RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 MAPKBP1O60336 1514 aa25.6■■□□□ 1.69
VPS13B-201ENST00000355155 ARHGEF5Q12774 1597 aa25.58■■□□□ 1.69
VPS13B-201ENST00000355155 ABCC5O15440 1437 aa25.58■■□□□ 1.69
VPS13B-201ENST00000355155 ADGRL2O95490 1459 aa25.58■■□□□ 1.69
VPS13B-201ENST00000355155 ACIN1Q9UKV3 1341 aaKnown RBP25.58■■□□□ 1.69
VPS13B-201ENST00000355155 CDC42BPBQ9Y5S2 1711 aa25.58■■□□□ 1.68
VPS13B-201ENST00000355155 SHANK2Q9UPX8 1470 aa25.57■■□□□ 1.68
VPS13B-201ENST00000355155 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.55■■□□□ 1.68
VPS13B-201ENST00000355155 ARID3CA6NKF2 412 aa25.54■■□□□ 1.68
VPS13B-201ENST00000355155 OSCARQ8IYS5 282 aa25.54■■□□□ 1.68
VPS13B-201ENST00000355155 ITGAEP38570 1179 aa25.52■■□□□ 1.68
VPS13B-201ENST00000355155 MYO5CQ9NQX4 1742 aa25.52■■□□□ 1.68
VPS13B-201ENST00000355155 ARAP3Q8WWN8 1544 aa25.52■■□□□ 1.68
VPS13B-201ENST00000355155 TTC37Q6PGP7 1564 aa25.51■■□□□ 1.67
VPS13B-201ENST00000355155 SAMD9LQ8IVG5 1584 aa25.47■■□□□ 1.67
VPS13B-201ENST00000355155 MAST1Q9Y2H9 1570 aa25.46■■□□□ 1.67
VPS13B-201ENST00000355155 CFDP1Q9UEE9 299 aaPredicted RBP25.45■■□□□ 1.66
VPS13B-201ENST00000355155 MBD5Q9P267 1494 aa25.43■■□□□ 1.66
VPS13B-201ENST00000355155 KDM6BO15054 1643 aa25.41■■□□□ 1.66
VPS13B-201ENST00000355155 PLEKHH2Q8IVE3 1493 aa25.41■■□□□ 1.66
VPS13B-201ENST00000355155 KIAA1107Q9UPP5 1409 aa25.4■■□□□ 1.66
VPS13B-201ENST00000355155 ZNF644Q9H582 1327 aaPredicted RBP25.39■■□□□ 1.65
VPS13B-201ENST00000355155 ABCA9Q8IUA7 1624 aa25.39■■□□□ 1.65
VPS13B-201ENST00000355155 WDR7Q9Y4E6 1490 aa25.38■■□□□ 1.65
VPS13B-201ENST00000355155 NCOA1Q15788 1441 aa25.38■■□□□ 1.65
VPS13B-201ENST00000355155 PLCH2O75038 1416 aa25.37■■□□□ 1.65
VPS13B-201ENST00000355155 RSPH4AQ5TD94 716 aa25.35■■□□□ 1.65
VPS13B-201ENST00000355155 TIMELESSQ9UNS1 1208 aa25.33■■□□□ 1.65
VPS13B-201ENST00000355155 CCDC141Q6ZP82 1450 aa25.33■■□□□ 1.65
VPS13B-201ENST00000355155 DENND4BO75064 1496 aaPredicted RBP25.31■■□□□ 1.64
VPS13B-201ENST00000355155 PLXNC1O60486 1568 aa25.3■■□□□ 1.64
VPS13B-201ENST00000355155 ARHGAP5Q13017 1502 aa25.3■■□□□ 1.64
VPS13B-201ENST00000355155 ABCC1P33527 1531 aa25.29■■□□□ 1.64
VPS13B-201ENST00000355155 C9orf84Q5VXU9 1444 aa25.29■■□□□ 1.64
VPS13B-201ENST00000355155 ANKRD30AQ9BXX3 1397 aa25.28■■□□□ 1.64
VPS13B-201ENST00000355155 KDM5DQ9BY66 1539 aa25.28■■□□□ 1.64
VPS13B-201ENST00000355155 SYCP2Q9BX26 1530 aa25.25■■□□□ 1.63
VPS13B-201ENST00000355155 RRP7BPQ9NSQ0 103 aa25.23■■□□□ 1.63
VPS13B-201ENST00000355155 ASXL2Q76L83 1435 aa25.22■■□□□ 1.63
VPS13B-201ENST00000355155 CHIC2Q9UKJ5 165 aa25.21■■□□□ 1.63
VPS13B-201ENST00000355155 ARHGEF12Q9NZN5 1544 aa25.19■■□□□ 1.62
VPS13B-201ENST00000355155 PZPP20742 1482 aa25.17■■□□□ 1.62
VPS13B-201ENST00000355155 CFAP74Q9C0B2 1584 aa25.16■■□□□ 1.62
VPS13B-201ENST00000355155 ANKRD50Q9ULJ7 1429 aa25.15■■□□□ 1.62
VPS13B-201ENST00000355155 RIMBP3CA6NJZ7 1639 aa25.15■■□□□ 1.62
VPS13B-201ENST00000355155 RIMBP3BA6NNM3 1639 aa25.15■■□□□ 1.62
VPS13B-201ENST00000355155 RIMBP3Q9UFD9 1639 aa25.15■■□□□ 1.62
VPS13B-201ENST00000355155 UNC13BO14795 1591 aa25.14■■□□□ 1.62
VPS13B-201ENST00000355155 ZNF777Q9ULD5 760 aaPredicted RBP25.14■■□□□ 1.61
VPS13B-201ENST00000355155 RTEL1-TNFRSF6BF6WH68 1400 aa25.13■■□□□ 1.61
VPS13B-201ENST00000355155 EFCAB2Q5VUJ9 269 aa25.13■■□□□ 1.61
VPS13B-201ENST00000355155 TSPY4P0CV99 314 aa25.1■■□□□ 1.61
VPS13B-201ENST00000355155 TSPY10P0CW01 314 aa25.1■■□□□ 1.61
VPS13B-201ENST00000355155 DUOX2Q9NRD8 1548 aa25.09■■□□□ 1.61
VPS13B-201ENST00000355155 HNRNPMP52272 730 aaKnown RBP eCLIP25.08■■□□□ 1.613e-7■■■■■ 30.9
VPS13B-201ENST00000355155 KIF15Q9NS87 1388 aa25.08■■□□□ 1.61
VPS13B-201ENST00000355155 MPHOSPH9Q99550 1183 aa25.08■■□□□ 1.61
VPS13B-201ENST00000355155 INO80Q9ULG1 1556 aaPredicted RBP25.08■■□□□ 1.61
VPS13B-201ENST00000355155 MAGI2Q86UL8 1455 aa25.08■■□□□ 1.61
VPS13B-201ENST00000355155 ZNF316A6NFI3 1004 aaPredicted RBP25.08■■□□□ 1.6
VPS13B-201ENST00000355155 GLI2P10070 1586 aa25.07■■□□□ 1.6
VPS13B-201ENST00000355155 ANKRD30BQ9BXX2 1392 aa25.06■■□□□ 1.6
VPS13B-201ENST00000355155 FANCAO15360 1455 aa25.05■■□□□ 1.6
VPS13B-201ENST00000355155 ERBINQ96RT1 1412 aa25.05■■□□□ 1.6
VPS13B-201ENST00000355155 ZFYVE16Q7Z3T8 1539 aa25.05■■□□□ 1.6
VPS13B-201ENST00000355155 KCNH8Q96L42 1107 aa25.04■■□□□ 1.6
VPS13B-201ENST00000355155 IQGAP3Q86VI3 1631 aa25.01■■□□□ 1.6
VPS13B-201ENST00000355155 TRAPPC8Q9Y2L5 1435 aa25.01■■□□□ 1.59
VPS13B-201ENST00000355155 SIN3AQ96ST3 1273 aa25.01■■□□□ 1.59
VPS13B-201ENST00000355155 MAP3K4Q9Y6R4 1608 aa25■■□□□ 1.59
VPS13B-201ENST00000355155 RPRD2Q5VT52 1461 aaKnown RBP25■■□□□ 1.59
VPS13B-201ENST00000355155 NPM1P06748 294 aaKnown RBP eCLIP25■■□□□ 1.59
VPS13B-201ENST00000355155 DEPDC5O75140 1603 aa24.98■■□□□ 1.59
VPS13B-201ENST00000355155 EIF2AK4Q9P2K8 1649 aaKnown RBP24.97■■□□□ 1.59
VPS13B-201ENST00000355155 KDM5CP41229 1560 aa24.96■■□□□ 1.59
VPS13B-201ENST00000355155 PPP1R15AO75807 674 aaPredicted RBP24.96■■□□□ 1.59
VPS13B-201ENST00000355155 TRIM52Q96A61 297 aa24.96■■□□□ 1.59
VPS13B-201ENST00000355155 NEO1Q92859 1461 aa24.94■■□□□ 1.58
VPS13B-201ENST00000355155 ATP7AQ04656 1500 aa24.94■■□□□ 1.58
VPS13B-201ENST00000355155 ADGRL1O94910 1474 aa24.94■■□□□ 1.58
VPS13B-201ENST00000355155 FAM135AQ9P2D6 1515 aa24.93■■□□□ 1.58
VPS13B-201ENST00000355155 TEX14Q8IWB6 1497 aa24.91■■□□□ 1.58
VPS13B-201ENST00000355155 TONSLQ96HA7 1378 aa24.91■■□□□ 1.58
VPS13B-201ENST00000355155 CD109Q6YHK3 1445 aa24.9■■□□□ 1.58
VPS13B-201ENST00000355155 BCORL1Q5H9F3 1711 aa24.9■■□□□ 1.58
VPS13B-201ENST00000355155 KIDINS220Q9ULH0 1771 aa24.88■■□□□ 1.57
VPS13B-201ENST00000355155 ZNF518AQ6AHZ1 1483 aa24.88■■□□□ 1.57
VPS13B-201ENST00000355155 VWDEQ8N2E2 1590 aa24.87■■□□□ 1.57
VPS13B-201ENST00000355155 SLC4A1APQ9BWU0 796 aaKnown RBP24.87■■□□□ 1.57
VPS13B-201ENST00000355155 SCAPERQ9BY12 1400 aa24.86■■□□□ 1.57
VPS13B-201ENST00000355155 ATP10AO60312 1499 aa24.85■■□□□ 1.57
VPS13B-201ENST00000355155 NEUROD1Q13562 356 aa24.85■■□□□ 1.57
VPS13B-201ENST00000355155 NUP155O75694 1391 aa24.85■■□□□ 1.57
VPS13B-201ENST00000355155 MLH3Q9UHC1 1453 aa24.84■■□□□ 1.57
VPS13B-201ENST00000355155 DIP2BQ9P265 1576 aa24.84■■□□□ 1.57
VPS13B-201ENST00000355155 POGZQ7Z3K3 1410 aa24.84■■□□□ 1.57
VPS13B-201ENST00000355155 SPAG9O60271 1321 aaKnown RBP24.82■■□□□ 1.56
VPS13B-201ENST00000355155 HECW2Q9P2P5 1572 aa24.8■■□□□ 1.56
VPS13B-201ENST00000355155 RNF17Q9BXT8 1623 aaKnown RBP24.8■■□□□ 1.56
VPS13B-201ENST00000355155 PRDM15P57071 1507 aaPredicted RBP24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms