RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 POGKQ9P215 609 aa21.8■■□□□ 1.08
CACNA1A-201ENST00000360228 RASSF8Q8NHQ8 419 aa21.8■■□□□ 1.08
CACNA1A-201ENST00000360228 APPP05067 770 aa21.79■■□□□ 1.08
CACNA1A-201ENST00000360228 CCDC34Q96HJ3 373 aa21.79■■□□□ 1.08
CACNA1A-201ENST00000360228 TPM3P06753 285 aa21.76■■□□□ 1.07
CACNA1A-201ENST00000360228 CARD11Q9BXL7 1154 aa21.76■■□□□ 1.07
CACNA1A-201ENST00000360228 KRI1Q8N9T8 703 aaKnown RBP21.76■■□□□ 1.07
CACNA1A-201ENST00000360228 SOX12O15370 315 aa21.73■■□□□ 1.07
CACNA1A-201ENST00000360228 SLKQ9H2G2 1235 aaPredicted RBP21.73■■□□□ 1.07
CACNA1A-201ENST00000360228 PES1O00541 588 aaKnown RBP21.72■■□□□ 1.07
CACNA1A-201ENST00000360228 VPS53Q5VIR6 699 aa21.71■■□□□ 1.07
CACNA1A-201ENST00000360228 RSPH6AQ9H0K4 717 aa21.71■■□□□ 1.07
CACNA1A-201ENST00000360228 KCNH8Q96L42 1107 aa21.71■■□□□ 1.07
CACNA1A-201ENST00000360228 RRP12Q5JTH9 1297 aaKnown RBP21.71■■□□□ 1.07
CACNA1A-201ENST00000360228 TMX4Q9H1E5 349 aaPredicted RBP21.7■■□□□ 1.06
CACNA1A-201ENST00000360228 PHF14O94880 888 aa21.69■■□□□ 1.06
CACNA1A-201ENST00000360228 GOLGA6L3A6NEY3 463 aa21.69■■□□□ 1.06
CACNA1A-201ENST00000360228 CCAR2Q8N163 923 aaKnown RBP21.69■■□□□ 1.06
CACNA1A-201ENST00000360228 SCRIBQ14160 1630 aa21.68■■□□□ 1.06
CACNA1A-201ENST00000360228 CSPP1Q1MSJ5 1256 aa21.68■■□□□ 1.06
CACNA1A-201ENST00000360228 RTF1Q92541 710 aaKnown RBP21.68■■□□□ 1.06
CACNA1A-201ENST00000360228 WWC1Q8IX03 1113 aa21.67■■□□□ 1.06
CACNA1A-201ENST00000360228 GPATCH3Q96I76 525 aa21.65■■□□□ 1.06
CACNA1A-201ENST00000360228 ZNF330Q9Y3S2 320 aaPredicted RBP21.65■■□□□ 1.06
CACNA1A-201ENST00000360228 GPS2Q13227 327 aa21.65■■□□□ 1.06
CACNA1A-201ENST00000360228 TSR1Q2NL82 804 aaKnown RBP21.64■■□□□ 1.06
CACNA1A-201ENST00000360228 TPD52L1Q16890 204 aaPredicted RBP21.63■■□□□ 1.05
CACNA1A-201ENST00000360228 CHMP3Q9Y3E7 222 aa21.63■■□□□ 1.05
CACNA1A-201ENST00000360228 GORABQ5T7V8 394 aa21.63■■□□□ 1.05
CACNA1A-201ENST00000360228 TRIM6-TRIM34B2RNG4 842 aa21.62■■□□□ 1.05
CACNA1A-201ENST00000360228 ZNF771Q7L3S4 317 aaPredicted RBP21.62■■□□□ 1.05
CACNA1A-201ENST00000360228 CCDC70Q6NSX1 233 aa21.62■■□□□ 1.05
CACNA1A-201ENST00000360228 NOM1Q5C9Z4 860 aaKnown RBP21.6■■□□□ 1.05
CACNA1A-201ENST00000360228 CALD1Q05682 793 aaKnown RBP21.6■■□□□ 1.05
CACNA1A-201ENST00000360228 VSIG10Q8N0Z9 540 aa21.6■■□□□ 1.05
CACNA1A-201ENST00000360228 TAF7LQ5H9L4 462 aa21.59■■□□□ 1.05
CACNA1A-201ENST00000360228 CHMP7Q8WUX9 453 aaPredicted RBP21.59■■□□□ 1.05
CACNA1A-201ENST00000360228 MARCH6O60337 910 aa21.57■■□□□ 1.04
CACNA1A-201ENST00000360228 G3V3G9 751 aa21.57■■□□□ 1.04
CACNA1A-201ENST00000360228 DCAF8Q5TAQ9 597 aa21.57■■□□□ 1.04
CACNA1A-201ENST00000360228 ITPRIPQ8IWB1 547 aa21.57■■□□□ 1.04
CACNA1A-201ENST00000360228 NOL8Q76FK4 1167 aaKnown RBP21.56■■□□□ 1.04
CACNA1A-201ENST00000360228 TEX35Q5T0J7 233 aa21.56■■□□□ 1.04
CACNA1A-201ENST00000360228 IPO8O15397 1037 aaKnown RBP21.55■■□□□ 1.04
CACNA1A-201ENST00000360228 RBM19Q9Y4C8 960 aaKnown RBP21.54■■□□□ 1.04
CACNA1A-201ENST00000360228 MFAP1P55081 439 aaKnown RBP21.53■■□□□ 1.04
CACNA1A-201ENST00000360228 FOXD4L1Q9NU39 408 aa21.53■■□□□ 1.04
CACNA1A-201ENST00000360228 RSF1Q96T23 1441 aaPredicted RBP21.52■■□□□ 1.04
CACNA1A-201ENST00000360228 KAT6BQ8WYB5 2073 aa21.52■■□□□ 1.04
CACNA1A-201ENST00000360228 TPM2P07951 284 aa21.52■■□□□ 1.04
CACNA1A-201ENST00000360228 SRPK2P78362 688 aaKnown RBP21.52■■□□□ 1.04
CACNA1A-201ENST00000360228 STK11IPQ8N1F8 1099 aa21.52■■□□□ 1.04
CACNA1A-201ENST00000360228 SF3A1Q15459 793 aaKnown RBP21.51■■□□□ 1.03
CACNA1A-201ENST00000360228 FOXD4L5Q5VV16 416 aaPredicted RBP21.51■■□□□ 1.03
CACNA1A-201ENST00000360228 FOXD4L4Q8WXT5 416 aaPredicted RBP21.51■■□□□ 1.03
CACNA1A-201ENST00000360228 CNKSR2Q8WXI2 1034 aa21.5■■□□□ 1.03
CACNA1A-201ENST00000360228 KIF16BQ96L93 1317 aa21.5■■□□□ 1.03
CACNA1A-201ENST00000360228 ZCCHC6Q5VYS8 1495 aaKnown RBP21.5■■□□□ 1.03
CACNA1A-201ENST00000360228 GOLGA6L19H0YKK7 550 aa21.5■■□□□ 1.03
CACNA1A-201ENST00000360228 TPM1P09493 284 aa21.5■■□□□ 1.03
CACNA1A-201ENST00000360228 TCEAL9Q9UHQ7 104 aa21.48■■□□□ 1.03
CACNA1A-201ENST00000360228 HMMRO75330 724 aa21.48■■□□□ 1.03
CACNA1A-201ENST00000360228 ZNF592Q92610 1267 aa21.48■■□□□ 1.03
CACNA1A-201ENST00000360228 H3BQV1 296 aa21.46■■□□□ 1.03
CACNA1A-201ENST00000360228 IFFO2Q5TF58 517 aa21.46■■□□□ 1.03
CACNA1A-201ENST00000360228 MORC1Q86VD1 984 aa21.46■■□□□ 1.03
CACNA1A-201ENST00000360228 TMF1P82094 1093 aa21.45■■□□□ 1.02
CACNA1A-201ENST00000360228 CLIP1P30622 1438 aa21.45■■□□□ 1.02
CACNA1A-201ENST00000360228 TOMM22Q9NS69 142 aa21.45■■□□□ 1.02
CACNA1A-201ENST00000360228 RWDD1Q9H446 243 aaPredicted RBP21.44■■□□□ 1.02
CACNA1A-201ENST00000360228 PAK3O75914 559 aaPredicted RBP21.43■■□□□ 1.02
CACNA1A-201ENST00000360228 MAP7D2Q96T17 732 aa21.43■■□□□ 1.02
CACNA1A-201ENST00000360228 SAFB2Q14151 953 aaKnown RBP eCLIP21.42■■□□□ 1.02
CACNA1A-201ENST00000360228 PCMTD1Q96MG8 357 aaPredicted RBP21.42■■□□□ 1.02
CACNA1A-201ENST00000360228 PLEKHD1A6NEE1 506 aa21.42■■□□□ 1.02
CACNA1A-201ENST00000360228 ST18O60284 1047 aa21.41■■□□□ 1.02
CACNA1A-201ENST00000360228 FRAT2O75474 233 aaPredicted RBP21.41■■□□□ 1.02
CACNA1A-201ENST00000360228 KIF3AQ9Y496 699 aa21.41■■□□□ 1.02
CACNA1A-201ENST00000360228 TCERG1O14776 1098 aaKnown RBP21.4■■□□□ 1.02
CACNA1A-201ENST00000360228 RUFY1Q96T51 708 aa21.38■■□□□ 1.01
CACNA1A-201ENST00000360228 BECN2A8MW95 431 aa21.38■■□□□ 1.01
CACNA1A-201ENST00000360228 CCDC191Q8NCU4 936 aa21.38■■□□□ 1.01
CACNA1A-201ENST00000360228 SPAG9O60271 1321 aaKnown RBP21.37■■□□□ 1.01
CACNA1A-201ENST00000360228 FOXD4L6Q3SYB3 417 aaPredicted RBP21.37■■□□□ 1.01
CACNA1A-201ENST00000360228 FOXD4L3Q6VB84 417 aaPredicted RBP21.37■■□□□ 1.01
CACNA1A-201ENST00000360228 CFDP1Q9UEE9 299 aaPredicted RBP21.37■■□□□ 1.01
CACNA1A-201ENST00000360228 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.37■■□□□ 1.017e-11■■■■■ 260.8
CACNA1A-201ENST00000360228 DDX11L8A8MPP1 907 aa21.37■■□□□ 1.01
CACNA1A-201ENST00000360228 PMFBP1Q8TBY8 1022 aa21.37■■□□□ 1.01
CACNA1A-201ENST00000360228 IPO7O95373 1038 aaKnown RBP21.36■■□□□ 1.01
CACNA1A-201ENST00000360228 CSB-PGBD3P0DP91 1061 aa21.35■■□□□ 1.01
CACNA1A-201ENST00000360228 RDXP35241 583 aaKnown RBP21.35■■□□□ 1.01
CACNA1A-201ENST00000360228 AK7Q96M32 723 aa21.34■■□□□ 1.01
CACNA1A-201ENST00000360228 AKAP17AQ02040 695 aaKnown RBP21.34■■□□□ 1.01
CACNA1A-201ENST00000360228 FAM184AQ8NB25 1140 aa21.33■■□□□ 1.01
CACNA1A-201ENST00000360228 RCAN3Q9UKA8 241 aa21.33■■□□□ 1
CACNA1A-201ENST00000360228 STK31Q9BXU1 1019 aa21.33■■□□□ 1
CACNA1A-201ENST00000360228 DCAF11Q8TEB1 546 aa21.33■■□□□ 1
CACNA1A-201ENST00000360228 SLC4A10Q6U841 1118 aa21.32■■□□□ 1
CACNA1A-201ENST00000360228 KANK1Q14678 1352 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms