RNA–Protein interactions for RNA: ENST00000361574.9

R3HDM4-201, Transcript of R3H domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene R3HDM4, Length 1,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-201ENST00000361574 CHD1O14646 1710 aa33.11■■■□□ 2.89
R3HDM4-201ENST00000361574 TONSLQ96HA7 1378 aa33.1■■■□□ 2.89
R3HDM4-201ENST00000361574 SHROOM2Q13796 1616 aa33.09■■■□□ 2.89
R3HDM4-201ENST00000361574 CAMSAP2Q08AD1 1489 aa33.09■■■□□ 2.89
R3HDM4-201ENST00000361574 CHIC2Q9UKJ5 165 aa33.08■■■□□ 2.89
R3HDM4-201ENST00000361574 ADGBQ8N7X0 1667 aa33.07■■■□□ 2.88
R3HDM4-201ENST00000361574 KDM5BQ9UGL1 1544 aa33.07■■■□□ 2.88
R3HDM4-201ENST00000361574 ATP10BO94823 1461 aa33.07■■■□□ 2.88
R3HDM4-201ENST00000361574 CROCC2H7BZ55 1655 aa33.07■■■□□ 2.88
R3HDM4-201ENST00000361574 ABCC10Q5T3U5 1492 aa33.04■■■□□ 2.88
R3HDM4-201ENST00000361574 ADGRL2O95490 1459 aa33.03■■■□□ 2.88
R3HDM4-201ENST00000361574 CDC42BPAQ5VT25 1732 aa33.01■■■□□ 2.88
R3HDM4-201ENST00000361574 ZNF644Q9H582 1327 aaPredicted RBP32.99■■■□□ 2.87
R3HDM4-201ENST00000361574 CFDP1Q9UEE9 299 aaPredicted RBP32.97■■■□□ 2.87
R3HDM4-201ENST00000361574 PTPRGP23470 1445 aa32.95■■■□□ 2.87
R3HDM4-201ENST00000361574 PLEKHD1A6NEE1 506 aa32.94■■■□□ 2.86
R3HDM4-201ENST00000361574 MPHOSPH9Q99550 1183 aa32.93■■■□□ 2.86
R3HDM4-201ENST00000361574 NCOA1Q15788 1441 aa32.92■■■□□ 2.86
R3HDM4-201ENST00000361574 SHANK2Q9UPX8 1470 aa32.92■■■□□ 2.86
R3HDM4-201ENST00000361574 TRIM52Q96A61 297 aa32.89■■■□□ 2.86
R3HDM4-201ENST00000361574 ANKRD30BQ9BXX2 1392 aa32.84■■■□□ 2.85
R3HDM4-201ENST00000361574 ARHGEF5Q12774 1597 aa32.83■■■□□ 2.85
R3HDM4-201ENST00000361574 YTHDC1Q96MU7 727 aaKnown RBP32.83■■■□□ 2.85
R3HDM4-201ENST00000361574 RPRD2Q5VT52 1461 aaKnown RBP32.8■■■□□ 2.84
R3HDM4-201ENST00000361574 ANKRD30AQ9BXX3 1397 aa32.79■■■□□ 2.84
R3HDM4-201ENST00000361574 PZPP20742 1482 aa32.79■■■□□ 2.84
R3HDM4-201ENST00000361574 GTF3C3Q9Y5Q9 886 aa32.78■■■□□ 2.84
R3HDM4-201ENST00000361574 PREX2Q70Z35 1606 aa32.77■■■□□ 2.84
R3HDM4-201ENST00000361574 CLASP1Q7Z460 1538 aa32.76■■■□□ 2.83
R3HDM4-201ENST00000361574 ABCC2Q92887 1545 aa32.74■■■□□ 2.83
R3HDM4-201ENST00000361574 CDC42BPBQ9Y5S2 1711 aa32.72■■■□□ 2.83
R3HDM4-201ENST00000361574 TEX14Q8IWB6 1497 aa32.7■■■□□ 2.82
R3HDM4-201ENST00000361574 C9orf84Q5VXU9 1444 aa32.69■■■□□ 2.82
R3HDM4-201ENST00000361574 MBD5Q9P267 1494 aa32.68■■■□□ 2.82
R3HDM4-201ENST00000361574 KDM5DQ9BY66 1539 aa32.67■■■□□ 2.82
R3HDM4-201ENST00000361574 ZNF777Q9ULD5 760 aaPredicted RBP32.67■■■□□ 2.82
R3HDM4-201ENST00000361574 ANKRD50Q9ULJ7 1429 aa32.67■■■□□ 2.82
R3HDM4-201ENST00000361574 DDX10Q13206 875 aaKnown RBP32.66■■■□□ 2.82
R3HDM4-201ENST00000361574 SAMD9LQ8IVG5 1584 aa32.66■■■□□ 2.82
R3HDM4-201ENST00000361574 ERCC6L2Q5T890 1561 aa32.65■■■□□ 2.82
R3HDM4-201ENST00000361574 SLC4A1APQ9BWU0 796 aaKnown RBP32.65■■■□□ 2.82
R3HDM4-201ENST00000361574 UHRF1BP1LA0JNW5 1464 aa32.63■■■□□ 2.81
R3HDM4-201ENST00000361574 KIAA1107Q9UPP5 1409 aa32.62■■■□□ 2.81
R3HDM4-201ENST00000361574 L3MBTL2Q969R5 705 aa32.61■■■□□ 2.81
R3HDM4-201ENST00000361574 RSPH4AQ5TD94 716 aa32.61■■■□□ 2.81
R3HDM4-201ENST00000361574 MAST1Q9Y2H9 1570 aa32.59■■■□□ 2.81
R3HDM4-201ENST00000361574 CCDC141Q6ZP82 1450 aa32.59■■■□□ 2.81
R3HDM4-201ENST00000361574 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.58■■■□□ 2.815e-6■■■■□ 23.9
R3HDM4-201ENST00000361574 FOXD1Q16676 465 aa32.57■■■□□ 2.8
R3HDM4-201ENST00000361574 TTC37Q6PGP7 1564 aa32.56■■■□□ 2.8
R3HDM4-201ENST00000361574 MYO5CQ9NQX4 1742 aa32.54■■■□□ 2.8
R3HDM4-201ENST00000361574 TSPY4P0CV99 314 aa32.54■■■□□ 2.8
R3HDM4-201ENST00000361574 TSPY10P0CW01 314 aa32.54■■■□□ 2.8
R3HDM4-201ENST00000361574 CCER2I3L3R5 266 aa32.53■■■□□ 2.8
R3HDM4-201ENST00000361574 HIRIP3Q9BW71 556 aaPredicted RBP32.51■■■□□ 2.8
R3HDM4-201ENST00000361574 PLEKHH2Q8IVE3 1493 aa32.51■■■□□ 2.79
R3HDM4-201ENST00000361574 ZCCHC11Q5TAX3 1644 aaKnown RBP32.48■■■□□ 2.79
R3HDM4-201ENST00000361574 KIF15Q9NS87 1388 aa32.48■■■□□ 2.79
R3HDM4-201ENST00000361574 EIF4G2P78344 907 aaKnown RBP eCLIP32.47■■■□□ 2.79
R3HDM4-201ENST00000361574 HSPA5P11021 654 aaKnown RBP32.46■■■□□ 2.79
R3HDM4-201ENST00000361574 ARHGAP5Q13017 1502 aa32.44■■■□□ 2.78
R3HDM4-201ENST00000361574 HNRNPMP52272 730 aaKnown RBP eCLIP32.44■■■□□ 2.78
R3HDM4-201ENST00000361574 PLXNC1O60486 1568 aa32.43■■■□□ 2.78
R3HDM4-201ENST00000361574 SYCP2Q9BX26 1530 aa32.43■■■□□ 2.78
R3HDM4-201ENST00000361574 ANP32CO43423 234 aa32.42■■■□□ 2.78
R3HDM4-201ENST00000361574 POLR1AO95602 1720 aaPredicted RBP32.41■■■□□ 2.78
R3HDM4-201ENST00000361574 PKD2Q13563 968 aa32.41■■■□□ 2.78
R3HDM4-201ENST00000361574 SPATA31E1Q6ZUB1 1445 aa32.4■■■□□ 2.78
R3HDM4-201ENST00000361574 NUP155O75694 1391 aa32.4■■■□□ 2.78
R3HDM4-201ENST00000361574 NBPF8Q3BBV2 869 aa32.4■■■□□ 2.78
R3HDM4-201ENST00000361574 UNC13BO14795 1591 aa32.38■■■□□ 2.77
R3HDM4-201ENST00000361574 ARHGEF12Q9NZN5 1544 aa32.37■■■□□ 2.77
R3HDM4-201ENST00000361574 WASHC2AQ641Q2 1341 aa32.36■■■□□ 2.77
R3HDM4-201ENST00000361574 PLCH2O75038 1416 aa32.36■■■□□ 2.77
R3HDM4-201ENST00000361574 ARAP3Q8WWN8 1544 aa32.35■■■□□ 2.77
R3HDM4-201ENST00000361574 KCNH8Q96L42 1107 aa32.34■■■□□ 2.77
R3HDM4-201ENST00000361574 UHRF1BP1Q6BDS2 1440 aa32.34■■■□□ 2.77
R3HDM4-201ENST00000361574 FAM135AQ9P2D6 1515 aa32.3■■■□□ 2.76
R3HDM4-201ENST00000361574 CNTLNQ9NXG0 1405 aa32.26■■■□□ 2.75
R3HDM4-201ENST00000361574 ABCC1P33527 1531 aa32.26■■■□□ 2.75
R3HDM4-201ENST00000361574 CCDC7Q96M83 1385 aa32.26■■■□□ 2.75
R3HDM4-201ENST00000361574 DUOX2Q9NRD8 1548 aa32.25■■■□□ 2.75
R3HDM4-201ENST00000361574 IQGAP3Q86VI3 1631 aa32.24■■■□□ 2.75
R3HDM4-201ENST00000361574 MAGI2Q86UL8 1455 aa32.22■■■□□ 2.75
R3HDM4-201ENST00000361574 RALGAPBQ86X10 1494 aa32.21■■■□□ 2.75
R3HDM4-201ENST00000361574 ERBINQ96RT1 1412 aa32.2■■■□□ 2.74
R3HDM4-201ENST00000361574 EFCAB2Q5VUJ9 269 aa32.19■■■□□ 2.74
R3HDM4-201ENST00000361574 KDM5CP41229 1560 aa32.17■■■□□ 2.74
R3HDM4-201ENST00000361574 C11orf95C9JLR9 678 aaPredicted RBP32.14■■■□□ 2.74
R3HDM4-201ENST00000361574 WDR7Q9Y4E6 1490 aa32.12■■■□□ 2.73
R3HDM4-201ENST00000361574 RTEL1-TNFRSF6BF6WH68 1400 aa32.12■■■□□ 2.73
R3HDM4-201ENST00000361574 ATP10AO60312 1499 aa32.11■■■□□ 2.73
R3HDM4-201ENST00000361574 PELP1Q8IZL8 1130 aaKnown RBP32.1■■■□□ 2.73
R3HDM4-201ENST00000361574 ABCA9Q8IUA7 1624 aa32.09■■■□□ 2.73
R3HDM4-201ENST00000361574 ARID4BQ4LE39 1312 aaPredicted RBP32.09■■■□□ 2.73
R3HDM4-201ENST00000361574 KIF7Q2M1P5 1343 aa32.07■■■□□ 2.73
R3HDM4-201ENST00000361574 USP47Q96K76 1375 aa32.07■■■□□ 2.72
R3HDM4-201ENST00000361574 PLA2R1Q13018 1463 aa32.05■■■□□ 2.72
R3HDM4-201ENST00000361574 TRAPPC8Q9Y2L5 1435 aa32.05■■■□□ 2.72
R3HDM4-201ENST00000361574 BCORL1Q5H9F3 1711 aa32.04■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms