RNA–Protein interactions for RNA: ENST00000358694.10

CTNND1-201, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-201ENST00000358694 GOLGA6L1Q8N7Z2 621 aa11.26□□□□□ -0.61
CTNND1-201ENST00000358694 HTATSF1O43719 755 aaKnown RBP11.25□□□□□ -0.61
CTNND1-201ENST00000358694 PAK3O75914 559 aaPredicted RBP11.25□□□□□ -0.61
CTNND1-201ENST00000358694 MARCH6O60337 910 aa11.24□□□□□ -0.61
CTNND1-201ENST00000358694 SRPK2P78362 688 aaKnown RBP11.24□□□□□ -0.61
CTNND1-201ENST00000358694 TAF7LQ5H9L4 462 aa11.24□□□□□ -0.61
CTNND1-201ENST00000358694 CCDC34Q96HJ3 373 aa11.24□□□□□ -0.61
CTNND1-201ENST00000358694 CHMP3Q9Y3E7 222 aa11.24□□□□□ -0.61
CTNND1-201ENST00000358694 SUPT16HQ9Y5B9 1047 aaKnown RBP11.24□□□□□ -0.61
CTNND1-201ENST00000358694 CNKSR2Q8WXI2 1034 aa11.24□□□□□ -0.61
CTNND1-201ENST00000358694 CFAP44Q96MT7 982 aa11.23□□□□□ -0.61
CTNND1-201ENST00000358694 MIER1Q8N108 512 aa11.23□□□□□ -0.61
CTNND1-201ENST00000358694 ARID3AQ99856 593 aa11.23□□□□□ -0.61
CTNND1-201ENST00000358694 CFDP1Q9UEE9 299 aaPredicted RBP11.21□□□□□ -0.61
CTNND1-201ENST00000358694 SAFB2Q14151 953 aaKnown RBP eCLIP11.21□□□□□ -0.61
CTNND1-201ENST00000358694 FRAT2O75474 233 aaPredicted RBP11.2□□□□□ -0.62
CTNND1-201ENST00000358694 NOP58Q9Y2X3 529 aaKnown RBP11.2□□□□□ -0.62
CTNND1-201ENST00000358694 TOMM22Q9NS69 142 aa11.19□□□□□ -0.62
CTNND1-201ENST00000358694 GTF2E1P29083 439 aaPredicted RBP11.18□□□□□ -0.62
CTNND1-201ENST00000358694 TPM3P06753 285 aa11.18□□□□□ -0.62
CTNND1-201ENST00000358694 MORC1Q86VD1 984 aa11.18□□□□□ -0.62
CTNND1-201ENST00000358694 USP35Q9P2H5 1018 aa11.17□□□□□ -0.62
CTNND1-201ENST00000358694 PPP4R2Q9NY27 417 aa11.16□□□□□ -0.62
CTNND1-201ENST00000358694 PES1O00541 588 aaKnown RBP11.16□□□□□ -0.62
CTNND1-201ENST00000358694 GPATCH3Q96I76 525 aa11.16□□□□□ -0.62
CTNND1-201ENST00000358694 TCEAL9Q9UHQ7 104 aa11.15□□□□□ -0.62
CTNND1-201ENST00000358694 RSF1Q96T23 1441 aaPredicted RBP11.15□□□□□ -0.62
CTNND1-201ENST00000358694 SYAP1Q96A49 352 aaPredicted RBP11.15□□□□□ -0.62
CTNND1-201ENST00000358694 TMF1P82094 1093 aa11.15□□□□□ -0.62
CTNND1-201ENST00000358694 GBP4Q96PP9 640 aa11.15□□□□□ -0.62
CTNND1-201ENST00000358694 PATL2C9JE40 543 aaKnown RBP11.15□□□□□ -0.63
CTNND1-201ENST00000358694 IPO8O15397 1037 aaKnown RBP11.14□□□□□ -0.63
CTNND1-201ENST00000358694 CTDP1Q9Y5B0 961 aaPredicted RBP11.14□□□□□ -0.63
CTNND1-201ENST00000358694 STK26Q9P289 416 aa11.14□□□□□ -0.63
CTNND1-201ENST00000358694 MSH5O43196 834 aa11.14□□□□□ -0.63
CTNND1-201ENST00000358694 HDGFL2Q7Z4V5 671 aaPredicted RBP11.14□□□□□ -0.63
CTNND1-201ENST00000358694 B4GALNT3Q6L9W6 998 aa11.13□□□□□ -0.63
CTNND1-201ENST00000358694 PTMSP20962 102 aa11.13□□□□□ -0.63
CTNND1-201ENST00000358694 KANK1Q14678 1352 aa11.13□□□□□ -0.63
CTNND1-201ENST00000358694 TRIM6-TRIM34B2RNG4 842 aa11.12□□□□□ -0.63
CTNND1-201ENST00000358694 RAD21O60216 631 aa11.12□□□□□ -0.63
CTNND1-201ENST00000358694 SETQ01105 290 aaPredicted RBP11.12□□□□□ -0.63
CTNND1-201ENST00000358694 TPD52L1Q16890 204 aaPredicted RBP11.12□□□□□ -0.63
CTNND1-201ENST00000358694 CWC22Q9HCG8 908 aaKnown RBP11.12□□□□□ -0.63
CTNND1-201ENST00000358694 STK31Q9BXU1 1019 aa11.11□□□□□ -0.63
CTNND1-201ENST00000358694 GZF1Q9H116 711 aaPredicted RBP11.11□□□□□ -0.63
CTNND1-201ENST00000358694 ITPRIPQ8IWB1 547 aa11.11□□□□□ -0.63
CTNND1-201ENST00000358694 TRIM34Q9BYJ4 488 aa11.1□□□□□ -0.63
CTNND1-201ENST00000358694 CALD1Q05682 793 aaKnown RBP11.1□□□□□ -0.63
CTNND1-201ENST00000358694 CHMP4AQ9BY43 222 aa11.1□□□□□ -0.63
CTNND1-201ENST00000358694 TSR1Q2NL82 804 aaKnown RBP11.1□□□□□ -0.63
CTNND1-201ENST00000358694 CSPP1Q1MSJ5 1256 aa11.09□□□□□ -0.63
CTNND1-201ENST00000358694 SF3A1Q15459 793 aaKnown RBP11.09□□□□□ -0.63
CTNND1-201ENST00000358694 NOL8Q76FK4 1167 aaKnown RBP11.09□□□□□ -0.63
CTNND1-201ENST00000358694 SPAG9O60271 1321 aaKnown RBP11.09□□□□□ -0.63
CTNND1-201ENST00000358694 HDAC5Q9UQL6 1122 aa11.08□□□□□ -0.63
CTNND1-201ENST00000358694 TPM2P07951 284 aa11.08□□□□□ -0.64
CTNND1-201ENST00000358694 DCAF11Q8TEB1 546 aa11.08□□□□□ -0.64
CTNND1-201ENST00000358694 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.07□□□□□ -0.641e-6■■■■■ 38.5
CTNND1-201ENST00000358694 CALRP27797 417 aaKnown RBP11.06□□□□□ -0.64
CTNND1-201ENST00000358694 AKAP17AQ02040 695 aaKnown RBP11.06□□□□□ -0.64
CTNND1-201ENST00000358694 GGT6Q6P531 493 aa11.06□□□□□ -0.64
CTNND1-201ENST00000358694 U2AF1L5P0DN76 240 aaPredicted RBP11.06□□□□□ -0.64
CTNND1-201ENST00000358694 U2AF1Q01081 240 aaKnown RBP eCLIP11.06□□□□□ -0.642e-10■■□□□ 12.3
CTNND1-201ENST00000358694 SLC4A10Q6U841 1118 aa11.06□□□□□ -0.64
CTNND1-201ENST00000358694 CCAR2Q8N163 923 aaKnown RBP11.06□□□□□ -0.64
CTNND1-201ENST00000358694 RWDD1Q9H446 243 aaPredicted RBP11.05□□□□□ -0.64
CTNND1-201ENST00000358694 KLHL34Q8N239 644 aa11.05□□□□□ -0.64
CTNND1-201ENST00000358694 SLKQ9H2G2 1235 aaPredicted RBP11.05□□□□□ -0.64
CTNND1-201ENST00000358694 NOL10Q9BSC4 688 aaKnown RBP11.04□□□□□ -0.64
CTNND1-201ENST00000358694 HMMRO75330 724 aa11.04□□□□□ -0.64
CTNND1-201ENST00000358694 KIF3AQ9Y496 699 aa11.04□□□□□ -0.64
CTNND1-201ENST00000358694 RRP12Q5JTH9 1297 aaKnown RBP11.04□□□□□ -0.64
CTNND1-201ENST00000358694 AMOTL1Q8IY63 956 aa11.04□□□□□ -0.64
CTNND1-201ENST00000358694 KIF16BQ96L93 1317 aa11.04□□□□□ -0.64
CTNND1-201ENST00000358694 CCDC70Q6NSX1 233 aa11.03□□□□□ -0.64
CTNND1-201ENST00000358694 MFAP1P55081 439 aaKnown RBP11.03□□□□□ -0.64
CTNND1-201ENST00000358694 DCAF8L1A6NGE4 600 aa11.03□□□□□ -0.64
CTNND1-201ENST00000358694 PCMTD1Q96MG8 357 aaPredicted RBP11.03□□□□□ -0.64
CTNND1-201ENST00000358694 TPM1P09493 284 aa11.03□□□□□ -0.64
CTNND1-201ENST00000358694 FBXW7Q969H0 707 aa11.02□□□□□ -0.64
CTNND1-201ENST00000358694 ZCCHC6Q5VYS8 1495 aaKnown RBP11.02□□□□□ -0.64
CTNND1-201ENST00000358694 H3BQV1 296 aa11.02□□□□□ -0.64
CTNND1-201ENST00000358694 IFFO2Q5TF58 517 aa11.02□□□□□ -0.64
CTNND1-201ENST00000358694 CLIP1P30622 1438 aa11.02□□□□□ -0.65
CTNND1-201ENST00000358694 FOXD4L1Q9NU39 408 aa11.02□□□□□ -0.65
CTNND1-201ENST00000358694 DHX16O60231 1041 aaKnown RBP11.01□□□□□ -0.65
CTNND1-201ENST00000358694 LTV1Q96GA3 475 aaPredicted RBP11.01□□□□□ -0.65
CTNND1-201ENST00000358694 CCDC43Q96MW1 224 aaKnown RBP11.01□□□□□ -0.65
CTNND1-201ENST00000358694 SYNE3Q6ZMZ3 975 aa11.01□□□□□ -0.65
CTNND1-201ENST00000358694 FOXD4L5Q5VV16 416 aaPredicted RBP11□□□□□ -0.65
CTNND1-201ENST00000358694 FOXD4L4Q8WXT5 416 aaPredicted RBP11□□□□□ -0.65
CTNND1-201ENST00000358694 NGDNQ8NEJ9 315 aaKnown RBP11□□□□□ -0.65
CTNND1-201ENST00000358694 SCRIBQ14160 1630 aa11□□□□□ -0.65
CTNND1-201ENST00000358694 TCERG1O14776 1098 aaKnown RBP10.99□□□□□ -0.65
CTNND1-201ENST00000358694 PHF14O94880 888 aa10.99□□□□□ -0.65
CTNND1-201ENST00000358694 DEKP35659 375 aaKnown RBP10.99□□□□□ -0.65
CTNND1-201ENST00000358694 MEX3CQ5U5Q3 659 aaKnown RBP10.99□□□□□ -0.65
CTNND1-201ENST00000358694 FAM184AQ8NB25 1140 aa10.99□□□□□ -0.65
CTNND1-201ENST00000358694 GOLGA6L3A6NEY3 463 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms