RNA–Protein interactions for RNA: ENST00000344157.8

YTHDC1-201, Transcript of YTH domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YTHDC1, Length 6,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YTHDC1-201ENST00000344157 PRM3Q9NNZ6 103 aa15.42■□□□□ 0.06
YTHDC1-201ENST00000344157 LMOD2Q6P5Q4 547 aa15.41■□□□□ 0.06
YTHDC1-201ENST00000344157 TPM3P06753 285 aa15.4■□□□□ 0.06
YTHDC1-201ENST00000344157 ZNF771Q7L3S4 317 aaPredicted RBP15.4■□□□□ 0.06
YTHDC1-201ENST00000344157 MFAP1P55081 439 aaKnown RBP15.38■□□□□ 0.05
YTHDC1-201ENST00000344157 CCDC34Q96HJ3 373 aa15.38■□□□□ 0.05
YTHDC1-201ENST00000344157 SIN3AQ96ST3 1273 aa15.38■□□□□ 0.05
YTHDC1-201ENST00000344157 RWDD1Q9H446 243 aaPredicted RBP15.38■□□□□ 0.05
YTHDC1-201ENST00000344157 HSP90B1P14625 803 aaKnown RBP15.37■□□□□ 0.05
YTHDC1-201ENST00000344157 PATL2C9JE40 543 aaKnown RBP15.37■□□□□ 0.05
YTHDC1-201ENST00000344157 POGKQ9P215 609 aa15.37■□□□□ 0.05
YTHDC1-201ENST00000344157 CCER2I3L3R5 266 aa15.36■□□□□ 0.05
YTHDC1-201ENST00000344157 CLIP1P30622 1438 aa15.36■□□□□ 0.05
YTHDC1-201ENST00000344157 IPO8O15397 1037 aaKnown RBP15.35■□□□□ 0.05
YTHDC1-201ENST00000344157 CREBRFQ8IUR6 639 aa15.35■□□□□ 0.05
YTHDC1-201ENST00000344157 FOXD4L1Q9NU39 408 aa15.35■□□□□ 0.05
YTHDC1-201ENST00000344157 CSPP1Q1MSJ5 1256 aa15.35■□□□□ 0.05
YTHDC1-201ENST00000344157 CCAR2Q8N163 923 aaKnown RBP15.34■□□□□ 0.05
YTHDC1-201ENST00000344157 RCAN3Q9UKA8 241 aa15.33■□□□□ 0.05
YTHDC1-201ENST00000344157 PHF14O94880 888 aa15.33■□□□□ 0.05
YTHDC1-201ENST00000344157 CEP89Q96ST8 783 aa15.33■□□□□ 0.04
YTHDC1-201ENST00000344157 GPS2Q13227 327 aa15.32■□□□□ 0.04
YTHDC1-201ENST00000344157 TIMELESSQ9UNS1 1208 aa15.31■□□□□ 0.04
YTHDC1-201ENST00000344157 ITPRIPQ8IWB1 547 aa15.31■□□□□ 0.04
YTHDC1-201ENST00000344157 NOL8Q76FK4 1167 aaKnown RBP15.3■□□□□ 0.04
YTHDC1-201ENST00000344157 RASSF8Q8NHQ8 419 aa15.3■□□□□ 0.04
YTHDC1-201ENST00000344157 GSE1Q14687 1217 aa15.3■□□□□ 0.04
YTHDC1-201ENST00000344157 TMF1P82094 1093 aa15.29■□□□□ 0.04
YTHDC1-201ENST00000344157 FAM13BQ9NYF5 915 aa15.29■□□□□ 0.04
YTHDC1-201ENST00000344157 DDX11L8A8MPP1 907 aa15.29■□□□□ 0.04
YTHDC1-201ENST00000344157 KCNH8Q96L42 1107 aa15.29■□□□□ 0.04
YTHDC1-201ENST00000344157 FOXD4L5Q5VV16 416 aaPredicted RBP15.27■□□□□ 0.04
YTHDC1-201ENST00000344157 MORC1Q86VD1 984 aa15.27■□□□□ 0.04
YTHDC1-201ENST00000344157 FOXD4L4Q8WXT5 416 aaPredicted RBP15.27■□□□□ 0.04
YTHDC1-201ENST00000344157 PMFBP1Q8TBY8 1022 aa15.27■□□□□ 0.03
YTHDC1-201ENST00000344157 DDX49Q9Y6V7 483 aaKnown RBP15.26■□□□□ 0.03
YTHDC1-201ENST00000344157 SOX12O15370 315 aa15.25■□□□□ 0.03
YTHDC1-201ENST00000344157 RTF1Q92541 710 aaKnown RBP15.25■□□□□ 0.03
YTHDC1-201ENST00000344157 ABCC9O60706 1549 aa15.25■□□□□ 0.03
YTHDC1-201ENST00000344157 TRIM6-TRIM34B2RNG4 842 aa15.25■□□□□ 0.03
YTHDC1-201ENST00000344157 ZNF592Q92610 1267 aa15.25■□□□□ 0.03
YTHDC1-201ENST00000344157 PLEKHD1A6NEE1 506 aa15.24■□□□□ 0.03
YTHDC1-201ENST00000344157 PES1O00541 588 aaKnown RBP15.24■□□□□ 0.03
YTHDC1-201ENST00000344157 SF3A1Q15459 793 aaKnown RBP15.24■□□□□ 0.03
YTHDC1-201ENST00000344157 RSF1Q96T23 1441 aaPredicted RBP15.24■□□□□ 0.03
YTHDC1-201ENST00000344157 TEX35Q5T0J7 233 aa15.24■□□□□ 0.03
YTHDC1-201ENST00000344157 GOLGA6L19H0YKK7 550 aa15.23■□□□□ 0.03
YTHDC1-201ENST00000344157 ST18O60284 1047 aa15.23■□□□□ 0.03
YTHDC1-201ENST00000344157 CFDP1Q9UEE9 299 aaPredicted RBP15.23■□□□□ 0.03
YTHDC1-201ENST00000344157 TSR1Q2NL82 804 aaKnown RBP15.22■□□□□ 0.03
YTHDC1-201ENST00000344157 CCDC70Q6NSX1 233 aa15.22■□□□□ 0.03
YTHDC1-201ENST00000344157 BECN2A8MW95 431 aa15.22■□□□□ 0.03
YTHDC1-201ENST00000344157 RRP12Q5JTH9 1297 aaKnown RBP15.22■□□□□ 0.03
YTHDC1-201ENST00000344157 KIF16BQ96L93 1317 aa15.21■□□□□ 0.02
YTHDC1-201ENST00000344157 SLC4A3P48751 1232 aa15.2■□□□□ 0.02
YTHDC1-201ENST00000344157 SKOR2Q2VWA4 1001 aaPredicted RBP15.2■□□□□ 0.02
YTHDC1-201ENST00000344157 ANO8Q9HCE9 1232 aaPredicted RBP15.2■□□□□ 0.02
YTHDC1-201ENST00000344157 DCAF11Q8TEB1 546 aa15.2■□□□□ 0.02
YTHDC1-201ENST00000344157 TPD52L1Q16890 204 aaPredicted RBP15.19■□□□□ 0.02
YTHDC1-201ENST00000344157 GORABQ5T7V8 394 aa15.19■□□□□ 0.02
YTHDC1-201ENST00000344157 KIF3AQ9Y496 699 aa15.19■□□□□ 0.02
YTHDC1-201ENST00000344157 APPP05067 770 aa15.18■□□□□ 0.02
YTHDC1-201ENST00000344157 GPATCH3Q96I76 525 aa15.18■□□□□ 0.02
YTHDC1-201ENST00000344157 SRPK2P78362 688 aaKnown RBP15.18■□□□□ 0.02
YTHDC1-201ENST00000344157 TPM1P09493 284 aa15.17■□□□□ 0.02
YTHDC1-201ENST00000344157 KTN1Q86UP2 1357 aaKnown RBP15.17■□□□□ 0.02
YTHDC1-201ENST00000344157 ZCCHC6Q5VYS8 1495 aaKnown RBP15.17■□□□□ 0.02
YTHDC1-201ENST00000344157 HMMRO75330 724 aa15.17■□□□□ 0.02
YTHDC1-201ENST00000344157 U2AF1L5P0DN76 240 aaPredicted RBP15.17■□□□□ 0.02
YTHDC1-201ENST00000344157 U2AF1Q01081 240 aaKnown RBP eCLIP15.17■□□□□ 0.024e-8■■□□□ 12.3
YTHDC1-201ENST00000344157 CHMP7Q8WUX9 453 aaPredicted RBP15.17■□□□□ 0.02
YTHDC1-201ENST00000344157 CLUAP1Q96AJ1 413 aa15.17■□□□□ 0.02
YTHDC1-201ENST00000344157 TRHP20396 242 aaPredicted RBP15.17■□□□□ 0.02
YTHDC1-201ENST00000344157 TAF7LQ5H9L4 462 aa15.16■□□□□ 0.02
YTHDC1-201ENST00000344157 HSPA5P11021 654 aaKnown RBP15.16■□□□□ 0.02
YTHDC1-201ENST00000344157 FOXD4L6Q3SYB3 417 aaPredicted RBP15.16■□□□□ 0.02
YTHDC1-201ENST00000344157 FOXD4L3Q6VB84 417 aaPredicted RBP15.16■□□□□ 0.02
YTHDC1-201ENST00000344157 NOM1Q5C9Z4 860 aaKnown RBP15.16■□□□□ 0.02
YTHDC1-201ENST00000344157 FBXO3Q9UK99 471 aa15.16■□□□□ 0.02
YTHDC1-201ENST00000344157 SMC4Q9NTJ3 1288 aa15.16■□□□□ 0.02
YTHDC1-201ENST00000344157 FAM43AQ8N2R8 423 aa15.15■□□□□ 0.02
YTHDC1-201ENST00000344157 CEP162Q5TB80 1403 aa15.15■□□□□ 0.02
YTHDC1-201ENST00000344157 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.15■□□□□ 0.02
YTHDC1-201ENST00000344157 ATP6V1DQ9Y5K8 247 aa15.14■□□□□ 0.01
YTHDC1-201ENST00000344157 HOMER1Q86YM7 354 aa15.14■□□□□ 0.01
YTHDC1-201ENST00000344157 ZNF330Q9Y3S2 320 aaPredicted RBP15.14■□□□□ 0.01
YTHDC1-201ENST00000344157 H3BQV1 296 aa15.13■□□□□ 0.01
YTHDC1-201ENST00000344157 IFFO2Q5TF58 517 aa15.13■□□□□ 0.01
YTHDC1-201ENST00000344157 WWC1Q8IX03 1113 aa15.13■□□□□ 0.01
YTHDC1-201ENST00000344157 MARCH6O60337 910 aa15.13■□□□□ 0.01
YTHDC1-201ENST00000344157 STK31Q9BXU1 1019 aa15.13■□□□□ 0.01
YTHDC1-201ENST00000344157 TOMM22Q9NS69 142 aa15.13■□□□□ 0.01
YTHDC1-201ENST00000344157 IPO7O95373 1038 aaKnown RBP15.12■□□□□ 0.01
YTHDC1-201ENST00000344157 PDE4AP27815 886 aa15.12■□□□□ 0.01
YTHDC1-201ENST00000344157 CHMP3Q9Y3E7 222 aa15.11■□□□□ 0.01
YTHDC1-201ENST00000344157 SAFB2Q14151 953 aaKnown RBP eCLIP15.11■□□□□ 0.01
YTHDC1-201ENST00000344157 PKNOX2Q96KN3 472 aa15.1■□□□□ 0.01
YTHDC1-201ENST00000344157 TPM2P07951 284 aa15.1■□□□□ 0.01
YTHDC1-201ENST00000344157 FAM161AQ3B820 660 aa15.09■□□□□ 0.01
YTHDC1-201ENST00000344157 FAM184AQ8NB25 1140 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms