RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 ITSN2Q9NZM3 1697 aa20.07■□□□□ 0.8
CDC42-202ENST00000344548 KDM5BQ9UGL1 1544 aa20.06■□□□□ 0.8
CDC42-202ENST00000344548 KCNH8Q96L42 1107 aa20.05■□□□□ 0.8
CDC42-202ENST00000344548 DNMT1P26358 1616 aaKnown RBP20.05■□□□□ 0.8
CDC42-202ENST00000344548 KDM6BO15054 1643 aa20.04■□□□□ 0.8
CDC42-202ENST00000344548 CLSPNQ9HAW4 1339 aa20.04■□□□□ 0.8
CDC42-202ENST00000344548 TTC37Q6PGP7 1564 aa20.02■□□□□ 0.8
CDC42-202ENST00000344548 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.02■□□□□ 0.792e-6■□□□□ 10.8
CDC42-202ENST00000344548 CDC42BPBQ9Y5S2 1711 aa20■□□□□ 0.79
CDC42-202ENST00000344548 GCC2Q8IWJ2 1684 aa19.97■□□□□ 0.79
CDC42-202ENST00000344548 SIN3AQ96ST3 1273 aa19.97■□□□□ 0.79
CDC42-202ENST00000344548 AKNAQ7Z591 1439 aa19.97■□□□□ 0.79
CDC42-202ENST00000344548 HNRNPMP52272 730 aaKnown RBP eCLIP19.96■□□□□ 0.794e-7■■□□□ 11.8
CDC42-202ENST00000344548 PREX2Q70Z35 1606 aa19.95■□□□□ 0.78
CDC42-202ENST00000344548 ROCK1Q13464 1354 aa19.94■□□□□ 0.78
CDC42-202ENST00000344548 SAMD9LQ8IVG5 1584 aa19.94■□□□□ 0.78
CDC42-202ENST00000344548 MBD5Q9P267 1494 aa19.92■□□□□ 0.78
CDC42-202ENST00000344548 NCOA1Q15788 1441 aa19.91■□□□□ 0.78
CDC42-202ENST00000344548 DENND4BO75064 1496 aaPredicted RBP19.91■□□□□ 0.78
CDC42-202ENST00000344548 CROCC2H7BZ55 1655 aa19.91■□□□□ 0.78
CDC42-202ENST00000344548 ARHGAP5Q13017 1502 aa19.89■□□□□ 0.77
CDC42-202ENST00000344548 NEUROD1Q13562 356 aa19.89■□□□□ 0.77
CDC42-202ENST00000344548 TRIM52Q96A61 297 aa19.88■□□□□ 0.77
CDC42-202ENST00000344548 MYO5CQ9NQX4 1742 aa19.87■□□□□ 0.77
CDC42-202ENST00000344548 WDR7Q9Y4E6 1490 aa19.87■□□□□ 0.77
CDC42-202ENST00000344548 ADGRL2O95490 1459 aa19.86■□□□□ 0.77
CDC42-202ENST00000344548 PLCH2O75038 1416 aa19.86■□□□□ 0.77
CDC42-202ENST00000344548 C9orf84Q5VXU9 1444 aa19.85■□□□□ 0.77
CDC42-202ENST00000344548 ASXL2Q76L83 1435 aa19.85■□□□□ 0.77
CDC42-202ENST00000344548 SYCP2Q9BX26 1530 aa19.85■□□□□ 0.77
CDC42-202ENST00000344548 ARHGEF12Q9NZN5 1544 aa19.84■□□□□ 0.77
CDC42-202ENST00000344548 ADGBQ8N7X0 1667 aa19.84■□□□□ 0.77
CDC42-202ENST00000344548 ARHGEF5Q12774 1597 aa19.83■□□□□ 0.76
CDC42-202ENST00000344548 FOXD1Q16676 465 aa19.82■□□□□ 0.76
CDC42-202ENST00000344548 ANKRD30AQ9BXX3 1397 aa19.82■□□□□ 0.76
CDC42-202ENST00000344548 TSPY4P0CV99 314 aa19.81■□□□□ 0.76
CDC42-202ENST00000344548 TSPY10P0CW01 314 aa19.81■□□□□ 0.76
CDC42-202ENST00000344548 MPHOSPH9Q99550 1183 aa19.81■□□□□ 0.76
CDC42-202ENST00000344548 SHANK2Q9UPX8 1470 aa19.81■□□□□ 0.76
CDC42-202ENST00000344548 CCDC141Q6ZP82 1450 aa19.8■□□□□ 0.76
CDC42-202ENST00000344548 CYB5RLQ6IPT4 315 aa19.78■□□□□ 0.76
CDC42-202ENST00000344548 EFCAB2Q5VUJ9 269 aa19.78■□□□□ 0.76
CDC42-202ENST00000344548 ANKRD50Q9ULJ7 1429 aa19.77■□□□□ 0.75
CDC42-202ENST00000344548 ZNF316A6NFI3 1004 aaPredicted RBP19.76■□□□□ 0.75
CDC42-202ENST00000344548 NPM1P06748 294 aaKnown RBP eCLIP19.76■□□□□ 0.75
CDC42-202ENST00000344548 KIAA1107Q9UPP5 1409 aa19.76■□□□□ 0.75
CDC42-202ENST00000344548 KIF15Q9NS87 1388 aa19.75■□□□□ 0.75
CDC42-202ENST00000344548 ABCA9Q8IUA7 1624 aa19.74■□□□□ 0.75
CDC42-202ENST00000344548 TRAPPC8Q9Y2L5 1435 aa19.74■□□□□ 0.75
CDC42-202ENST00000344548 RIMBP3CA6NJZ7 1639 aa19.74■□□□□ 0.75
CDC42-202ENST00000344548 RIMBP3BA6NNM3 1639 aa19.74■□□□□ 0.75
CDC42-202ENST00000344548 RIMBP3Q9UFD9 1639 aa19.74■□□□□ 0.75
CDC42-202ENST00000344548 RSPH4AQ5TD94 716 aa19.73■□□□□ 0.75
CDC42-202ENST00000344548 PZPP20742 1482 aa19.73■□□□□ 0.75
CDC42-202ENST00000344548 ABCC1P33527 1531 aa19.73■□□□□ 0.75
CDC42-202ENST00000344548 SLC4A1APQ9BWU0 796 aaKnown RBP19.71■□□□□ 0.75
CDC42-202ENST00000344548 AFAP1Q8N556 730 aa19.71■□□□□ 0.75
CDC42-202ENST00000344548 PLEKHH2Q8IVE3 1493 aa19.7■□□□□ 0.74
CDC42-202ENST00000344548 FANCAO15360 1455 aa19.69■□□□□ 0.74
CDC42-202ENST00000344548 ARAP3Q8WWN8 1544 aa19.68■□□□□ 0.74
CDC42-202ENST00000344548 MAST1Q9Y2H9 1570 aa19.68■□□□□ 0.74
CDC42-202ENST00000344548 PPP1R15AO75807 674 aaPredicted RBP19.67■□□□□ 0.74
CDC42-202ENST00000344548 ANKRD30BQ9BXX2 1392 aa19.66■□□□□ 0.74
CDC42-202ENST00000344548 TIMELESSQ9UNS1 1208 aa19.64■□□□□ 0.74
CDC42-202ENST00000344548 NUP155O75694 1391 aa19.64■□□□□ 0.73
CDC42-202ENST00000344548 TONSLQ96HA7 1378 aa19.63■□□□□ 0.73
CDC42-202ENST00000344548 DIEXFQ68CQ4 756 aaKnown RBP19.63■□□□□ 0.73
CDC42-202ENST00000344548 PKD2Q13563 968 aa19.62■□□□□ 0.73
CDC42-202ENST00000344548 SCAPERQ9BY12 1400 aa19.61■□□□□ 0.73
CDC42-202ENST00000344548 CD109Q6YHK3 1445 aa19.61■□□□□ 0.73
CDC42-202ENST00000344548 ADGRL1O94910 1474 aa19.61■□□□□ 0.73
CDC42-202ENST00000344548 PLXNC1O60486 1568 aa19.6■□□□□ 0.73
CDC42-202ENST00000344548 SPAG9O60271 1321 aaKnown RBP19.59■□□□□ 0.73
CDC42-202ENST00000344548 ACIN1Q9UKV3 1341 aaKnown RBP19.59■□□□□ 0.73
CDC42-202ENST00000344548 ZFYVE16Q7Z3T8 1539 aa19.57■□□□□ 0.72
CDC42-202ENST00000344548 KDM5DQ9BY66 1539 aa19.56■□□□□ 0.72
CDC42-202ENST00000344548 L3MBTL2Q969R5 705 aa19.55■□□□□ 0.72
CDC42-202ENST00000344548 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.55■□□□□ 0.729e-6■■■□□ 18.9
CDC42-202ENST00000344548 RPRD2Q5VT52 1461 aaKnown RBP19.55■□□□□ 0.72
CDC42-202ENST00000344548 DUOX2Q9NRD8 1548 aa19.54■□□□□ 0.72
CDC42-202ENST00000344548 RTEL1-TNFRSF6BF6WH68 1400 aa19.53■□□□□ 0.72
CDC42-202ENST00000344548 FAM135AQ9P2D6 1515 aa19.53■□□□□ 0.72
CDC42-202ENST00000344548 HIRIP3Q9BW71 556 aaPredicted RBP19.51■□□□□ 0.71
CDC42-202ENST00000344548 INO80Q9ULG1 1556 aaPredicted RBP19.51■□□□□ 0.71
CDC42-202ENST00000344548 UNC13BO14795 1591 aa19.5■□□□□ 0.71
CDC42-202ENST00000344548 ATP7AQ04656 1500 aa19.5■□□□□ 0.71
CDC42-202ENST00000344548 ERBINQ96RT1 1412 aa19.5■□□□□ 0.71
CDC42-202ENST00000344548 TEX14Q8IWB6 1497 aa19.48■□□□□ 0.71
CDC42-202ENST00000344548 MYT1LQ9UL68 1186 aa19.48■□□□□ 0.71
CDC42-202ENST00000344548 KIDINS220Q9ULH0 1771 aa19.46■□□□□ 0.71
CDC42-202ENST00000344548 RAPGEF3O95398 923 aa19.46■□□□□ 0.71
CDC42-202ENST00000344548 MAP3K4Q9Y6R4 1608 aa19.45■□□□□ 0.7
CDC42-202ENST00000344548 FAM69CQ0P6D2 419 aa19.45■□□□□ 0.7
CDC42-202ENST00000344548 MAGI2Q86UL8 1455 aa19.45■□□□□ 0.7
CDC42-202ENST00000344548 NBPF8Q3BBV2 869 aa19.45■□□□□ 0.7
CDC42-202ENST00000344548 POGZQ7Z3K3 1410 aa19.44■□□□□ 0.7
CDC42-202ENST00000344548 ZNF518AQ6AHZ1 1483 aa19.44■□□□□ 0.7
CDC42-202ENST00000344548 IQGAP3Q86VI3 1631 aa19.43■□□□□ 0.7
CDC42-202ENST00000344548 PLA2R1Q13018 1463 aa19.43■□□□□ 0.7
CDC42-202ENST00000344548 DIP2BQ9P265 1576 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms