RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 CAMK2BQ13554 666 aa8.07□□□□□ -1.12
RNU6-28P-201ENST00000362378 DDX27Q96GQ7 796 aaKnown RBP8.07□□□□□ -1.12
RNU6-28P-201ENST00000362378 TESPA1A2RU30 521 aaPredicted RBP8.06□□□□□ -1.12
RNU6-28P-201ENST00000362378 MAMSTRQ6ZN01 415 aa8.06□□□□□ -1.12
RNU6-28P-201ENST00000362378 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.06□□□□□ -1.12
RNU6-28P-201ENST00000362378 SEMA3EO15041 775 aa8.04□□□□□ -1.12
RNU6-28P-201ENST00000362378 GALR2O43603 387 aaPredicted RBP8.04□□□□□ -1.12
RNU6-28P-201ENST00000362378 TRIM35Q9UPQ4 493 aa8.04□□□□□ -1.12
RNU6-28P-201ENST00000362378 GPHNQ9NQX3 736 aaPredicted RBP8.02□□□□□ -1.13
RNU6-28P-201ENST00000362378 MMRN1Q13201 1228 aa8.01□□□□□ -1.13
RNU6-28P-201ENST00000362378 PPP1R15BQ5SWA1 713 aa7.99□□□□□ -1.13
RNU6-28P-201ENST00000362378 SMYD5Q6GMV2 418 aa7.99□□□□□ -1.13
RNU6-28P-201ENST00000362378 ZC3H15Q8WU90 426 aaKnown RBP7.99□□□□□ -1.13
RNU6-28P-201ENST00000362378 DPY19L2Q6NUT2 758 aa7.98□□□□□ -1.13
RNU6-28P-201ENST00000362378 PDCD7Q8N8D1 485 aaKnown RBP7.98□□□□□ -1.13
RNU6-28P-201ENST00000362378 ATN1P54259 1190 aaPredicted RBP7.97□□□□□ -1.13
RNU6-28P-201ENST00000362378 IER5LQ5T953 404 aa7.97□□□□□ -1.13
RNU6-28P-201ENST00000362378 MICALL2Q8IY33 904 aa7.97□□□□□ -1.13
RNU6-28P-201ENST00000362378 ATMINO43313 823 aaPredicted RBP7.96□□□□□ -1.14
RNU6-28P-201ENST00000362378 IRX5P78411 483 aaPredicted RBP7.96□□□□□ -1.14
RNU6-28P-201ENST00000362378 ASTLQ6HA08 431 aaPredicted RBP7.96□□□□□ -1.14
RNU6-28P-201ENST00000362378 TMEM121BQ9BXQ6 578 aaPredicted RBP7.96□□□□□ -1.14
RNU6-28P-201ENST00000362378 POTEJP0CG39 1038 aa7.94□□□□□ -1.14
RNU6-28P-201ENST00000362378 OCEL1Q9H607 264 aa7.94□□□□□ -1.14
RNU6-28P-201ENST00000362378 FOXK1P85037 733 aa7.93□□□□□ -1.14
RNU6-28P-201ENST00000362378 DSG2Q14126 1118 aa7.93□□□□□ -1.14
RNU6-28P-201ENST00000362378 TMEM132AQ24JP5 1023 aa7.93□□□□□ -1.14
RNU6-28P-201ENST00000362378 ZMYND10O75800 440 aa7.92□□□□□ -1.14
RNU6-28P-201ENST00000362378 SPNS2Q8IVW8 549 aa7.92□□□□□ -1.14
RNU6-28P-201ENST00000362378 TMC2Q8TDI7 906 aa7.92□□□□□ -1.14
RNU6-28P-201ENST00000362378 EMILIN3Q9NT22 766 aa7.92□□□□□ -1.14
RNU6-28P-201ENST00000362378 BOLA1Q9Y3E2 137 aa7.92□□□□□ -1.14
RNU6-28P-201ENST00000362378 SPDYE16A6NNV3 312 aaPredicted RBP7.91□□□□□ -1.14
RNU6-28P-201ENST00000362378 KIF3CO14782 793 aa7.9□□□□□ -1.14
RNU6-28P-201ENST00000362378 PDIA6Q15084 440 aa7.9□□□□□ -1.14
RNU6-28P-201ENST00000362378 SCUBE2Q9NQ36 999 aa7.9□□□□□ -1.14
RNU6-28P-201ENST00000362378 DPYSL4O14531 572 aa7.89□□□□□ -1.15
RNU6-28P-201ENST00000362378 MLLT3P42568 568 aaPredicted RBP7.89□□□□□ -1.15
RNU6-28P-201ENST00000362378 PLCG2P16885 1265 aa7.88□□□□□ -1.15
RNU6-28P-201ENST00000362378 BRPF1P55201 1214 aaPredicted RBP7.88□□□□□ -1.15
RNU6-28P-201ENST00000362378 BARGINQ6ZT62 677 aa7.88□□□□□ -1.15
RNU6-28P-201ENST00000362378 PLPP6Q8IY26 295 aa7.88□□□□□ -1.15
RNU6-28P-201ENST00000362378 PELP1Q8IZL8 1130 aaKnown RBP7.88□□□□□ -1.15
RNU6-28P-201ENST00000362378 SLC24A3Q9HC58 644 aa7.88□□□□□ -1.15
RNU6-28P-201ENST00000362378 C2orf72A6NCS6 295 aa7.87□□□□□ -1.15
RNU6-28P-201ENST00000362378 C7P10643 843 aa7.87□□□□□ -1.15
RNU6-28P-201ENST00000362378 L3MBTL3Q96JM7 780 aaPredicted RBP7.87□□□□□ -1.15
RNU6-28P-201ENST00000362378 G3V3G9 751 aa7.86□□□□□ -1.15
RNU6-28P-201ENST00000362378 RBM26Q5T8P6 1007 aaKnown RBP7.86□□□□□ -1.15
RNU6-28P-201ENST00000362378 GTF3C3Q9Y5Q9 886 aa7.86□□□□□ -1.15
RNU6-28P-201ENST00000362378 METRNQ9UJH8 293 aa7.85□□□□□ -1.15
RNU6-28P-201ENST00000362378 GPIHBP1Q8IV16 184 aa7.83□□□□□ -1.16
RNU6-28P-201ENST00000362378 SLC39A7Q92504 469 aa7.83□□□□□ -1.16
RNU6-28P-201ENST00000362378 NEUROD2Q15784 382 aa7.81□□□□□ -1.16
RNU6-28P-201ENST00000362378 TMEM92Q6UXU6 159 aa7.81□□□□□ -1.16
RNU6-28P-201ENST00000362378 COLQQ9Y215 455 aaPredicted RBP7.81□□□□□ -1.16
RNU6-28P-201ENST00000362378 SEC24BO95487 1268 aa7.8□□□□□ -1.16
RNU6-28P-201ENST00000362378 MAP3K9P80192 1104 aa7.8□□□□□ -1.16
RNU6-28P-201ENST00000362378 OXER1Q8TDS5 423 aa7.8□□□□□ -1.16
RNU6-28P-201ENST00000362378 AK7Q96M32 723 aa7.8□□□□□ -1.16
RNU6-28P-201ENST00000362378 POTEFA5A3E0 1075 aa7.78□□□□□ -1.16
RNU6-28P-201ENST00000362378 PTGER2P43116 358 aa7.78□□□□□ -1.16
RNU6-28P-201ENST00000362378 ERICH6Q7L0X2 663 aa7.78□□□□□ -1.16
RNU6-28P-201ENST00000362378 GPR37O15354 613 aa7.77□□□□□ -1.17
RNU6-28P-201ENST00000362378 KRI1Q8N9T8 703 aaKnown RBP7.76□□□□□ -1.17
RNU6-28P-201ENST00000362378 TIMELESSQ9UNS1 1208 aa7.76□□□□□ -1.17
RNU6-28P-201ENST00000362378 OSBPP22059 807 aa7.75□□□□□ -1.17
RNU6-28P-201ENST00000362378 UPF1Q92900 1129 aaKnown RBP eCLIP7.75□□□□□ -1.17
RNU6-28P-201ENST00000362378 GRXCR2A6NFK2 248 aa7.74□□□□□ -1.17
RNU6-28P-201ENST00000362378 TBC1D12O60347 775 aa7.73□□□□□ -1.17
RNU6-28P-201ENST00000362378 PTCD2Q8WV60 388 aaKnown RBP7.73□□□□□ -1.17
RNU6-28P-201ENST00000362378 TRIM66O15016 1216 aa7.72□□□□□ -1.17
RNU6-28P-201ENST00000362378 EVI5O60447 810 aa7.71□□□□□ -1.18
RNU6-28P-201ENST00000362378 SLC34A2O95436 690 aa7.71□□□□□ -1.18
RNU6-28P-201ENST00000362378 MINK1Q8N4C8 1332 aaPredicted RBP7.71□□□□□ -1.18
RNU6-28P-201ENST00000362378 NUTM2FA1L443 756 aa7.7□□□□□ -1.18
RNU6-28P-201ENST00000362378 C3orf67Q6ZVT6 689 aa7.7□□□□□ -1.18
RNU6-28P-201ENST00000362378 DAXXQ9UER7 740 aaPredicted RBP7.7□□□□□ -1.18
RNU6-28P-201ENST00000362378 PDE4DQ08499 809 aa7.69□□□□□ -1.18
RNU6-28P-201ENST00000362378 DDX12PQ92771 950 aa7.69□□□□□ -1.18
RNU6-28P-201ENST00000362378 ANO8Q9HCE9 1232 aaPredicted RBP7.69□□□□□ -1.18
RNU6-28P-201ENST00000362378 MAP2K5Q13163 448 aa7.68□□□□□ -1.18
RNU6-28P-201ENST00000362378 GPBP1L1Q9HC44 474 aaPredicted RBP7.68□□□□□ -1.18
RNU6-28P-201ENST00000362378 GNPATO15228 680 aa7.67□□□□□ -1.18
RNU6-28P-201ENST00000362378 ST18O60284 1047 aa7.67□□□□□ -1.18
RNU6-28P-201ENST00000362378 FCHSD2O94868 740 aa7.67□□□□□ -1.18
RNU6-28P-201ENST00000362378 PRIM1P49642 420 aaKnown RBP7.67□□□□□ -1.18
RNU6-28P-201ENST00000362378 HIC1Q14526 733 aa7.67□□□□□ -1.18
RNU6-28P-201ENST00000362378 KDM4CQ9H3R0 1056 aa7.67□□□□□ -1.18
RNU6-28P-201ENST00000362378 ZNF316A6NFI3 1004 aaPredicted RBP7.66□□□□□ -1.18
RNU6-28P-201ENST00000362378 IRF6O14896 467 aa7.66□□□□□ -1.18
RNU6-28P-201ENST00000362378 PTGDRQ13258 359 aa7.64□□□□□ -1.19
RNU6-28P-201ENST00000362378 CCDC102AQ96A19 550 aa7.64□□□□□ -1.19
RNU6-28P-201ENST00000362378 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.64□□□□□ -1.19
RNU6-28P-201ENST00000362378 PHF14O94880 888 aa7.63□□□□□ -1.19
RNU6-28P-201ENST00000362378 AMHR2Q16671 573 aa7.63□□□□□ -1.19
RNU6-28P-201ENST00000362378 EPAS1Q99814 870 aa7.63□□□□□ -1.19
RNU6-28P-201ENST00000362378 FECHP22830 423 aa7.62□□□□□ -1.19
RNU6-28P-201ENST00000362378 C14orf37Q86TY3 774 aa7.62□□□□□ -1.19
RNU6-28P-201ENST00000362378 EN1Q05925 392 aaPredicted RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms