RNA–Protein interactions for RNA: ENST00000361368.6

SMURF1-202, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMURF1, Length 5,581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-202ENST00000361368 EIF4G1Q04637 1599 aaKnown RBP25.86■■□□□ 1.73
SMURF1-202ENST00000361368 IPO8O15397 1037 aaKnown RBP25.86■■□□□ 1.73
SMURF1-202ENST00000361368 GGT6Q6P531 493 aa25.83■■□□□ 1.73
SMURF1-202ENST00000361368 GNL2Q13823 731 aaKnown RBP25.82■■□□□ 1.72
SMURF1-202ENST00000361368 CSB-PGBD3P0DP91 1061 aa25.82■■□□□ 1.72
SMURF1-202ENST00000361368 CHAF1AQ13111 956 aaPredicted RBP25.8■■□□□ 1.72
SMURF1-202ENST00000361368 SAFB2Q14151 953 aaKnown RBP eCLIP25.8■■□□□ 1.72
SMURF1-202ENST00000361368 CARMIL1Q5VZK9 1371 aa25.79■■□□□ 1.72
SMURF1-202ENST00000361368 KIAA1211Q6ZU35 1233 aa25.79■■□□□ 1.72
SMURF1-202ENST00000361368 CARMIL2Q6F5E8 1435 aa25.79■■□□□ 1.72
SMURF1-202ENST00000361368 PAK3O75914 559 aaPredicted RBP25.76■■□□□ 1.71
SMURF1-202ENST00000361368 STK26Q9P289 416 aa25.76■■□□□ 1.71
SMURF1-202ENST00000361368 NAP1L5Q96NT1 182 aaPredicted RBP25.74■■□□□ 1.71
SMURF1-202ENST00000361368 HDAC5Q9UQL6 1122 aa25.74■■□□□ 1.71
SMURF1-202ENST00000361368 KTN1Q86UP2 1357 aaKnown RBP25.74■■□□□ 1.71
SMURF1-202ENST00000361368 NOP58Q9Y2X3 529 aaKnown RBP25.73■■□□□ 1.71
SMURF1-202ENST00000361368 CUX2O14529 1486 aa25.71■■□□□ 1.71
SMURF1-202ENST00000361368 HTATSF1O43719 755 aaKnown RBP25.69■■□□□ 1.7
SMURF1-202ENST00000361368 KIAA2012Q0VF49 1180 aa25.69■■□□□ 1.7
SMURF1-202ENST00000361368 EFCAB2Q5VUJ9 269 aa25.69■■□□□ 1.7
SMURF1-202ENST00000361368 DRC7Q8IY82 874 aa25.69■■□□□ 1.7
SMURF1-202ENST00000361368 SPAG9O60271 1321 aaKnown RBP25.67■■□□□ 1.7
SMURF1-202ENST00000361368 PKD2Q13563 968 aa25.66■■□□□ 1.7
SMURF1-202ENST00000361368 ZNF330Q9Y3S2 320 aaPredicted RBP25.66■■□□□ 1.7
SMURF1-202ENST00000361368 PTMSP20962 102 aa25.66■■□□□ 1.7
SMURF1-202ENST00000361368 EIF3AQ14152 1382 aaKnown RBP25.66■■□□□ 1.7
SMURF1-202ENST00000361368 BAZ1AQ9NRL2 1556 aaPredicted RBP25.65■■□□□ 1.7
SMURF1-202ENST00000361368 STK31Q9BXU1 1019 aa25.65■■□□□ 1.7
SMURF1-202ENST00000361368 ARHGAP35Q9NRY4 1499 aa25.65■■□□□ 1.7
SMURF1-202ENST00000361368 CCER2I3L3R5 266 aa25.64■■□□□ 1.7
SMURF1-202ENST00000361368 U2AF1L5P0DN76 240 aaPredicted RBP25.64■■□□□ 1.7
SMURF1-202ENST00000361368 U2AF1Q01081 240 aaKnown RBP eCLIP25.64■■□□□ 1.7
SMURF1-202ENST00000361368 NCBP3Q53F19 620 aaKnown RBP25.64■■□□□ 1.69
SMURF1-202ENST00000361368 GORABQ5T7V8 394 aa25.63■■□□□ 1.69
SMURF1-202ENST00000361368 CCDC9Q9Y3X0 531 aaKnown RBP25.63■■□□□ 1.69
SMURF1-202ENST00000361368 EID1Q9Y6B2 187 aa25.63■■□□□ 1.69
SMURF1-202ENST00000361368 MSNP26038 577 aaKnown RBP25.62■■□□□ 1.69
SMURF1-202ENST00000361368 RWDD1Q9H446 243 aaPredicted RBP25.62■■□□□ 1.69
SMURF1-202ENST00000361368 GPATCH3Q96I76 525 aa25.62■■□□□ 1.69
SMURF1-202ENST00000361368 CCDC34Q96HJ3 373 aa25.61■■□□□ 1.69
SMURF1-202ENST00000361368 SETD5Q9C0A6 1442 aa25.6■■□□□ 1.69
SMURF1-202ENST00000361368 B4GALNT3Q6L9W6 998 aa25.59■■□□□ 1.69
SMURF1-202ENST00000361368 RALBP1Q15311 655 aa25.59■■□□□ 1.69
SMURF1-202ENST00000361368 TAF7LQ5H9L4 462 aa25.59■■□□□ 1.69
SMURF1-202ENST00000361368 APBB1O00213 710 aa25.58■■□□□ 1.69
SMURF1-202ENST00000361368 TERF2IPQ9NYB0 399 aa25.58■■□□□ 1.69
SMURF1-202ENST00000361368 ROCK2O75116 1388 aaKnown RBP25.58■■□□□ 1.68
SMURF1-202ENST00000361368 HSPA5P11021 654 aaKnown RBP25.57■■□□□ 1.68
SMURF1-202ENST00000361368 ANKRD30AQ9BXX3 1397 aa25.56■■□□□ 1.68
SMURF1-202ENST00000361368 ITPRIPQ8IWB1 547 aa25.55■■□□□ 1.68
SMURF1-202ENST00000361368 GBP4Q96PP9 640 aa25.55■■□□□ 1.68
SMURF1-202ENST00000361368 G3V3G9 751 aa25.54■■□□□ 1.68
SMURF1-202ENST00000361368 HMMRO75330 724 aa25.54■■□□□ 1.68
SMURF1-202ENST00000361368 DCAF8Q5TAQ9 597 aa25.54■■□□□ 1.68
SMURF1-202ENST00000361368 PDS5BQ9NTI5 1447 aa25.53■■□□□ 1.68
SMURF1-202ENST00000361368 TPM4P67936 248 aa25.52■■□□□ 1.68
SMURF1-202ENST00000361368 NUP155O75694 1391 aa25.51■■□□□ 1.67
SMURF1-202ENST00000361368 LMOD3Q0VAK6 560 aa25.51■■□□□ 1.67
SMURF1-202ENST00000361368 CHMP3Q9Y3E7 222 aa25.51■■□□□ 1.67
SMURF1-202ENST00000361368 SYAP1Q96A49 352 aaPredicted RBP25.5■■□□□ 1.67
SMURF1-202ENST00000361368 PMFBP1Q8TBY8 1022 aa25.49■■□□□ 1.67
SMURF1-202ENST00000361368 NGDNQ8NEJ9 315 aaKnown RBP25.48■■□□□ 1.67
SMURF1-202ENST00000361368 SPRYD3Q8NCJ5 442 aa25.47■■□□□ 1.67
SMURF1-202ENST00000361368 FMN1Q68DA7 1419 aa25.46■■□□□ 1.67
SMURF1-202ENST00000361368 RSPH4AQ5TD94 716 aa25.46■■□□□ 1.67
SMURF1-202ENST00000361368 KIF3BO15066 747 aa25.45■■□□□ 1.66
SMURF1-202ENST00000361368 NOC3LQ8WTT2 800 aaKnown RBP25.44■■□□□ 1.66
SMURF1-202ENST00000361368 RCAN3Q9UKA8 241 aa25.44■■□□□ 1.66
SMURF1-202ENST00000361368 AMPHP49418 695 aa25.42■■□□□ 1.66
SMURF1-202ENST00000361368 MPHOSPH9Q99550 1183 aa25.42■■□□□ 1.66
SMURF1-202ENST00000361368 CSPP1Q1MSJ5 1256 aa25.42■■□□□ 1.66
SMURF1-202ENST00000361368 HSP90B1P14625 803 aaKnown RBP25.42■■□□□ 1.66
SMURF1-202ENST00000361368 GTF2E1P29083 439 aaPredicted RBP25.41■■□□□ 1.66
SMURF1-202ENST00000361368 SMC4Q9NTJ3 1288 aa25.4■■□□□ 1.66
SMURF1-202ENST00000361368 WASHC2CQ9Y4E1 1318 aa25.39■■□□□ 1.66
SMURF1-202ENST00000361368 TRIM6-TRIM34B2RNG4 842 aa25.38■■□□□ 1.65
SMURF1-202ENST00000361368 RASSF8Q8NHQ8 419 aa25.38■■□□□ 1.65
SMURF1-202ENST00000361368 MYO15BQ96JP2 1530 aa25.38■■□□□ 1.65
SMURF1-202ENST00000361368 SOGA1O94964 1423 aa25.37■■□□□ 1.65
SMURF1-202ENST00000361368 VPS8Q8N3P4 1428 aa25.37■■□□□ 1.65
SMURF1-202ENST00000361368 FRAT2O75474 233 aaPredicted RBP25.36■■□□□ 1.65
SMURF1-202ENST00000361368 KIF3AQ9Y496 699 aa25.36■■□□□ 1.65
SMURF1-202ENST00000361368 TCERG1O14776 1098 aaKnown RBP25.34■■□□□ 1.65
SMURF1-202ENST00000361368 FOXD1Q16676 465 aa25.34■■□□□ 1.65
SMURF1-202ENST00000361368 SLC4A10Q6U841 1118 aa25.32■■□□□ 1.64
SMURF1-202ENST00000361368 CHMP4CQ96CF2 233 aa25.31■■□□□ 1.64
SMURF1-202ENST00000361368 PRM3Q9NNZ6 103 aa25.3■■□□□ 1.64
SMURF1-202ENST00000361368 RTN4Q9NQC3 1192 aaKnown RBP25.3■■□□□ 1.64
SMURF1-202ENST00000361368 MARCH6O60337 910 aa25.29■■□□□ 1.64
SMURF1-202ENST00000361368 TOMM22Q9NS69 142 aa25.29■■□□□ 1.64
SMURF1-202ENST00000361368 CEP89Q96ST8 783 aa25.27■■□□□ 1.64
SMURF1-202ENST00000361368 CENPJQ9HC77 1338 aaPredicted RBP25.26■■□□□ 1.63
SMURF1-202ENST00000361368 PDE3BQ13370 1112 aa25.25■■□□□ 1.63
SMURF1-202ENST00000361368 PHLDB1Q86UU1 1377 aa25.25■■□□□ 1.63
SMURF1-202ENST00000361368 LTV1Q96GA3 475 aaPredicted RBP25.25■■□□□ 1.63
SMURF1-202ENST00000361368 MFAP1P55081 439 aaKnown RBP25.25■■□□□ 1.63
SMURF1-202ENST00000361368 USP35Q9P2H5 1018 aa25.24■■□□□ 1.63
SMURF1-202ENST00000361368 TDRD9Q8NDG6 1382 aaKnown RBP25.24■■□□□ 1.63
SMURF1-202ENST00000361368 HNRNPMP52272 730 aaKnown RBP eCLIP25.23■■□□□ 1.635e-7■■■■□ 21.4
SMURF1-202ENST00000361368 NLRP13Q86W25 1043 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms