RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 CFDP1Q9UEE9 299 aaPredicted RBP16.04■□□□□ 0.16
SYNCRIP-201ENST00000355238 IPO8O15397 1037 aaKnown RBP16.03■□□□□ 0.16
SYNCRIP-201ENST00000355238 ZBTB7CA1YPR0 619 aa16.02■□□□□ 0.16
SYNCRIP-201ENST00000355238 KIF27Q86VH2 1401 aa16.02■□□□□ 0.16
SYNCRIP-201ENST00000355238 PLEKHD1A6NEE1 506 aa16.02■□□□□ 0.16
SYNCRIP-201ENST00000355238 HTATSF1O43719 755 aaKnown RBP16.02■□□□□ 0.15
SYNCRIP-201ENST00000355238 HAP1P54257 671 aaPredicted RBP16.02■□□□□ 0.15
SYNCRIP-201ENST00000355238 PDE3BQ13370 1112 aa16.02■□□□□ 0.15
SYNCRIP-201ENST00000355238 U2SURPO15042 1029 aaKnown RBP16■□□□□ 0.15
SYNCRIP-201ENST00000355238 FHAD1B1AJZ9 1412 aa16■□□□□ 0.15
SYNCRIP-201ENST00000355238 PHF14O94880 888 aa15.99■□□□□ 0.15
SYNCRIP-201ENST00000355238 NAP1L2Q9ULW6 460 aaPredicted RBP15.99■□□□□ 0.15
SYNCRIP-201ENST00000355238 CSPP1Q1MSJ5 1256 aa15.97■□□□□ 0.15
SYNCRIP-201ENST00000355238 GOLGA6L1Q8N7Z2 621 aa15.97■□□□□ 0.15
SYNCRIP-201ENST00000355238 MFAP1P55081 439 aaKnown RBP15.97■□□□□ 0.15
SYNCRIP-201ENST00000355238 SKOR2Q2VWA4 1001 aaPredicted RBP15.97■□□□□ 0.15
SYNCRIP-201ENST00000355238 PDE4AP27815 886 aa15.97■□□□□ 0.15
SYNCRIP-201ENST00000355238 VPS8Q8N3P4 1428 aa15.97■□□□□ 0.15
SYNCRIP-201ENST00000355238 PPP1R15AO75807 674 aaPredicted RBP15.96■□□□□ 0.15
SYNCRIP-201ENST00000355238 TPM4P67936 248 aa15.96■□□□□ 0.15
SYNCRIP-201ENST00000355238 KIAA1211Q6ZU35 1233 aa15.95■□□□□ 0.14
SYNCRIP-201ENST00000355238 DCAF11Q8TEB1 546 aa15.94■□□□□ 0.14
SYNCRIP-201ENST00000355238 FAM161AQ3B820 660 aa15.94■□□□□ 0.14
SYNCRIP-201ENST00000355238 RB1CC1Q8TDY2 1594 aa15.93■□□□□ 0.14
SYNCRIP-201ENST00000355238 C14orf37Q86TY3 774 aa15.93■□□□□ 0.14
SYNCRIP-201ENST00000355238 MORC1Q86VD1 984 aa15.92■□□□□ 0.14
SYNCRIP-201ENST00000355238 CENPQQ7L2Z9 268 aaPredicted RBP15.92■□□□□ 0.14
SYNCRIP-201ENST00000355238 ITPRIPQ8IWB1 547 aa15.91■□□□□ 0.14
SYNCRIP-201ENST00000355238 RAB3GAP2Q9H2M9 1393 aa15.91■□□□□ 0.14
SYNCRIP-201ENST00000355238 TAOK2Q9UL54 1235 aa15.91■□□□□ 0.14
SYNCRIP-201ENST00000355238 CHMP7Q8WUX9 453 aaPredicted RBP15.9■□□□□ 0.14
SYNCRIP-201ENST00000355238 GOLGA2Q08379 1002 aa15.9■□□□□ 0.14
SYNCRIP-201ENST00000355238 PHLDB1Q86UU1 1377 aa15.89■□□□□ 0.13
SYNCRIP-201ENST00000355238 POGKQ9P215 609 aa15.87■□□□□ 0.13
SYNCRIP-201ENST00000355238 GNL2Q13823 731 aaKnown RBP15.87■□□□□ 0.13
SYNCRIP-201ENST00000355238 ARHGAP35Q9NRY4 1499 aa15.87■□□□□ 0.13
SYNCRIP-201ENST00000355238 ST18O60284 1047 aa15.87■□□□□ 0.13
SYNCRIP-201ENST00000355238 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.87■□□□□ 0.13
SYNCRIP-201ENST00000355238 ROCK2O75116 1388 aaKnown RBP15.86■□□□□ 0.13
SYNCRIP-201ENST00000355238 SETQ01105 290 aaPredicted RBP15.86■□□□□ 0.13
SYNCRIP-201ENST00000355238 DDX49Q9Y6V7 483 aaKnown RBP15.86■□□□□ 0.13
SYNCRIP-201ENST00000355238 NLRP13Q86W25 1043 aa15.86■□□□□ 0.13
SYNCRIP-201ENST00000355238 ZBED9Q6R2W3 1325 aa15.86■□□□□ 0.13
SYNCRIP-201ENST00000355238 ZNF771Q7L3S4 317 aaPredicted RBP15.85■□□□□ 0.13
SYNCRIP-201ENST00000355238 PLPPR3Q6T4P5 718 aa15.83■□□□□ 0.13
SYNCRIP-201ENST00000355238 NOC3LQ8WTT2 800 aaKnown RBP15.83■□□□□ 0.12
SYNCRIP-201ENST00000355238 CENPJQ9HC77 1338 aaPredicted RBP15.83■□□□□ 0.12
SYNCRIP-201ENST00000355238 TULP1O00294 542 aaPredicted RBP15.83■□□□□ 0.12
SYNCRIP-201ENST00000355238 CCDC34Q96HJ3 373 aa15.82■□□□□ 0.12
SYNCRIP-201ENST00000355238 SLC4A3P48751 1232 aa15.82■□□□□ 0.12
SYNCRIP-201ENST00000355238 MAP7D2Q96T17 732 aa15.82■□□□□ 0.12
SYNCRIP-201ENST00000355238 FAM43AQ8N2R8 423 aa15.82■□□□□ 0.12
SYNCRIP-201ENST00000355238 APBB1O00213 710 aa15.82■□□□□ 0.12
SYNCRIP-201ENST00000355238 RRP1P56182 461 aaKnown RBP15.81■□□□□ 0.12
SYNCRIP-201ENST00000355238 MTERF4Q7Z6M4 381 aaKnown RBP15.81■□□□□ 0.12
SYNCRIP-201ENST00000355238 FOXD4L1Q9NU39 408 aa15.81■□□□□ 0.12
SYNCRIP-201ENST00000355238 FAM13BQ9NYF5 915 aa15.81■□□□□ 0.12
SYNCRIP-201ENST00000355238 KCNH8Q96L42 1107 aa15.81■□□□□ 0.12
SYNCRIP-201ENST00000355238 SENP3Q9H4L4 574 aaPredicted RBP15.8■□□□□ 0.12
SYNCRIP-201ENST00000355238 A0A0G2JS52 829 aa15.8■□□□□ 0.12
SYNCRIP-201ENST00000355238 GPS2Q13227 327 aa15.8■□□□□ 0.12
SYNCRIP-201ENST00000355238 SMC4Q9NTJ3 1288 aa15.8■□□□□ 0.12
SYNCRIP-201ENST00000355238 HMMRO75330 724 aa15.79■□□□□ 0.12
SYNCRIP-201ENST00000355238 KIF16BQ96L93 1317 aa15.79■□□□□ 0.12
SYNCRIP-201ENST00000355238 SOGA1O94964 1423 aa15.78■□□□□ 0.12
SYNCRIP-201ENST00000355238 PKNOX2Q96KN3 472 aa15.78■□□□□ 0.12
SYNCRIP-201ENST00000355238 CHMP5Q9NZZ3 219 aa15.78■□□□□ 0.12
SYNCRIP-201ENST00000355238 KIF15Q9NS87 1388 aa15.77■□□□□ 0.12
SYNCRIP-201ENST00000355238 U2AF1L5P0DN76 240 aaPredicted RBP15.77■□□□□ 0.12
SYNCRIP-201ENST00000355238 U2AF1Q01081 240 aaKnown RBP eCLIP15.77■□□□□ 0.124e-9■□□□□ 11
SYNCRIP-201ENST00000355238 EXOC6Q8TAG9 804 aa15.77■□□□□ 0.11
SYNCRIP-201ENST00000355238 MPHOSPH9Q99550 1183 aa15.77■□□□□ 0.11
SYNCRIP-201ENST00000355238 ATP6V1DQ9Y5K8 247 aa15.77■□□□□ 0.11
SYNCRIP-201ENST00000355238 KANK4Q5T7N3 995 aaPredicted RBP15.76■□□□□ 0.11
SYNCRIP-201ENST00000355238 RTF1Q92541 710 aaKnown RBP15.76■□□□□ 0.11
SYNCRIP-201ENST00000355238 MYBBP1AQ9BQG0 1328 aaKnown RBP15.76■□□□□ 0.11
SYNCRIP-201ENST00000355238 TEX35Q5T0J7 233 aa15.76■□□□□ 0.11
SYNCRIP-201ENST00000355238 PKD2Q13563 968 aa15.76■□□□□ 0.11
SYNCRIP-201ENST00000355238 FMN1Q68DA7 1419 aa15.76■□□□□ 0.11
SYNCRIP-201ENST00000355238 TPM3P06753 285 aa15.75■□□□□ 0.11
SYNCRIP-201ENST00000355238 NFKBIBQ15653 356 aa15.74■□□□□ 0.11
SYNCRIP-201ENST00000355238 TPM2P07951 284 aa15.73■□□□□ 0.11
SYNCRIP-201ENST00000355238 GPATCH3Q96I76 525 aa15.73■□□□□ 0.11
SYNCRIP-201ENST00000355238 KANK1Q14678 1352 aa15.73■□□□□ 0.11
SYNCRIP-201ENST00000355238 CGNL1Q0VF96 1302 aa15.73■□□□□ 0.11
SYNCRIP-201ENST00000355238 KIF3AQ9Y496 699 aa15.73■□□□□ 0.11
SYNCRIP-201ENST00000355238 TRIM6-TRIM34B2RNG4 842 aa15.73■□□□□ 0.11
SYNCRIP-201ENST00000355238 PLEKHG5O94827 1062 aa15.73■□□□□ 0.11
SYNCRIP-201ENST00000355238 DHX57Q6P158 1386 aaKnown RBP15.73■□□□□ 0.11
SYNCRIP-201ENST00000355238 MRE11P49959 708 aa15.72■□□□□ 0.11
SYNCRIP-201ENST00000355238 SRPK2P78362 688 aaKnown RBP15.72■□□□□ 0.11
SYNCRIP-201ENST00000355238 CHMP4AQ9BY43 222 aa15.72■□□□□ 0.11
SYNCRIP-201ENST00000355238 CLUAP1Q96AJ1 413 aa15.72■□□□□ 0.11
SYNCRIP-201ENST00000355238 A0A0U1RQG5 324 aaPredicted RBP15.72■□□□□ 0.11
SYNCRIP-201ENST00000355238 GOLGA6L19H0YKK7 550 aa15.72■□□□□ 0.11
SYNCRIP-201ENST00000355238 PRKRIP1Q9H875 184 aaPredicted RBP15.72■□□□□ 0.11
SYNCRIP-201ENST00000355238 BAZ1BQ9UIG0 1483 aaKnown RBP15.72■□□□□ 0.11
SYNCRIP-201ENST00000355238 CRBNQ96SW2 442 aa15.71■□□□□ 0.11
SYNCRIP-201ENST00000355238 HSP90B1P14625 803 aaKnown RBP15.71■□□□□ 0.11
SYNCRIP-201ENST00000355238 L3MBTL2Q969R5 705 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms