RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 FAM135AQ9P2D6 1515 aa10.85□□□□□ -0.67
CDC42SE2-201ENST00000360515 DIP2CQ9Y2E4 1556 aa10.85□□□□□ -0.67
CDC42SE2-201ENST00000360515 ATP10AO60312 1499 aa10.85□□□□□ -0.67
CDC42SE2-201ENST00000360515 ITSN2Q9NZM3 1697 aa10.83□□□□□ -0.68
CDC42SE2-201ENST00000360515 NPATQ14207 1427 aa10.82□□□□□ -0.68
CDC42SE2-201ENST00000360515 PLA2R1Q13018 1463 aa10.82□□□□□ -0.68
CDC42SE2-201ENST00000360515 MLH3Q9UHC1 1453 aa10.81□□□□□ -0.68
CDC42SE2-201ENST00000360515 PLCH2O75038 1416 aa10.81□□□□□ -0.68
CDC42SE2-201ENST00000360515 ABCA6Q8N139 1617 aa10.8□□□□□ -0.68
CDC42SE2-201ENST00000360515 NCOA1Q15788 1441 aa10.8□□□□□ -0.68
CDC42SE2-201ENST00000360515 PLXNC1O60486 1568 aa10.79□□□□□ -0.68
CDC42SE2-201ENST00000360515 PREX2Q70Z35 1606 aa10.79□□□□□ -0.68
CDC42SE2-201ENST00000360515 DMRT2Q9Y5R5 561 aa10.78□□□□□ -0.68
CDC42SE2-201ENST00000360515 CDC42BPBQ9Y5S2 1711 aa10.78□□□□□ -0.68
CDC42SE2-201ENST00000360515 CNTLNQ9NXG0 1405 aa10.77□□□□□ -0.69
CDC42SE2-201ENST00000360515 ZNF518AQ6AHZ1 1483 aa10.76□□□□□ -0.69
CDC42SE2-201ENST00000360515 POLR1AO95602 1720 aaPredicted RBP10.76□□□□□ -0.69
CDC42SE2-201ENST00000360515 TCOF1Q13428 1488 aaKnown RBP10.76□□□□□ -0.69
CDC42SE2-201ENST00000360515 LRRIQ1Q96JM4 1722 aa10.76□□□□□ -0.69
CDC42SE2-201ENST00000360515 KIDINS220Q9ULH0 1771 aa10.76□□□□□ -0.69
CDC42SE2-201ENST00000360515 MYO3AQ8NEV4 1616 aa10.76□□□□□ -0.69
CDC42SE2-201ENST00000360515 ABCC1P33527 1531 aa10.74□□□□□ -0.69
CDC42SE2-201ENST00000360515 EEA1Q15075 1411 aa10.74□□□□□ -0.69
CDC42SE2-201ENST00000360515 ILDR2Q71H61 639 aa10.74□□□□□ -0.69
CDC42SE2-201ENST00000360515 DEPDC5O75140 1603 aa10.73□□□□□ -0.69
CDC42SE2-201ENST00000360515 UHRF1BP1Q6BDS2 1440 aa10.73□□□□□ -0.69
CDC42SE2-201ENST00000360515 KIF14Q15058 1648 aa10.72□□□□□ -0.69
CDC42SE2-201ENST00000360515 INO80Q9ULG1 1556 aaPredicted RBP10.71□□□□□ -0.69
CDC42SE2-201ENST00000360515 ALKQ9UM73 1620 aa10.71□□□□□ -0.69
CDC42SE2-201ENST00000360515 CPS1P31327 1500 aa10.71□□□□□ -0.69
CDC42SE2-201ENST00000360515 TRAPPC8Q9Y2L5 1435 aa10.71□□□□□ -0.7
CDC42SE2-201ENST00000360515 MED1Q15648 1581 aaPredicted RBP10.71□□□□□ -0.7
CDC42SE2-201ENST00000360515 SYNMO15061 1565 aa10.7□□□□□ -0.7
CDC42SE2-201ENST00000360515 ADGBQ8N7X0 1667 aa10.69□□□□□ -0.7
CDC42SE2-201ENST00000360515 CDC42BPAQ5VT25 1732 aa10.68□□□□□ -0.7
CDC42SE2-201ENST00000360515 SUPT6HQ7KZ85 1726 aaKnown RBP10.68□□□□□ -0.7
CDC42SE2-201ENST00000360515 NEURL4Q96JN8 1562 aa10.67□□□□□ -0.7
CDC42SE2-201ENST00000360515 RAPGEF3O95398 923 aa10.67□□□□□ -0.7
CDC42SE2-201ENST00000360515 CEP170BQ9Y4F5 1589 aaPredicted RBP10.66□□□□□ -0.7
CDC42SE2-201ENST00000360515 CAMSAP1Q5T5Y3 1602 aa10.66□□□□□ -0.7
CDC42SE2-201ENST00000360515 MED14O60244 1454 aa10.65□□□□□ -0.71
CDC42SE2-201ENST00000360515 VWDEQ8N2E2 1590 aa10.64□□□□□ -0.71
CDC42SE2-201ENST00000360515 SCAPERQ9BY12 1400 aa10.64□□□□□ -0.71
CDC42SE2-201ENST00000360515 DISP3Q9P2K9 1392 aa10.64□□□□□ -0.71
CDC42SE2-201ENST00000360515 SAMD9LQ8IVG5 1584 aa10.63□□□□□ -0.71
CDC42SE2-201ENST00000360515 DNMT1P26358 1616 aaKnown RBP10.63□□□□□ -0.71
CDC42SE2-201ENST00000360515 KDM5AP29375 1690 aaKnown RBP10.62□□□□□ -0.71
CDC42SE2-201ENST00000360515 RNF17Q9BXT8 1623 aaKnown RBP10.61□□□□□ -0.71
CDC42SE2-201ENST00000360515 TROQ12816 1431 aaPredicted RBP10.61□□□□□ -0.71
CDC42SE2-201ENST00000360515 CLTCQ00610 1675 aaKnown RBP10.6□□□□□ -0.71
CDC42SE2-201ENST00000360515 ZC3H13Q5T200 1668 aaKnown RBP10.6□□□□□ -0.71
CDC42SE2-201ENST00000360515 KCNH8Q96L42 1107 aa10.59□□□□□ -0.71
CDC42SE2-201ENST00000360515 PTPRKQ15262 1439 aa10.59□□□□□ -0.71
CDC42SE2-201ENST00000360515 CAMSAP2Q08AD1 1489 aa10.59□□□□□ -0.71
CDC42SE2-201ENST00000360515 FAM9AQ8IZU1 332 aaPredicted RBP10.59□□□□□ -0.71
CDC42SE2-201ENST00000360515 PPP6R1Q9UPN7 881 aa10.59□□□□□ -0.71
CDC42SE2-201ENST00000360515 A2ML1A8K2U0 1454 aa10.58□□□□□ -0.72
CDC42SE2-201ENST00000360515 FMN1Q68DA7 1419 aa10.58□□□□□ -0.72
CDC42SE2-201ENST00000360515 KIAA1107Q9UPP5 1409 aa10.58□□□□□ -0.72
CDC42SE2-201ENST00000360515 CCDC18Q5T9S5 1454 aa10.58□□□□□ -0.72
CDC42SE2-201ENST00000360515 CDK13Q14004 1512 aaKnown RBP10.58□□□□□ -0.72
CDC42SE2-201ENST00000360515 XIRP1Q702N8 1843 aaKnown RBP10.56□□□□□ -0.72
CDC42SE2-201ENST00000360515 PKD2Q13563 968 aa10.56□□□□□ -0.72
CDC42SE2-201ENST00000360515 STRCP1A6NGW2 1772 aa10.55□□□□□ -0.72
CDC42SE2-201ENST00000360515 HSPA2P54652 639 aa10.55□□□□□ -0.72
CDC42SE2-201ENST00000360515 PLEKHH2Q8IVE3 1493 aa10.54□□□□□ -0.72
CDC42SE2-201ENST00000360515 PLEKHD1A6NEE1 506 aa10.54□□□□□ -0.72
CDC42SE2-201ENST00000360515 ATP7AQ04656 1500 aa10.53□□□□□ -0.72
CDC42SE2-201ENST00000360515 ARHGAP5Q13017 1502 aa10.53□□□□□ -0.72
CDC42SE2-201ENST00000360515 IQGAP1P46940 1657 aa10.53□□□□□ -0.72
CDC42SE2-201ENST00000360515 SUPT5HO00267 1087 aaKnown RBP10.52□□□□□ -0.72
CDC42SE2-201ENST00000360515 EIF2AK4Q9P2K8 1649 aaKnown RBP10.52□□□□□ -0.73
CDC42SE2-201ENST00000360515 RTEL1-TNFRSF6BF6WH68 1400 aa10.52□□□□□ -0.73
CDC42SE2-201ENST00000360515 KDM5DQ9BY66 1539 aa10.52□□□□□ -0.73
CDC42SE2-201ENST00000360515 EFCAB2Q5VUJ9 269 aa10.51□□□□□ -0.73
CDC42SE2-201ENST00000360515 CLIP1P30622 1438 aa10.5□□□□□ -0.73
CDC42SE2-201ENST00000360515 ARHGAP35Q9NRY4 1499 aa10.5□□□□□ -0.73
CDC42SE2-201ENST00000360515 SHANK2Q9UPX8 1470 aa10.49□□□□□ -0.73
CDC42SE2-201ENST00000360515 MAST1Q9Y2H9 1570 aa10.49□□□□□ -0.73
CDC42SE2-201ENST00000360515 PZPP20742 1482 aa10.49□□□□□ -0.73
CDC42SE2-201ENST00000360515 NLRP1Q9C000 1473 aa10.49□□□□□ -0.73
CDC42SE2-201ENST00000360515 ARID4BQ4LE39 1312 aaPredicted RBP10.49□□□□□ -0.73
CDC42SE2-201ENST00000360515 CASKIN1Q8WXD9 1431 aa10.49□□□□□ -0.73
CDC42SE2-201ENST00000360515 FYCO1Q9BQS8 1478 aa10.47□□□□□ -0.73
CDC42SE2-201ENST00000360515 NWD1Q149M9 1564 aa10.46□□□□□ -0.73
CDC42SE2-201ENST00000360515 ARHGEF5Q12774 1597 aa10.45□□□□□ -0.74
CDC42SE2-201ENST00000360515 ZMYM3Q14202 1370 aa10.45□□□□□ -0.74
CDC42SE2-201ENST00000360515 UBR1Q8IWV7 1749 aa10.45□□□□□ -0.74
CDC42SE2-201ENST00000360515 A2MP01023 1474 aa10.45□□□□□ -0.74
CDC42SE2-201ENST00000360515 SLIT1O75093 1534 aa10.45□□□□□ -0.74
CDC42SE2-201ENST00000360515 ARHGAP23Q9P227 1491 aa10.44□□□□□ -0.74
CDC42SE2-201ENST00000360515 CSRNP3Q8WYN3 585 aa10.44□□□□□ -0.74
CDC42SE2-201ENST00000360515 GPATCH8Q9UKJ3 1502 aaKnown RBP10.43□□□□□ -0.74
CDC42SE2-201ENST00000360515 TTBK1Q5TCY1 1321 aaPredicted RBP10.43□□□□□ -0.74
CDC42SE2-201ENST00000360515 SYCP2Q9BX26 1530 aa10.43□□□□□ -0.74
CDC42SE2-201ENST00000360515 LRRC7Q96NW7 1537 aa10.42□□□□□ -0.74
CDC42SE2-201ENST00000360515 MBD5Q9P267 1494 aa10.41□□□□□ -0.74
CDC42SE2-201ENST00000360515 MROH1Q8NDA8 1641 aa10.41□□□□□ -0.74
CDC42SE2-201ENST00000360515 TIAM1Q13009 1591 aa10.39□□□□□ -0.75
CDC42SE2-201ENST00000360515 UGGT1Q9NYU2 1555 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms