RNA–Protein interactions for RNA: ENST00000345125.7

CTSB-201, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-201ENST00000345125 KIF14Q15058 1648 aa23.65■■□□□ 1.38
CTSB-201ENST00000345125 DENND4BO75064 1496 aaPredicted RBP23.64■■□□□ 1.38
CTSB-201ENST00000345125 GPATCH8Q9UKJ3 1502 aaKnown RBP23.64■■□□□ 1.38
CTSB-201ENST00000345125 ZNF644Q9H582 1327 aaPredicted RBP23.64■■□□□ 1.37
CTSB-201ENST00000345125 CAMSAP2Q08AD1 1489 aa23.62■■□□□ 1.37
CTSB-201ENST00000345125 TRIM52Q96A61 297 aa23.6■■□□□ 1.37
CTSB-201ENST00000345125 CHD1O14646 1710 aa23.59■■□□□ 1.37
CTSB-201ENST00000345125 ATP10BO94823 1461 aa23.59■■□□□ 1.37
CTSB-201ENST00000345125 CFDP1Q9UEE9 299 aaPredicted RBP23.59■■□□□ 1.37
CTSB-201ENST00000345125 KDM5BQ9UGL1 1544 aa23.57■■□□□ 1.36
CTSB-201ENST00000345125 PLEKHD1A6NEE1 506 aa23.55■■□□□ 1.36
CTSB-201ENST00000345125 MPHOSPH9Q99550 1183 aa23.55■■□□□ 1.36
CTSB-201ENST00000345125 ABCC10Q5T3U5 1492 aa23.54■■□□□ 1.36
CTSB-201ENST00000345125 PTPRGP23470 1445 aa23.54■■□□□ 1.36
CTSB-201ENST00000345125 ADGBQ8N7X0 1667 aa23.53■■□□□ 1.36
CTSB-201ENST00000345125 GTF3C3Q9Y5Q9 886 aa23.52■■□□□ 1.36
CTSB-201ENST00000345125 CROCC2H7BZ55 1655 aa23.52■■□□□ 1.36
CTSB-201ENST00000345125 SHROOM2Q13796 1616 aa23.52■■□□□ 1.36
CTSB-201ENST00000345125 ADGRL2O95490 1459 aa23.51■■□□□ 1.35
CTSB-201ENST00000345125 CDC42BPAQ5VT25 1732 aa23.51■■□□□ 1.35
CTSB-201ENST00000345125 NCOA1Q15788 1441 aa23.49■■□□□ 1.35
CTSB-201ENST00000345125 ZNF777Q9ULD5 760 aaPredicted RBP23.46■■□□□ 1.35
CTSB-201ENST00000345125 ANKRD30BQ9BXX2 1392 aa23.43■■□□□ 1.34
CTSB-201ENST00000345125 DDX10Q13206 875 aaKnown RBP23.43■■□□□ 1.34
CTSB-201ENST00000345125 SHANK2Q9UPX8 1470 aa23.42■■□□□ 1.34
CTSB-201ENST00000345125 ANKRD30AQ9BXX3 1397 aa23.41■■□□□ 1.34
CTSB-201ENST00000345125 HIRIP3Q9BW71 556 aaPredicted RBP23.4■■□□□ 1.34
CTSB-201ENST00000345125 PZPP20742 1482 aa23.39■■□□□ 1.34
CTSB-201ENST00000345125 RPRD2Q5VT52 1461 aaKnown RBP23.39■■□□□ 1.34
CTSB-201ENST00000345125 FOXD1Q16676 465 aa23.38■■□□□ 1.33
CTSB-201ENST00000345125 SLC4A1APQ9BWU0 796 aaKnown RBP23.38■■□□□ 1.33
CTSB-201ENST00000345125 ARHGEF5Q12774 1597 aa23.35■■□□□ 1.33
CTSB-201ENST00000345125 C9orf84Q5VXU9 1444 aa23.35■■□□□ 1.33
CTSB-201ENST00000345125 ERCC6L2Q5T890 1561 aa23.34■■□□□ 1.33
CTSB-201ENST00000345125 L3MBTL2Q969R5 705 aa23.33■■□□□ 1.33
CTSB-201ENST00000345125 PREX2Q70Z35 1606 aa23.33■■□□□ 1.33
CTSB-201ENST00000345125 ANKRD50Q9ULJ7 1429 aa23.33■■□□□ 1.33
CTSB-201ENST00000345125 ABCC2Q92887 1545 aa23.33■■□□□ 1.32
CTSB-201ENST00000345125 TEX14Q8IWB6 1497 aa23.32■■□□□ 1.32
CTSB-201ENST00000345125 CLASP1Q7Z460 1538 aa23.31■■□□□ 1.32
CTSB-201ENST00000345125 CDC42BPBQ9Y5S2 1711 aa23.3■■□□□ 1.32
CTSB-201ENST00000345125 MBD5Q9P267 1494 aa23.3■■□□□ 1.32
CTSB-201ENST00000345125 SAMD9LQ8IVG5 1584 aa23.29■■□□□ 1.32
CTSB-201ENST00000345125 KIAA1107Q9UPP5 1409 aa23.28■■□□□ 1.32
CTSB-201ENST00000345125 TSPY4P0CV99 314 aa23.27■■□□□ 1.32
CTSB-201ENST00000345125 TSPY10P0CW01 314 aa23.27■■□□□ 1.32
CTSB-201ENST00000345125 CCDC141Q6ZP82 1450 aa23.25■■□□□ 1.31
CTSB-201ENST00000345125 TTC37Q6PGP7 1564 aa23.24■■□□□ 1.31
CTSB-201ENST00000345125 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.24■■□□□ 1.315e-6■□□□□ 9.5
CTSB-201ENST00000345125 KDM5DQ9BY66 1539 aa23.24■■□□□ 1.31
CTSB-201ENST00000345125 HSPA5P11021 654 aaKnown RBP23.23■■□□□ 1.31
CTSB-201ENST00000345125 HNRNPMP52272 730 aaKnown RBP eCLIP23.23■■□□□ 1.31
CTSB-201ENST00000345125 KCNH8Q96L42 1107 aa23.23■■□□□ 1.31
CTSB-201ENST00000345125 EIF4G2P78344 907 aaKnown RBP eCLIP23.22■■□□□ 1.31
CTSB-201ENST00000345125 RSPH4AQ5TD94 716 aa23.22■■□□□ 1.31
CTSB-201ENST00000345125 KIF15Q9NS87 1388 aa23.21■■□□□ 1.31
CTSB-201ENST00000345125 ANP32CO43423 234 aa23.21■■□□□ 1.31
CTSB-201ENST00000345125 CCER2I3L3R5 266 aa23.2■■□□□ 1.3
CTSB-201ENST00000345125 UHRF1BP1LA0JNW5 1464 aa23.2■■□□□ 1.3
CTSB-201ENST00000345125 PKD2Q13563 968 aa23.2■■□□□ 1.3
CTSB-201ENST00000345125 ARHGAP5Q13017 1502 aa23.18■■□□□ 1.3
CTSB-201ENST00000345125 NBPF8Q3BBV2 869 aa23.18■■□□□ 1.3
CTSB-201ENST00000345125 NUP155O75694 1391 aa23.17■■□□□ 1.3
CTSB-201ENST00000345125 MYO5CQ9NQX4 1742 aa23.17■■□□□ 1.3
CTSB-201ENST00000345125 MAST1Q9Y2H9 1570 aa23.17■■□□□ 1.3
CTSB-201ENST00000345125 SYCP2Q9BX26 1530 aa23.16■■□□□ 1.3
CTSB-201ENST00000345125 WASHC2AQ641Q2 1341 aa23.15■■□□□ 1.3
CTSB-201ENST00000345125 ZCCHC11Q5TAX3 1644 aaKnown RBP23.15■■□□□ 1.3
CTSB-201ENST00000345125 PLEKHH2Q8IVE3 1493 aa23.14■■□□□ 1.29
CTSB-201ENST00000345125 SPATA31E1Q6ZUB1 1445 aa23.09■■□□□ 1.29
CTSB-201ENST00000345125 PLCH2O75038 1416 aa23.07■■□□□ 1.28
CTSB-201ENST00000345125 PLXNC1O60486 1568 aa23.07■■□□□ 1.28
CTSB-201ENST00000345125 FAM135AQ9P2D6 1515 aa23.05■■□□□ 1.28
CTSB-201ENST00000345125 CCDC7Q96M83 1385 aa23.04■■□□□ 1.28
CTSB-201ENST00000345125 UNC13BO14795 1591 aa23.04■■□□□ 1.28
CTSB-201ENST00000345125 ARHGEF12Q9NZN5 1544 aa23.04■■□□□ 1.28
CTSB-201ENST00000345125 CNTLNQ9NXG0 1405 aa23.04■■□□□ 1.28
CTSB-201ENST00000345125 UHRF1BP1Q6BDS2 1440 aa23.02■■□□□ 1.28
CTSB-201ENST00000345125 POLR1AO95602 1720 aaPredicted RBP23.02■■□□□ 1.28
CTSB-201ENST00000345125 C11orf95C9JLR9 678 aaPredicted RBP23.01■■□□□ 1.27
CTSB-201ENST00000345125 ABCC1P33527 1531 aa22.99■■□□□ 1.27
CTSB-201ENST00000345125 EFCAB2Q5VUJ9 269 aa22.99■■□□□ 1.27
CTSB-201ENST00000345125 DUOX2Q9NRD8 1548 aa22.98■■□□□ 1.27
CTSB-201ENST00000345125 ARAP3Q8WWN8 1544 aa22.97■■□□□ 1.27
CTSB-201ENST00000345125 RALGAPBQ86X10 1494 aa22.96■■□□□ 1.27
CTSB-201ENST00000345125 IQGAP3Q86VI3 1631 aa22.94■■□□□ 1.26
CTSB-201ENST00000345125 ERBINQ96RT1 1412 aa22.94■■□□□ 1.26
CTSB-201ENST00000345125 KIF7Q2M1P5 1343 aa22.94■■□□□ 1.26
CTSB-201ENST00000345125 USP47Q96K76 1375 aa22.93■■□□□ 1.26
CTSB-201ENST00000345125 KDM5CP41229 1560 aa22.93■■□□□ 1.26
CTSB-201ENST00000345125 MAGI2Q86UL8 1455 aa22.92■■□□□ 1.26
CTSB-201ENST00000345125 ZNF326Q5BKZ1 582 aaKnown RBP22.92■■□□□ 1.26
CTSB-201ENST00000345125 WDR7Q9Y4E6 1490 aa22.91■■□□□ 1.26
CTSB-201ENST00000345125 TRAPPC8Q9Y2L5 1435 aa22.9■■□□□ 1.26
CTSB-201ENST00000345125 PELP1Q8IZL8 1130 aaKnown RBP22.9■■□□□ 1.26
CTSB-201ENST00000345125 CCDC144AA2RUR9 1427 aa22.88■■□□□ 1.25
CTSB-201ENST00000345125 SUPT16HQ9Y5B9 1047 aaKnown RBP22.87■■□□□ 1.25
CTSB-201ENST00000345125 PLA2R1Q13018 1463 aa22.87■■□□□ 1.25
CTSB-201ENST00000345125 BCORL1Q5H9F3 1711 aa22.86■■□□□ 1.25
CTSB-201ENST00000345125 RTEL1-TNFRSF6BF6WH68 1400 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms