RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 PLCH2O75038 1416 aa21.57■■□□□ 1.04
HERPUD1-202ENST00000344114 ARHGEF12Q9NZN5 1544 aa21.55■■□□□ 1.04
HERPUD1-202ENST00000344114 SCAPERQ9BY12 1400 aa21.55■■□□□ 1.04
HERPUD1-202ENST00000344114 MYO5CQ9NQX4 1742 aa21.54■■□□□ 1.04
HERPUD1-202ENST00000344114 PREX1Q8TCU6 1659 aa21.52■■□□□ 1.04
HERPUD1-202ENST00000344114 ATP10AO60312 1499 aa21.51■■□□□ 1.03
HERPUD1-202ENST00000344114 PLPPR3Q6T4P5 718 aa21.51■■□□□ 1.03
HERPUD1-202ENST00000344114 C9orf84Q5VXU9 1444 aa21.5■■□□□ 1.03
HERPUD1-202ENST00000344114 MLECQ14165 292 aa21.49■■□□□ 1.03
HERPUD1-202ENST00000344114 CERKQ8TCT0 537 aa21.48■■□□□ 1.03
HERPUD1-202ENST00000344114 KIF14Q15058 1648 aa21.46■■□□□ 1.03
HERPUD1-202ENST00000344114 KDM5CP41229 1560 aa21.45■■□□□ 1.02
HERPUD1-202ENST00000344114 FMN1Q68DA7 1419 aa21.45■■□□□ 1.02
HERPUD1-202ENST00000344114 EFCAB2Q5VUJ9 269 aa21.44■■□□□ 1.02
HERPUD1-202ENST00000344114 ZNF518AQ6AHZ1 1483 aa21.43■■□□□ 1.02
HERPUD1-202ENST00000344114 STRCQ7RTU9 1775 aa21.43■■□□□ 1.02
HERPUD1-202ENST00000344114 ARHGAP35Q9NRY4 1499 aa21.41■■□□□ 1.02
HERPUD1-202ENST00000344114 LRRIQ1Q96JM4 1722 aa21.4■■□□□ 1.02
HERPUD1-202ENST00000344114 REREQ9P2R6 1566 aa21.4■■□□□ 1.02
HERPUD1-202ENST00000344114 DIP2CQ9Y2E4 1556 aa21.39■■□□□ 1.02
HERPUD1-202ENST00000344114 SETD1BQ9UPS6 1966 aaKnown RBP21.39■■□□□ 1.01
HERPUD1-202ENST00000344114 ARHGAP5Q13017 1502 aa21.38■■□□□ 1.01
HERPUD1-202ENST00000344114 TROQ12816 1431 aaPredicted RBP21.38■■□□□ 1.01
HERPUD1-202ENST00000344114 EHMT2Q96KQ7 1210 aa21.37■■□□□ 1.01
HERPUD1-202ENST00000344114 CDK11AQ9UQ88 783 aaPredicted RBP21.37■■□□□ 1.01
HERPUD1-202ENST00000344114 CDC42BPBQ9Y5S2 1711 aa21.37■■□□□ 1.01
HERPUD1-202ENST00000344114 CEBPAP49715 358 aaPredicted RBP21.36■■□□□ 1.01
HERPUD1-202ENST00000344114 UHRF1BP1Q6BDS2 1440 aa21.35■■□□□ 1.01
HERPUD1-202ENST00000344114 ABCA6Q8N139 1617 aa21.35■■□□□ 1.01
HERPUD1-202ENST00000344114 C3P01024 1663 aa21.34■■□□□ 1.01
HERPUD1-202ENST00000344114 AFAP1Q8N556 730 aa21.34■■□□□ 1.01
HERPUD1-202ENST00000344114 ATP1B4Q9UN42 357 aaPredicted RBP21.34■■□□□ 1.01
HERPUD1-202ENST00000344114 CLIP1P30622 1438 aa21.33■■□□□ 1.01
HERPUD1-202ENST00000344114 CEP162Q5TB80 1403 aa21.33■■□□□ 1.01
HERPUD1-202ENST00000344114 MLH3Q9UHC1 1453 aa21.32■■□□□ 1
HERPUD1-202ENST00000344114 DMRT2Q9Y5R5 561 aa21.32■■□□□ 1
HERPUD1-202ENST00000344114 PREX2Q70Z35 1606 aa21.32■■□□□ 1
HERPUD1-202ENST00000344114 AGLP35573 1532 aa21.3■■□□□ 1
HERPUD1-202ENST00000344114 UBTFP17480 764 aaKnown RBP21.3■■□□□ 1
HERPUD1-202ENST00000344114 ITSN2Q9NZM3 1697 aa21.3■■□□□ 1
HERPUD1-202ENST00000344114 ABCC1P33527 1531 aa21.29■■□□□ 1
HERPUD1-202ENST00000344114 PTPRTO14522 1441 aa21.27■■□□□ 1
HERPUD1-202ENST00000344114 KIDINS220Q9ULH0 1771 aa21.25■□□□□ 0.99
HERPUD1-202ENST00000344114 TRAPPC8Q9Y2L5 1435 aa21.25■□□□□ 0.99
HERPUD1-202ENST00000344114 MYT1LQ9UL68 1186 aa21.23■□□□□ 0.99
HERPUD1-202ENST00000344114 CDC42BPAQ5VT25 1732 aa21.23■□□□□ 0.99
HERPUD1-202ENST00000344114 CCDC18Q5T9S5 1454 aa21.21■□□□□ 0.99
HERPUD1-202ENST00000344114 LTBP4Q8N2S1 1624 aa21.21■□□□□ 0.99
HERPUD1-202ENST00000344114 CNTLNQ9NXG0 1405 aa21.19■□□□□ 0.98
HERPUD1-202ENST00000344114 MROH2AA6NES4 1674 aa21.19■□□□□ 0.98
HERPUD1-202ENST00000344114 DISP3Q9P2K9 1392 aa21.19■□□□□ 0.98
HERPUD1-202ENST00000344114 CASKIN1Q8WXD9 1431 aa21.18■□□□□ 0.98
HERPUD1-202ENST00000344114 IQSEC2Q5JU85 1478 aa21.18■□□□□ 0.98
HERPUD1-202ENST00000344114 NCOA1Q15788 1441 aa21.17■□□□□ 0.98
HERPUD1-202ENST00000344114 ILDR2Q71H61 639 aa21.17■□□□□ 0.98
HERPUD1-202ENST00000344114 SAMD9LQ8IVG5 1584 aa21.16■□□□□ 0.98
HERPUD1-202ENST00000344114 ESF1Q9H501 851 aaKnown RBP21.16■□□□□ 0.98
HERPUD1-202ENST00000344114 SPATA31D1Q6ZQQ2 1576 aa21.13■□□□□ 0.97
HERPUD1-202ENST00000344114 NPATQ14207 1427 aa21.12■□□□□ 0.97
HERPUD1-202ENST00000344114 CAMSAP1Q5T5Y3 1602 aa21.11■□□□□ 0.97
HERPUD1-202ENST00000344114 SOCS7O14512 581 aa21.1■□□□□ 0.97
HERPUD1-202ENST00000344114 SUPT6HQ7KZ85 1726 aaKnown RBP21.1■□□□□ 0.97
HERPUD1-202ENST00000344114 SYCP2Q9BX26 1530 aa21.09■□□□□ 0.97
HERPUD1-202ENST00000344114 ZNF142P52746 1687 aaPredicted RBP21.09■□□□□ 0.97
HERPUD1-202ENST00000344114 FYCO1Q9BQS8 1478 aa21.09■□□□□ 0.97
HERPUD1-202ENST00000344114 PLXNC1O60486 1568 aa21.07■□□□□ 0.96
HERPUD1-202ENST00000344114 GPATCH8Q9UKJ3 1502 aaKnown RBP21.06■□□□□ 0.96
HERPUD1-202ENST00000344114 INO80Q9ULG1 1556 aaPredicted RBP21.06■□□□□ 0.96
HERPUD1-202ENST00000344114 CLTCQ00610 1675 aaKnown RBP21.06■□□□□ 0.96
HERPUD1-202ENST00000344114 ZMYM3Q14202 1370 aa21.06■□□□□ 0.96
HERPUD1-202ENST00000344114 ATP7AQ04656 1500 aa21.06■□□□□ 0.96
HERPUD1-202ENST00000344114 MYO3AQ8NEV4 1616 aa21.05■□□□□ 0.96
HERPUD1-202ENST00000344114 KIAA1107Q9UPP5 1409 aa21.02■□□□□ 0.96
HERPUD1-202ENST00000344114 SPAG9O60271 1321 aaKnown RBP21.02■□□□□ 0.96
HERPUD1-202ENST00000344114 PLA2R1Q13018 1463 aa21.02■□□□□ 0.95
HERPUD1-202ENST00000344114 VPS8Q8N3P4 1428 aa21.01■□□□□ 0.95
HERPUD1-202ENST00000344114 CEP170BQ9Y4F5 1589 aaPredicted RBP21■□□□□ 0.95
HERPUD1-202ENST00000344114 ZNF777Q9ULD5 760 aaPredicted RBP21■□□□□ 0.95
HERPUD1-202ENST00000344114 A2MP01023 1474 aa21■□□□□ 0.95
HERPUD1-202ENST00000344114 PLEKHH2Q8IVE3 1493 aa21■□□□□ 0.95
HERPUD1-202ENST00000344114 HNRNPMP52272 730 aaKnown RBP eCLIP20.99■□□□□ 0.95
HERPUD1-202ENST00000344114 TCOF1Q13428 1488 aaKnown RBP20.98■□□□□ 0.95
HERPUD1-202ENST00000344114 PTPRKQ15262 1439 aa20.98■□□□□ 0.95
HERPUD1-202ENST00000344114 NCKAP5LQ9HCH0 1330 aa20.98■□□□□ 0.95
HERPUD1-202ENST00000344114 ADGBQ8N7X0 1667 aa20.98■□□□□ 0.95
HERPUD1-202ENST00000344114 ZNF335Q9H4Z2 1342 aaPredicted RBP20.96■□□□□ 0.95
HERPUD1-202ENST00000344114 PKD2Q13563 968 aa20.96■□□□□ 0.95
HERPUD1-202ENST00000344114 CFDP1Q9UEE9 299 aaPredicted RBP20.93■□□□□ 0.94
HERPUD1-202ENST00000344114 CCNB3Q8WWL7 1395 aa20.92■□□□□ 0.94
HERPUD1-202ENST00000344114 PPP6R1Q9UPN7 881 aa20.91■□□□□ 0.94
HERPUD1-202ENST00000344114 DNMT1P26358 1616 aaKnown RBP20.9■□□□□ 0.94
HERPUD1-202ENST00000344114 TRIM26Q12899 539 aaPredicted RBP20.89■□□□□ 0.93
HERPUD1-202ENST00000344114 GGT6Q6P531 493 aa20.89■□□□□ 0.93
HERPUD1-202ENST00000344114 TIAM1Q13009 1591 aa20.89■□□□□ 0.93
HERPUD1-202ENST00000344114 A2ML1A8K2U0 1454 aa20.89■□□□□ 0.93
HERPUD1-202ENST00000344114 UBAP1LF5GYI3 381 aa20.88■□□□□ 0.93
HERPUD1-202ENST00000344114 POLR1AO95602 1720 aaPredicted RBP20.88■□□□□ 0.93
HERPUD1-202ENST00000344114 MBD5Q9P267 1494 aa20.87■□□□□ 0.93
HERPUD1-202ENST00000344114 RTEL1-TNFRSF6BF6WH68 1400 aa20.86■□□□□ 0.93
HERPUD1-202ENST00000344114 MTUS2Q5JR59 1369 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms