RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 CFDP1Q9UEE9 299 aaPredicted RBP29.4■■■□□ 2.3
CHRNA3-202ENST00000348639 CAMSAP2Q08AD1 1489 aa29.36■■■□□ 2.29
CHRNA3-202ENST00000348639 MIER1Q8N108 512 aa29.36■■■□□ 2.29
CHRNA3-202ENST00000348639 KDM6BO15054 1643 aa29.36■■■□□ 2.29
CHRNA3-202ENST00000348639 ACIN1Q9UKV3 1341 aaKnown RBP29.35■■■□□ 2.29
CHRNA3-202ENST00000348639 ZNF777Q9ULD5 760 aaPredicted RBP29.34■■■□□ 2.29
CHRNA3-202ENST00000348639 ERCC6L2Q5T890 1561 aa29.33■■■□□ 2.29
CHRNA3-202ENST00000348639 PPP1R15AO75807 674 aaPredicted RBP29.33■■■□□ 2.29
CHRNA3-202ENST00000348639 ABCC10Q5T3U5 1492 aa29.31■■■□□ 2.28
CHRNA3-202ENST00000348639 TONSLQ96HA7 1378 aa29.29■■■□□ 2.28
CHRNA3-202ENST00000348639 TRIM52Q96A61 297 aa29.28■■■□□ 2.28
CHRNA3-202ENST00000348639 DENND4BO75064 1496 aaPredicted RBP29.27■■■□□ 2.28
CHRNA3-202ENST00000348639 CLASP1Q7Z460 1538 aa29.26■■■□□ 2.27
CHRNA3-202ENST00000348639 CDC42BPAQ5VT25 1732 aa29.25■■■□□ 2.27
CHRNA3-202ENST00000348639 MPHOSPH9Q99550 1183 aa29.22■■■□□ 2.27
CHRNA3-202ENST00000348639 ADGRL2O95490 1459 aa29.2■■■□□ 2.27
CHRNA3-202ENST00000348639 CROCC2H7BZ55 1655 aa29.2■■■□□ 2.27
CHRNA3-202ENST00000348639 NCOA1Q15788 1441 aa29.2■■■□□ 2.26
CHRNA3-202ENST00000348639 ADGBQ8N7X0 1667 aa29.2■■■□□ 2.26
CHRNA3-202ENST00000348639 CENPBP07199 599 aaPredicted RBP29.2■■■□□ 2.26
CHRNA3-202ENST00000348639 ABCC2Q92887 1545 aa29.16■■■□□ 2.26
CHRNA3-202ENST00000348639 ANKRD30AQ9BXX3 1397 aa29.12■■■□□ 2.25
CHRNA3-202ENST00000348639 SHANK2Q9UPX8 1470 aa29.11■■■□□ 2.25
CHRNA3-202ENST00000348639 KDM5BQ9UGL1 1544 aa29.11■■■□□ 2.25
CHRNA3-202ENST00000348639 PREX2Q70Z35 1606 aa29.05■■■□□ 2.24
CHRNA3-202ENST00000348639 ANKRD30BQ9BXX2 1392 aa29.05■■■□□ 2.24
CHRNA3-202ENST00000348639 ARHGEF5Q12774 1597 aa29.04■■■□□ 2.24
CHRNA3-202ENST00000348639 C9orf84Q5VXU9 1444 aa29.04■■■□□ 2.24
CHRNA3-202ENST00000348639 SCAF1Q9H7N4 1312 aaKnown RBP29.03■■■□□ 2.24
CHRNA3-202ENST00000348639 HNRNPMP52272 730 aaKnown RBP eCLIP29.03■■■□□ 2.24
CHRNA3-202ENST00000348639 FOXD1Q16676 465 aa29.03■■■□□ 2.24
CHRNA3-202ENST00000348639 SLC4A1APQ9BWU0 796 aaKnown RBP29.03■■■□□ 2.24
CHRNA3-202ENST00000348639 CDC42BPBQ9Y5S2 1711 aa29.02■■■□□ 2.24
CHRNA3-202ENST00000348639 UHRF1BP1LA0JNW5 1464 aa29.01■■■□□ 2.24
CHRNA3-202ENST00000348639 KCNH8Q96L42 1107 aa29.01■■■□□ 2.24
CHRNA3-202ENST00000348639 PZPP20742 1482 aa29.01■■■□□ 2.23
CHRNA3-202ENST00000348639 MBD5Q9P267 1494 aa29.01■■■□□ 2.23
CHRNA3-202ENST00000348639 OSCARQ8IYS5 282 aa29.01■■■□□ 2.23
CHRNA3-202ENST00000348639 TSPY4P0CV99 314 aa29■■■□□ 2.23
CHRNA3-202ENST00000348639 TSPY10P0CW01 314 aa29■■■□□ 2.23
CHRNA3-202ENST00000348639 ANKRD50Q9ULJ7 1429 aa29■■■□□ 2.23
CHRNA3-202ENST00000348639 TTC37Q6PGP7 1564 aa28.99■■■□□ 2.23
CHRNA3-202ENST00000348639 SAMD9LQ8IVG5 1584 aa28.99■■■□□ 2.23
CHRNA3-202ENST00000348639 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.98■■■□□ 2.23
CHRNA3-202ENST00000348639 YTHDC1Q96MU7 727 aaKnown RBP28.98■■■□□ 2.23
CHRNA3-202ENST00000348639 ZCCHC11Q5TAX3 1644 aaKnown RBP28.98■■■□□ 2.23
CHRNA3-202ENST00000348639 RPRD2Q5VT52 1461 aaKnown RBP28.97■■■□□ 2.23
CHRNA3-202ENST00000348639 RSPH4AQ5TD94 716 aa28.96■■■□□ 2.23
CHRNA3-202ENST00000348639 ARHGAP5Q13017 1502 aa28.94■■■□□ 2.22
CHRNA3-202ENST00000348639 CCDC141Q6ZP82 1450 aa28.94■■■□□ 2.22
CHRNA3-202ENST00000348639 L3MBTL2Q969R5 705 aa28.9■■■□□ 2.22
CHRNA3-202ENST00000348639 HIRIP3Q9BW71 556 aaPredicted RBP28.89■■■□□ 2.22
CHRNA3-202ENST00000348639 DDX10Q13206 875 aaKnown RBP28.89■■■□□ 2.21
CHRNA3-202ENST00000348639 KIAA1107Q9UPP5 1409 aa28.88■■■□□ 2.21
CHRNA3-202ENST00000348639 MYO5CQ9NQX4 1742 aa28.88■■■□□ 2.21
CHRNA3-202ENST00000348639 KIF15Q9NS87 1388 aa28.88■■■□□ 2.21
CHRNA3-202ENST00000348639 SYCP2Q9BX26 1530 aa28.85■■■□□ 2.21
CHRNA3-202ENST00000348639 TEX14Q8IWB6 1497 aa28.85■■■□□ 2.21
CHRNA3-202ENST00000348639 PLEKHH2Q8IVE3 1493 aa28.84■■■□□ 2.21
CHRNA3-202ENST00000348639 KDM5DQ9BY66 1539 aa28.84■■■□□ 2.21
CHRNA3-202ENST00000348639 MAST1Q9Y2H9 1570 aa28.81■■■□□ 2.2
CHRNA3-202ENST00000348639 PKD2Q13563 968 aa28.81■■■□□ 2.2
CHRNA3-202ENST00000348639 NUP155O75694 1391 aa28.81■■■□□ 2.2
CHRNA3-202ENST00000348639 PLCH2O75038 1416 aa28.8■■■□□ 2.2
CHRNA3-202ENST00000348639 EFCAB2Q5VUJ9 269 aa28.74■■■□□ 2.19
CHRNA3-202ENST00000348639 HSPA5P11021 654 aaKnown RBP28.72■■■□□ 2.19
CHRNA3-202ENST00000348639 EIF4G2P78344 907 aaKnown RBP eCLIP28.72■■■□□ 2.19
CHRNA3-202ENST00000348639 GTF3C3Q9Y5Q9 886 aa28.7■■■□□ 2.19
CHRNA3-202ENST00000348639 WDR7Q9Y4E6 1490 aa28.7■■■□□ 2.18
CHRNA3-202ENST00000348639 NBPF8Q3BBV2 869 aa28.7■■■□□ 2.18
CHRNA3-202ENST00000348639 PLXNC1O60486 1568 aa28.7■■■□□ 2.18
CHRNA3-202ENST00000348639 ARHGEF12Q9NZN5 1544 aa28.69■■■□□ 2.18
CHRNA3-202ENST00000348639 ARAP3Q8WWN8 1544 aa28.66■■■□□ 2.18
CHRNA3-202ENST00000348639 ABCC1P33527 1531 aa28.65■■■□□ 2.18
CHRNA3-202ENST00000348639 FAM135AQ9P2D6 1515 aa28.63■■■□□ 2.17
CHRNA3-202ENST00000348639 UNC13BO14795 1591 aa28.61■■■□□ 2.17
CHRNA3-202ENST00000348639 ANP32CO43423 234 aa28.6■■■□□ 2.17
CHRNA3-202ENST00000348639 DUOX2Q9NRD8 1548 aa28.6■■■□□ 2.17
CHRNA3-202ENST00000348639 WASHC2AQ641Q2 1341 aa28.59■■■□□ 2.17
CHRNA3-202ENST00000348639 ASXL2Q76L83 1435 aa28.59■■■□□ 2.17
CHRNA3-202ENST00000348639 TRAPPC8Q9Y2L5 1435 aa28.58■■■□□ 2.17
CHRNA3-202ENST00000348639 NPM1P06748 294 aaKnown RBP eCLIP28.57■■■□□ 2.16
CHRNA3-202ENST00000348639 CCER2I3L3R5 266 aa28.56■■■□□ 2.16
CHRNA3-202ENST00000348639 SPATA31E1Q6ZUB1 1445 aa28.56■■■□□ 2.16
CHRNA3-202ENST00000348639 ERBINQ96RT1 1412 aa28.56■■■□□ 2.16
CHRNA3-202ENST00000348639 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.55■■■□□ 2.16
CHRNA3-202ENST00000348639 ABCA9Q8IUA7 1624 aa28.53■■■□□ 2.16
CHRNA3-202ENST00000348639 UHRF1BP1Q6BDS2 1440 aa28.52■■■□□ 2.16
CHRNA3-202ENST00000348639 AFAP1Q8N556 730 aa28.52■■■□□ 2.16
CHRNA3-202ENST00000348639 FANCAO15360 1455 aa28.52■■■□□ 2.16
CHRNA3-202ENST00000348639 SPAG9O60271 1321 aaKnown RBP28.5■■■□□ 2.15
CHRNA3-202ENST00000348639 RTEL1-TNFRSF6BF6WH68 1400 aa28.5■■■□□ 2.15
CHRNA3-202ENST00000348639 IQGAP3Q86VI3 1631 aa28.5■■■□□ 2.15
CHRNA3-202ENST00000348639 MAGI2Q86UL8 1455 aa28.49■■■□□ 2.15
CHRNA3-202ENST00000348639 RIMBP3CA6NJZ7 1639 aa28.47■■■□□ 2.15
CHRNA3-202ENST00000348639 RIMBP3BA6NNM3 1639 aa28.47■■■□□ 2.15
CHRNA3-202ENST00000348639 RIMBP3Q9UFD9 1639 aa28.47■■■□□ 2.15
CHRNA3-202ENST00000348639 CCDC7Q96M83 1385 aa28.47■■■□□ 2.15
CHRNA3-202ENST00000348639 ZNF326Q5BKZ1 582 aaKnown RBP28.47■■■□□ 2.15
CHRNA3-202ENST00000348639 C11orf95C9JLR9 678 aaPredicted RBP28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms