RNA–Protein interactions for RNA: ENST00000346691.9

ATRIP-202, Transcript of ATR interacting protein, humanhuman

TSL 1 (best) BASIC

Gene ATRIP, Length 2,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-202ENST00000346691 MIER1Q8N108 512 aa26.92■■□□□ 1.9
ATRIP-202ENST00000346691 CFDP1Q9UEE9 299 aaPredicted RBP26.91■■□□□ 1.9
ATRIP-202ENST00000346691 CAMSAP2Q08AD1 1489 aa26.91■■□□□ 1.9
ATRIP-202ENST00000346691 ITSN2Q9NZM3 1697 aa26.91■■□□□ 1.9
ATRIP-202ENST00000346691 ZNF777Q9ULD5 760 aaPredicted RBP26.91■■□□□ 1.9
ATRIP-202ENST00000346691 AKNAQ7Z591 1439 aa26.9■■□□□ 1.9
ATRIP-202ENST00000346691 PLEKHD1A6NEE1 506 aa26.9■■□□□ 1.9
ATRIP-202ENST00000346691 TRIM52Q96A61 297 aa26.87■■□□□ 1.89
ATRIP-202ENST00000346691 DENND4BO75064 1496 aaPredicted RBP26.87■■□□□ 1.89
ATRIP-202ENST00000346691 CDC42BPAQ5VT25 1732 aa26.85■■□□□ 1.89
ATRIP-202ENST00000346691 ABCC10Q5T3U5 1492 aa26.84■■□□□ 1.89
ATRIP-202ENST00000346691 ROCK1Q13464 1354 aa26.81■■□□□ 1.88
ATRIP-202ENST00000346691 PPP1R15AO75807 674 aaPredicted RBP26.78■■□□□ 1.88
ATRIP-202ENST00000346691 CLASP1Q7Z460 1538 aa26.78■■□□□ 1.88
ATRIP-202ENST00000346691 FOXD1Q16676 465 aa26.76■■□□□ 1.87
ATRIP-202ENST00000346691 TIMELESSQ9UNS1 1208 aa26.76■■□□□ 1.87
ATRIP-202ENST00000346691 TONSLQ96HA7 1378 aa26.76■■□□□ 1.87
ATRIP-202ENST00000346691 CROCC2H7BZ55 1655 aa26.75■■□□□ 1.87
ATRIP-202ENST00000346691 CENPBP07199 599 aaPredicted RBP26.75■■□□□ 1.87
ATRIP-202ENST00000346691 MPHOSPH9Q99550 1183 aa26.75■■□□□ 1.87
ATRIP-202ENST00000346691 ADGBQ8N7X0 1667 aa26.72■■□□□ 1.87
ATRIP-202ENST00000346691 NCOA1Q15788 1441 aa26.7■■□□□ 1.86
ATRIP-202ENST00000346691 GTF3C3Q9Y5Q9 886 aa26.69■■□□□ 1.86
ATRIP-202ENST00000346691 HIRIP3Q9BW71 556 aaPredicted RBP26.69■■□□□ 1.86
ATRIP-202ENST00000346691 ABCC2Q92887 1545 aa26.69■■□□□ 1.86
ATRIP-202ENST00000346691 KDM5BQ9UGL1 1544 aa26.68■■□□□ 1.86
ATRIP-202ENST00000346691 YTHDC1Q96MU7 727 aaKnown RBP26.67■■□□□ 1.86
ATRIP-202ENST00000346691 CDC42BPBQ9Y5S2 1711 aa26.66■■□□□ 1.86
ATRIP-202ENST00000346691 ADGRL2O95490 1459 aa26.64■■□□□ 1.86
ATRIP-202ENST00000346691 HNRNPMP52272 730 aaKnown RBP eCLIP26.64■■□□□ 1.86
ATRIP-202ENST00000346691 TTC37Q6PGP7 1564 aa26.64■■□□□ 1.85
ATRIP-202ENST00000346691 PREX2Q70Z35 1606 aa26.61■■□□□ 1.85
ATRIP-202ENST00000346691 SAMD9LQ8IVG5 1584 aa26.61■■□□□ 1.85
ATRIP-202ENST00000346691 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.59■■□□□ 1.85
ATRIP-202ENST00000346691 C9orf84Q5VXU9 1444 aa26.59■■□□□ 1.85
ATRIP-202ENST00000346691 ANKRD30AQ9BXX3 1397 aa26.59■■□□□ 1.85
ATRIP-202ENST00000346691 SLC4A1APQ9BWU0 796 aaKnown RBP26.59■■□□□ 1.85
ATRIP-202ENST00000346691 PZPP20742 1482 aa26.58■■□□□ 1.85
ATRIP-202ENST00000346691 KCNH8Q96L42 1107 aa26.57■■□□□ 1.84
ATRIP-202ENST00000346691 ZCCHC11Q5TAX3 1644 aaKnown RBP26.57■■□□□ 1.84
ATRIP-202ENST00000346691 MBD5Q9P267 1494 aa26.56■■□□□ 1.84
ATRIP-202ENST00000346691 ANKRD30BQ9BXX2 1392 aa26.55■■□□□ 1.84
ATRIP-202ENST00000346691 SHANK2Q9UPX8 1470 aa26.54■■□□□ 1.84
ATRIP-202ENST00000346691 ANKRD50Q9ULJ7 1429 aa26.53■■□□□ 1.84
ATRIP-202ENST00000346691 ARHGEF5Q12774 1597 aa26.51■■□□□ 1.83
ATRIP-202ENST00000346691 ARHGAP5Q13017 1502 aa26.51■■□□□ 1.83
ATRIP-202ENST00000346691 TSPY4P0CV99 314 aa26.5■■□□□ 1.83
ATRIP-202ENST00000346691 TSPY10P0CW01 314 aa26.5■■□□□ 1.83
ATRIP-202ENST00000346691 DDX10Q13206 875 aaKnown RBP26.49■■□□□ 1.83
ATRIP-202ENST00000346691 L3MBTL2Q969R5 705 aa26.49■■□□□ 1.83
ATRIP-202ENST00000346691 SYCP2Q9BX26 1530 aa26.49■■□□□ 1.83
ATRIP-202ENST00000346691 UHRF1BP1LA0JNW5 1464 aa26.48■■□□□ 1.83
ATRIP-202ENST00000346691 MYO5CQ9NQX4 1742 aa26.47■■□□□ 1.83
ATRIP-202ENST00000346691 CCDC141Q6ZP82 1450 aa26.46■■□□□ 1.83
ATRIP-202ENST00000346691 RPRD2Q5VT52 1461 aaKnown RBP26.46■■□□□ 1.83
ATRIP-202ENST00000346691 KIF15Q9NS87 1388 aa26.45■■□□□ 1.82
ATRIP-202ENST00000346691 PKD2Q13563 968 aa26.41■■□□□ 1.82
ATRIP-202ENST00000346691 TEX14Q8IWB6 1497 aa26.4■■□□□ 1.82
ATRIP-202ENST00000346691 NUP155O75694 1391 aa26.39■■□□□ 1.82
ATRIP-202ENST00000346691 KIAA1107Q9UPP5 1409 aa26.39■■□□□ 1.81
ATRIP-202ENST00000346691 ARHGEF12Q9NZN5 1544 aa26.38■■□□□ 1.81
ATRIP-202ENST00000346691 NBPF8Q3BBV2 869 aa26.35■■□□□ 1.81
ATRIP-202ENST00000346691 MYT1Q01538 1121 aa26.34■■□□□ 1.81
ATRIP-202ENST00000346691 PLCH2O75038 1416 aa26.34■■□□□ 1.81
ATRIP-202ENST00000346691 HSPA5P11021 654 aaKnown RBP26.32■■□□□ 1.8
ATRIP-202ENST00000346691 RSPH4AQ5TD94 716 aa26.31■■□□□ 1.8
ATRIP-202ENST00000346691 MAST1Q9Y2H9 1570 aa26.3■■□□□ 1.8
ATRIP-202ENST00000346691 KDM5DQ9BY66 1539 aa26.29■■□□□ 1.8
ATRIP-202ENST00000346691 PLEKHH2Q8IVE3 1493 aa26.26■■□□□ 1.79
ATRIP-202ENST00000346691 EFCAB2Q5VUJ9 269 aa26.25■■□□□ 1.79
ATRIP-202ENST00000346691 OSCARQ8IYS5 282 aa26.25■■□□□ 1.79
ATRIP-202ENST00000346691 ABCC1P33527 1531 aa26.24■■□□□ 1.79
ATRIP-202ENST00000346691 WDR7Q9Y4E6 1490 aa26.24■■□□□ 1.79
ATRIP-202ENST00000346691 TRAPPC8Q9Y2L5 1435 aa26.24■■□□□ 1.79
ATRIP-202ENST00000346691 FAM135AQ9P2D6 1515 aa26.22■■□□□ 1.79
ATRIP-202ENST00000346691 PLXNC1O60486 1568 aa26.21■■□□□ 1.79
ATRIP-202ENST00000346691 EIF4G2P78344 907 aaKnown RBP eCLIP26.21■■□□□ 1.79
ATRIP-202ENST00000346691 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.2■■□□□ 1.79
ATRIP-202ENST00000346691 WASHC2AQ641Q2 1341 aa26.18■■□□□ 1.78
ATRIP-202ENST00000346691 ZNF326Q5BKZ1 582 aaKnown RBP26.17■■□□□ 1.78
ATRIP-202ENST00000346691 UNC13BO14795 1591 aa26.16■■□□□ 1.78
ATRIP-202ENST00000346691 AFAP1Q8N556 730 aa26.16■■□□□ 1.78
ATRIP-202ENST00000346691 ASXL2Q76L83 1435 aa26.15■■□□□ 1.78
ATRIP-202ENST00000346691 C11orf95C9JLR9 678 aaPredicted RBP26.15■■□□□ 1.78
ATRIP-202ENST00000346691 DUOX2Q9NRD8 1548 aa26.12■■□□□ 1.77
ATRIP-202ENST00000346691 ABCA9Q8IUA7 1624 aa26.12■■□□□ 1.77
ATRIP-202ENST00000346691 ARAP3Q8WWN8 1544 aa26.1■■□□□ 1.77
ATRIP-202ENST00000346691 FANCAO15360 1455 aa26.09■■□□□ 1.77
ATRIP-202ENST00000346691 ANP32CO43423 234 aa26.08■■□□□ 1.77
ATRIP-202ENST00000346691 SPATA31E1Q6ZUB1 1445 aa26.07■■□□□ 1.76
ATRIP-202ENST00000346691 SPAG9O60271 1321 aaKnown RBP26.07■■□□□ 1.76
ATRIP-202ENST00000346691 IQGAP3Q86VI3 1631 aa26.07■■□□□ 1.76
ATRIP-202ENST00000346691 ZFYVE16Q7Z3T8 1539 aa26.06■■□□□ 1.76
ATRIP-202ENST00000346691 KDM2AQ9Y2K7 1162 aa26.06■■□□□ 1.76
ATRIP-202ENST00000346691 ERBINQ96RT1 1412 aa26.05■■□□□ 1.76
ATRIP-202ENST00000346691 PLA2R1Q13018 1463 aa26.05■■□□□ 1.76
ATRIP-202ENST00000346691 MAGI2Q86UL8 1455 aa26.02■■□□□ 1.76
ATRIP-202ENST00000346691 CCDC7Q96M83 1385 aa26.01■■□□□ 1.76
ATRIP-202ENST00000346691 DCAF11Q8TEB1 546 aa26■■□□□ 1.75
ATRIP-202ENST00000346691 ADGRL1O94910 1474 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms