.17
CDC42BPA-205ENST00000366769 TCERG1O14776 1098 aaKnown RBP13.98□□□□□ -0.17
CDC42BPA-205ENST00000366769 MSH5O43196 834 aa13.98□□□□□ -0.17
CDC42BPA-205ENST00000366769 PAXIP1Q6ZW49 1069 aaPredicted RBP13.98□□□□□ -0.17
CDC42BPA-205ENST00000366769 KAT6BQ8WYB5 2073 aa13.98□□□□□ -0.17
CDC42BPA-205ENST00000366769 BCL11BQ9C0K0 894 aaPredicted RBP13.98□□□□□ -0.17
CDC42BPA-205ENST00000366769 CEP162Q5TB80 1403 aa13.97□□□□□ -0.17
CDC42BPA-205ENST00000366769 GNL2Q13823 731 aaKnown RBP13.96□□□□□ -0.17
CDC42BPA-205ENST00000366769 SETQ01105 290 aaPredicted RBP13.96□□□□□ -0.17
CDC42BPA-205ENST00000366769 NEUROD2Q15784 382 aa13.96□□□□□ -0.17
CDC42BPA-205ENST00000366769 TPM2P07951 284 aa13.95□□□□□ -0.18
CDC42BPA-205ENST00000366769 E9PSI1 815 aa13.93□□□□□ -0.18
CDC42BPA-205ENST00000366769 CHMP4AQ9BY43 222 aa13.93□□□□□ -0.18
CDC42BPA-205ENST00000366769 R3HCC1Q9Y3T6 440 aaKnown RBP13.92□□□□□ -0.18
CDC42BPA-205ENST00000366769 FOXD4L5Q5VV16 416 aaPredicted RBP13.92□□□□□ -0.18
CDC42BPA-205ENST00000366769 FOXD4L4Q8WXT5 416 aaPredicted RBP13.92□□□□□ -0.18
CDC42BPA-205ENST00000366769 PATL2C9JE40 543 aaKnown RBP13.91□□□□□ -0.18
CDC42BPA-205ENST00000366769 BBXQ8WY36 941 aaPredicted RBP13.91□□□□□ -0.18
CDC42BPA-205ENST00000366769 CCER2I3L3R5 266 aa13.91□□□□□ -0.18
CDC42BPA-205ENST00000366769 DDX11L8A8MPP1 907 aa13.9□□□□□ -0.18
CDC42BPA-205ENST00000366769 CLIP1P30622 1438 aa13.9□□□□□ -0.18
CDC42BPA-205ENST00000366769 EEA1Q15075 1411 aa13.9□□□□□ -0.18
CDC42BPA-205ENST00000366769 GOLGA6L1Q8N7Z2 621 aa13.9□□□□□ -0.18
CDC42BPA-205ENST00000366769 EIF4G2P78344 907 aaKnown RBP eCLIP13.89□□□□□ -0.19
CDC42BPA-205ENST00000366769 PDE4AP27815 886 aa13.89□□□□□ -0.19
CDC42BPA-205ENST00000366769 CFAP53Q96M91 514 aa13.89□□□□□ -0.19
CDC42BPA-205ENST00000366769 PDIA4P13667 645 aaKnown RBP13.89□□□□□ -0.19
CDC42BPA-205ENST00000366769 NFKBIBQ15653 356 aa13.89□□□□□ -0.19
CDC42BPA-205ENST00000366769 MFAP1P55081 439 aaKnown RBP13.89□□□□□ -0.19
CDC42BPA-205ENST00000366769 SIN3AQ96ST3 1273 aa13.86□□□□□ -0.19
CDC42BPA-205ENST00000366769 ZNF592Q92610 1267 aa13.85□□□□□ -0.19
CDC42BPA-205ENST00000366769 RGL3Q3MIN7 710 aa13.84□□□□□ -0.19
CDC42BPA-205ENST00000366769 CREBRFQ8IUR6 639 aa13.84□□□□□ -0.19
CDC42BPA-205ENST00000366769 KRI1Q8N9T8 703 aaKnown RBP13.84□□□□□ -0.19
CDC42BPA-205ENST00000366769 PLCD3Q8N3E9 789 aa13.83□□□□□ -0.2
CDC42BPA-205ENST00000366769 MAPK8IP3Q9UPT6 1336 aa13.83□□□□□ -0.2
CDC42BPA-205ENST00000366769 ERICH4A6NGS2 130 aa13.83□□□□□ -0.2
CDC42BPA-205ENST00000366769 RBM25P49756 843 aaKnown RBP13.83□□□□□ -0.2
CDC42BPA-205ENST00000366769 KIAA1211Q6ZU35 1233 aa13.83□□□□□ -0.2
CDC42BPA-205ENST00000366769 RCAN3Q9UKA8 241 aa13.83□□□□□ -0.2
CDC42BPA-205ENST00000366769 ZNF526Q8TF50 670 aaPredicted RBP13.83□□□□□ -0.2
CDC42BPA-205ENST00000366769 UQCRHLA0A096LP55 91 aa13.83□□□□□ -0.2
CDC42BPA-205ENST00000366769 UQCRHP07919 91 aa13.83□□□□□ -0.2
CDC42BPA-205ENST00000366769 TAF7LQ5H9L4 462 aa13.82□□□□□ -0.2
CDC42BPA-205ENST00000366769 MAP7D2Q96T17 732 aa13.82□□□□□ -0.2
CDC42BPA-205ENST00000366769 WWC1Q8IX03 1113 aa13.82□□□□□ -0.2
CDC42BPA-205ENST00000366769 FRAT2O75474 233 aaPredicted RBP13.82□□□□□ -0.2
CDC42BPA-205ENST00000366769 SOX12O15370 315 aa13.81□□□□□ -0.2
CDC42BPA-205ENST00000366769 APBB1O00213 710 aa13.81□□□□□ -0.2
CDC42BPA-205ENST00000366769 CSPP1Q1MSJ5 1256 aa13.8□□□□□ -0.2
CDC42BPA-205ENST00000366769 SYAP1Q96A49 352 aaPredicted RBP13.8□□□□□ -0.2
CDC42BPA-205ENST00000366769 TSPY4P0CV99 314 aa13.8□□□□□ -0.2
CDC42BPA-205ENST00000366769 TSPY10P0CW01 314 aa13.8□□□□□ -0.2
CDC42BPA-205ENST00000366769 CCAR2Q8N163 923 aaKnown RBP13.8□□□□□ -0.2
CDC42BPA-205ENST00000366769 KNSTRNQ9Y448 316 aa13.79□□□□□ -0.2
CDC42BPA-205ENST00000366769 CGNQ9P2M7 1197 aaKnown RBP13.79□□□□□ -0.2
CDC42BPA-205ENST00000366769 TEX35Q5T0J7 233 aa13.79□□□□□ -0.2
CDC42BPA-205ENST00000366769 MCCP23508 829 aa13.78□□□□□ -0.2
CDC42BPA-205ENST00000366769 U2SURPO15042 1029 aaKnown RBP13.78□□□□□ -0.2
CDC42BPA-205ENST00000366769 NOM1Q5C9Z4 860 aaKnown RBP13.78□□□□□ -0.2
CDC42BPA-205ENST00000366769 NASPP49321 788 aaPredicted RBP13.78□□□□□ -0.2
CDC42BPA-205ENST00000366769 CCDC66A2RUB6 948 aa13.77□□□□□ -0.2
CDC42BPA-205ENST00000366769 NOL8Q76FK4 1167 aaKnown RBP13.77□□□□□ -0.2
CDC42BPA-205ENST00000366769 MTERF4Q7Z6M4 381 aaKnown RBP13.77□□□□□ -0.2
CDC42BPA-205ENST00000366769 CC2D1BQ5T0F9 858 aaKnown RBP13.77□□□□□ -0.21
CDC42BPA-205ENST00000366769 SCRIBQ14160 1630 aa13.77□□□□□ -0.21
CDC42BPA-205ENST00000366769 CALD1Q05682 793 aaKnown RBP13.76□□□□□ -0.21
CDC42BPA-205ENST00000366769 ZNF330Q9Y3S2 320 aaPredicted RBP13.75□□□□□ -0.21
CDC42BPA-205ENST00000366769 VPS53Q5VIR6 699 aa13.74□□□□□ -0.21
CDC42BPA-205ENST00000366769 CEP89Q96ST8 783 aa13.74□□□□□ -0.21
CDC42BPA-205ENST00000366769 CHMP4BQ9H444 224 aaKnown RBP13.74□□□□□ -0.21
CDC42BPA-205ENST00000366769 RRP7BPQ9NSQ0 103 aa13.74□□□□□ -0.21
CDC42BPA-205ENST00000366769 TNNT1P13805 278 aa13.73□□□□□ -0.21
CDC42BPA-205ENST00000366769 TRERF1Q96PN7 1200 aa13.73□□□□□ -0.21
CDC42BPA-205ENST00000366769 POGKQ9P215 609 aa13.73□□□□□ -0.21
CDC42BPA-205ENST00000366769 RASSF8Q8NHQ8 419 aa13.73□□□□□ -0.21
CDC42BPA-205ENST00000366769 PHF14O94880 888 aa13.73□□□□□ -0.21
CDC42BPA-205ENST00000366769 NUDCQ9Y266 331 aa13.73□□□□□ -0.21
CDC42BPA-205ENST00000366769 TAF3Q5VWG9 929 aa13.72□□□□□ -0.21
CDC42BPA-205ENST00000366769 HSP90B1P14625 803 aaKnown RBP13.72□□□□□ -0.21
CDC42BPA-205ENST00000366769 FOXD4L6Q3SYB3 417 aaPredicted RBP13.71□□□□□ -0.21
CDC42BPA-205ENST00000366769 FOXD4L3Q6VB84 417 aaPredicted RBP13.71□□□□□ -0.21
CDC42BPA-205ENST00000366769 EXOC6Q8TAG9 804 aa13.71□□□□□ -0.22
CDC42BPA-205ENST00000366769 IRX3P78415 501 aaPredicted RBP13.71□□□□□ -0.22
CDC42BPA-205ENST00000366769 VGLL3A8MV65 326 aa13.7□□□□□ -0.22
CDC42BPA-205ENST00000366769 FAM161AQ3B820 660 aa13.7□□□□□ -0.22
CDC42BPA-205ENST00000366769 DDX49Q9Y6V7 483 aaKnown RBP13.7□□□□□ -0.22
CDC42BPA-205ENST00000366769 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.7□□□□□ -0.22
CDC42BPA-205ENST00000366769 ZFP91Q96JP5 570 aaPredicted RBP13.7□□□□□ -0.22
CDC42BPA-205ENST00000366769 CNKSR2Q8WXI2 1034 aa13.7□□□□□ -0.22
CDC42BPA-205ENST00000366769 HSP90AB3PQ58FF7 597 aa13.7□□□□□ -0.22
CDC42BPA-205ENST00000366769 PLIN1O60240 522 aa13.69□□□□□ -0.22
CDC42BPA-205ENST00000366769 CWC15Q9P013 229 aaKnown RBP13.69□□□□□ -0.22
CDC42BPA-205ENST00000366769 GPS2Q13227 327 aa13.69□□□□□ -0.22
CDC42BPA-205ENST00000366769 CCDC39Q9UFE4 941 aa13.68□□□□□ -0.22
CDC42BPA-205ENST00000366769 TPM4P67936 248 aa13.68□□□□□ -0.22
CDC42BPA-205ENST00000366769 GPATCH11Q8N954 259 aa13.68□□□□□ -0.22
CDC42BPA-205ENST00000366769 PES1O00541 588 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms