RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 DAPK1P53355 1430 aa30.64■■■□□ 2.5
PTPN18-202ENST00000347849 PLEKHD1A6NEE1 506 aa30.64■■■□□ 2.5
PTPN18-202ENST00000347849 CFDP1Q9UEE9 299 aaPredicted RBP30.64■■■□□ 2.49
PTPN18-202ENST00000347849 SHROOM2Q13796 1616 aa30.63■■■□□ 2.49
PTPN18-202ENST00000347849 ZNF777Q9ULD5 760 aaPredicted RBP30.61■■■□□ 2.49
PTPN18-202ENST00000347849 ADCY10Q96PN6 1610 aa30.59■■■□□ 2.49
PTPN18-202ENST00000347849 GCC2Q8IWJ2 1684 aa30.57■■■□□ 2.48
PTPN18-202ENST00000347849 AKNAQ7Z591 1439 aa30.57■■■□□ 2.48
PTPN18-202ENST00000347849 DNMT1P26358 1616 aaKnown RBP30.57■■■□□ 2.48
PTPN18-202ENST00000347849 CAMSAP2Q08AD1 1489 aa30.56■■■□□ 2.48
PTPN18-202ENST00000347849 TRIM52Q96A61 297 aa30.53■■■□□ 2.48
PTPN18-202ENST00000347849 ABCC10Q5T3U5 1492 aa30.53■■■□□ 2.48
PTPN18-202ENST00000347849 DENND4BO75064 1496 aaPredicted RBP30.52■■■□□ 2.48
PTPN18-202ENST00000347849 ITSN2Q9NZM3 1697 aa30.49■■■□□ 2.47
PTPN18-202ENST00000347849 ROCK1Q13464 1354 aa30.48■■■□□ 2.47
PTPN18-202ENST00000347849 CLASP1Q7Z460 1538 aa30.48■■■□□ 2.47
PTPN18-202ENST00000347849 CDC42BPAQ5VT25 1732 aa30.44■■■□□ 2.46
PTPN18-202ENST00000347849 PPP1R15AO75807 674 aaPredicted RBP30.43■■■□□ 2.46
PTPN18-202ENST00000347849 TIMELESSQ9UNS1 1208 aa30.42■■■□□ 2.46
PTPN18-202ENST00000347849 FOXD1Q16676 465 aa30.41■■■□□ 2.46
PTPN18-202ENST00000347849 MPHOSPH9Q99550 1183 aa30.41■■■□□ 2.46
PTPN18-202ENST00000347849 SUPT16HQ9Y5B9 1047 aaKnown RBP30.4■■■□□ 2.46
PTPN18-202ENST00000347849 NCOA1Q15788 1441 aa30.37■■■□□ 2.45
PTPN18-202ENST00000347849 TONSLQ96HA7 1378 aa30.36■■■□□ 2.45
PTPN18-202ENST00000347849 ABCC2Q92887 1545 aa30.36■■■□□ 2.45
PTPN18-202ENST00000347849 HNRNPMP52272 730 aaKnown RBP eCLIP30.32■■■□□ 2.442e-8■■■■■ 35.4
PTPN18-202ENST00000347849 CROCC2H7BZ55 1655 aa30.28■■■□□ 2.44
PTPN18-202ENST00000347849 HIRIP3Q9BW71 556 aaPredicted RBP30.28■■■□□ 2.44
PTPN18-202ENST00000347849 ADGRL2O95490 1459 aa30.27■■■□□ 2.44
PTPN18-202ENST00000347849 KCNH8Q96L42 1107 aa30.27■■■□□ 2.44
PTPN18-202ENST00000347849 KDM5BQ9UGL1 1544 aa30.26■■■□□ 2.43
PTPN18-202ENST00000347849 TTC37Q6PGP7 1564 aa30.24■■■□□ 2.43
PTPN18-202ENST00000347849 ADGBQ8N7X0 1667 aa30.23■■■□□ 2.43
PTPN18-202ENST00000347849 CDC42BPBQ9Y5S2 1711 aa30.23■■■□□ 2.43
PTPN18-202ENST00000347849 ANKRD30AQ9BXX3 1397 aa30.23■■■□□ 2.43
PTPN18-202ENST00000347849 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.23■■■□□ 2.43
PTPN18-202ENST00000347849 SLC4A1APQ9BWU0 796 aaKnown RBP30.22■■■□□ 2.43
PTPN18-202ENST00000347849 MBD5Q9P267 1494 aa30.22■■■□□ 2.43
PTPN18-202ENST00000347849 C9orf84Q5VXU9 1444 aa30.22■■■□□ 2.43
PTPN18-202ENST00000347849 SAMD9LQ8IVG5 1584 aa30.21■■■□□ 2.43
PTPN18-202ENST00000347849 PREX2Q70Z35 1606 aa30.19■■■□□ 2.42
PTPN18-202ENST00000347849 PZPP20742 1482 aa30.18■■■□□ 2.42
PTPN18-202ENST00000347849 ANKRD30BQ9BXX2 1392 aa30.18■■■□□ 2.42
PTPN18-202ENST00000347849 ZCCHC11Q5TAX3 1644 aaKnown RBP30.17■■■□□ 2.42
PTPN18-202ENST00000347849 TSPY4P0CV99 314 aa30.17■■■□□ 2.42
PTPN18-202ENST00000347849 TSPY10P0CW01 314 aa30.17■■■□□ 2.42
PTPN18-202ENST00000347849 ANKRD50Q9ULJ7 1429 aa30.16■■■□□ 2.42
PTPN18-202ENST00000347849 UHRF1BP1LA0JNW5 1464 aa30.16■■■□□ 2.42
PTPN18-202ENST00000347849 SHANK2Q9UPX8 1470 aa30.15■■■□□ 2.42
PTPN18-202ENST00000347849 ARHGAP5Q13017 1502 aa30.12■■■□□ 2.41
PTPN18-202ENST00000347849 L3MBTL2Q969R5 705 aa30.11■■■□□ 2.41
PTPN18-202ENST00000347849 ARHGEF5Q12774 1597 aa30.11■■■□□ 2.41
PTPN18-202ENST00000347849 SYCP2Q9BX26 1530 aa30.08■■■□□ 2.41
PTPN18-202ENST00000347849 CCDC141Q6ZP82 1450 aa30.08■■■□□ 2.41
PTPN18-202ENST00000347849 KIF15Q9NS87 1388 aa30.08■■■□□ 2.41
PTPN18-202ENST00000347849 DDX10Q13206 875 aaKnown RBP30.05■■■□□ 2.4
PTPN18-202ENST00000347849 TSHZ2Q9NRE2 1034 aa30.04■■■□□ 2.4
PTPN18-202ENST00000347849 RPRD2Q5VT52 1461 aaKnown RBP30.04■■■□□ 2.4
PTPN18-202ENST00000347849 PKD2Q13563 968 aa30.03■■■□□ 2.4
PTPN18-202ENST00000347849 NUP155O75694 1391 aa30.01■■■□□ 2.4
PTPN18-202ENST00000347849 ARHGEF12Q9NZN5 1544 aa30.01■■■□□ 2.39
PTPN18-202ENST00000347849 MYO5CQ9NQX4 1742 aa30.01■■■□□ 2.39
PTPN18-202ENST00000347849 OSCARQ8IYS5 282 aa30■■■□□ 2.39
PTPN18-202ENST00000347849 PLCH2O75038 1416 aa29.99■■■□□ 2.39
PTPN18-202ENST00000347849 RSPH4AQ5TD94 716 aa29.98■■■□□ 2.39
PTPN18-202ENST00000347849 KIAA1107Q9UPP5 1409 aa29.97■■■□□ 2.39
PTPN18-202ENST00000347849 TEX14Q8IWB6 1497 aa29.96■■■□□ 2.39
PTPN18-202ENST00000347849 NBPF8Q3BBV2 869 aa29.94■■■□□ 2.38
PTPN18-202ENST00000347849 EFCAB2Q5VUJ9 269 aa29.91■■■□□ 2.38
PTPN18-202ENST00000347849 BCANQ96GW7 911 aa29.87■■■□□ 2.37
PTPN18-202ENST00000347849 WDR7Q9Y4E6 1490 aa29.87■■■□□ 2.37
PTPN18-202ENST00000347849 HSPA5P11021 654 aaKnown RBP29.87■■■□□ 2.37
PTPN18-202ENST00000347849 PLEKHH2Q8IVE3 1493 aa29.86■■■□□ 2.37
PTPN18-202ENST00000347849 TRAPPC8Q9Y2L5 1435 aa29.86■■■□□ 2.37
PTPN18-202ENST00000347849 MAST1Q9Y2H9 1570 aa29.86■■■□□ 2.37
PTPN18-202ENST00000347849 KDM5DQ9BY66 1539 aa29.85■■■□□ 2.37
PTPN18-202ENST00000347849 ABCC1P33527 1531 aa29.82■■■□□ 2.36
PTPN18-202ENST00000347849 FKBP8Q14318 412 aa29.8■■■□□ 2.36
PTPN18-202ENST00000347849 AFAP1Q8N556 730 aa29.8■■■□□ 2.36
PTPN18-202ENST00000347849 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.8■■■□□ 2.362e-8■■■□□ 14.6
PTPN18-202ENST00000347849 ASXL2Q76L83 1435 aa29.79■■■□□ 2.36
PTPN18-202ENST00000347849 FAM135AQ9P2D6 1515 aa29.77■■■□□ 2.36
PTPN18-202ENST00000347849 EIF4G2P78344 907 aaKnown RBP eCLIP29.76■■■□□ 2.35
PTPN18-202ENST00000347849 PLXNC1O60486 1568 aa29.75■■■□□ 2.35
PTPN18-202ENST00000347849 WASHC2AQ641Q2 1341 aa29.72■■■□□ 2.35
PTPN18-202ENST00000347849 ANP32EQ9BTT0 268 aa29.72■■■□□ 2.35
PTPN18-202ENST00000347849 ZNF326Q5BKZ1 582 aaKnown RBP29.71■■■□□ 2.35
PTPN18-202ENST00000347849 C11orf95C9JLR9 678 aaPredicted RBP29.7■■■□□ 2.34
PTPN18-202ENST00000347849 FANCAO15360 1455 aa29.69■■■□□ 2.34
PTPN18-202ENST00000347849 ARAP3Q8WWN8 1544 aa29.69■■■□□ 2.34
PTPN18-202ENST00000347849 ABCA9Q8IUA7 1624 aa29.68■■■□□ 2.34
PTPN18-202ENST00000347849 SPAG9O60271 1321 aaKnown RBP29.68■■■□□ 2.34
PTPN18-202ENST00000347849 DUOX2Q9NRD8 1548 aa29.68■■■□□ 2.34
PTPN18-202ENST00000347849 UNC13BO14795 1591 aa29.68■■■□□ 2.34
PTPN18-202ENST00000347849 NPM1P06748 294 aaKnown RBP eCLIP29.64■■■□□ 2.33
PTPN18-202ENST00000347849 PLA2R1Q13018 1463 aa29.62■■■□□ 2.33
PTPN18-202ENST00000347849 ERBINQ96RT1 1412 aa29.62■■■□□ 2.33
PTPN18-202ENST00000347849 SPATA31E1Q6ZUB1 1445 aa29.61■■■□□ 2.33
PTPN18-202ENST00000347849 ANP32CO43423 234 aa29.61■■■□□ 2.33
PTPN18-202ENST00000347849 KDM2AQ9Y2K7 1162 aa29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms