RNA–Protein interactions for RNA: ENST00000336708.11

TRIM16-201, Transcript of tripartite motif containing 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM16, Length 2,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM16-201ENST00000336708 ABCC5O15440 1437 aa14.07□□□□□ -0.16
TRIM16-201ENST00000336708 PPP1R15AO75807 674 aaPredicted RBP14.07□□□□□ -0.16
TRIM16-201ENST00000336708 ADGBQ8N7X0 1667 aa14.07□□□□□ -0.16
TRIM16-201ENST00000336708 CHD1O14646 1710 aa14.06□□□□□ -0.16
TRIM16-201ENST00000336708 SHROOM2Q13796 1616 aa14.06□□□□□ -0.16
TRIM16-201ENST00000336708 PRG4Q92954 1404 aaPredicted RBP14.06□□□□□ -0.16
TRIM16-201ENST00000336708 GPATCH8Q9UKJ3 1502 aaKnown RBP14.05□□□□□ -0.16
TRIM16-201ENST00000336708 CAMSAP2Q08AD1 1489 aa14.03□□□□□ -0.16
TRIM16-201ENST00000336708 CDC42BPAQ5VT25 1732 aa14.03□□□□□ -0.16
TRIM16-201ENST00000336708 ADGRL2O95490 1459 aa14.02□□□□□ -0.17
TRIM16-201ENST00000336708 ABCC10Q5T3U5 1492 aa14.02□□□□□ -0.17
TRIM16-201ENST00000336708 ARID3CA6NKF2 412 aa14.01□□□□□ -0.17
TRIM16-201ENST00000336708 FBLN2P98095 1184 aa14.01□□□□□ -0.17
TRIM16-201ENST00000336708 ATP10BO94823 1461 aa14.01□□□□□ -0.17
TRIM16-201ENST00000336708 RRP7BPQ9NSQ0 103 aa14.01□□□□□ -0.17
TRIM16-201ENST00000336708 TONSLQ96HA7 1378 aa14□□□□□ -0.17
TRIM16-201ENST00000336708 CHIC2Q9UKJ5 165 aa13.99□□□□□ -0.17
TRIM16-201ENST00000336708 ZNF644Q9H582 1327 aaPredicted RBP13.97□□□□□ -0.17
TRIM16-201ENST00000336708 CLASP1Q7Z460 1538 aa13.96□□□□□ -0.17
TRIM16-201ENST00000336708 SHANK2Q9UPX8 1470 aa13.96□□□□□ -0.18
TRIM16-201ENST00000336708 NCOA1Q15788 1441 aa13.95□□□□□ -0.18
TRIM16-201ENST00000336708 MPHOSPH9Q99550 1183 aa13.94□□□□□ -0.18
TRIM16-201ENST00000336708 ARHGEF5Q12774 1597 aa13.93□□□□□ -0.18
TRIM16-201ENST00000336708 CFDP1Q9UEE9 299 aaPredicted RBP13.93□□□□□ -0.18
TRIM16-201ENST00000336708 PTPRGP23470 1445 aa13.93□□□□□ -0.18
TRIM16-201ENST00000336708 ANKRD30BQ9BXX2 1392 aa13.92□□□□□ -0.18
TRIM16-201ENST00000336708 PREX2Q70Z35 1606 aa13.92□□□□□ -0.18
TRIM16-201ENST00000336708 PZPP20742 1482 aa13.92□□□□□ -0.18
TRIM16-201ENST00000336708 RPRD2Q5VT52 1461 aaKnown RBP13.91□□□□□ -0.18
TRIM16-201ENST00000336708 CDC42BPBQ9Y5S2 1711 aa13.91□□□□□ -0.18
TRIM16-201ENST00000336708 PLEKHD1A6NEE1 506 aa13.91□□□□□ -0.18
TRIM16-201ENST00000336708 TRIM52Q96A61 297 aa13.9□□□□□ -0.18
TRIM16-201ENST00000336708 TEX14Q8IWB6 1497 aa13.88□□□□□ -0.19
TRIM16-201ENST00000336708 KDM5DQ9BY66 1539 aa13.88□□□□□ -0.19
TRIM16-201ENST00000336708 ABCC2Q92887 1545 aa13.87□□□□□ -0.19
TRIM16-201ENST00000336708 ANKRD30AQ9BXX3 1397 aa13.87□□□□□ -0.19
TRIM16-201ENST00000336708 SAMD9LQ8IVG5 1584 aa13.87□□□□□ -0.19
TRIM16-201ENST00000336708 MBD5Q9P267 1494 aa13.86□□□□□ -0.19
TRIM16-201ENST00000336708 ERCC6L2Q5T890 1561 aa13.86□□□□□ -0.19
TRIM16-201ENST00000336708 ANP32EQ9BTT0 268 aa13.86□□□□□ -0.19
TRIM16-201ENST00000336708 C9orf84Q5VXU9 1444 aa13.85□□□□□ -0.19
TRIM16-201ENST00000336708 MAST1Q9Y2H9 1570 aa13.84□□□□□ -0.19
TRIM16-201ENST00000336708 TTC37Q6PGP7 1564 aa13.83□□□□□ -0.2
TRIM16-201ENST00000336708 DDX10Q13206 875 aaKnown RBP13.83□□□□□ -0.2
TRIM16-201ENST00000336708 UHRF1BP1LA0JNW5 1464 aa13.82□□□□□ -0.2
TRIM16-201ENST00000336708 ANKRD50Q9ULJ7 1429 aa13.82□□□□□ -0.2
TRIM16-201ENST00000336708 KIAA1107Q9UPP5 1409 aa13.82□□□□□ -0.2
TRIM16-201ENST00000336708 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.82□□□□□ -0.2
TRIM16-201ENST00000336708 POLR1AO95602 1720 aaPredicted RBP13.82□□□□□ -0.2
TRIM16-201ENST00000336708 MYO5CQ9NQX4 1742 aa13.82□□□□□ -0.2
TRIM16-201ENST00000336708 L3MBTL2Q969R5 705 aa13.8□□□□□ -0.2
TRIM16-201ENST00000336708 CCDC141Q6ZP82 1450 aa13.8□□□□□ -0.2
TRIM16-201ENST00000336708 SLC4A1APQ9BWU0 796 aaKnown RBP13.8□□□□□ -0.2
TRIM16-201ENST00000336708 ZNF777Q9ULD5 760 aaPredicted RBP13.8□□□□□ -0.2
TRIM16-201ENST00000336708 FOXD1Q16676 465 aa13.8□□□□□ -0.2
TRIM16-201ENST00000336708 ZCCHC11Q5TAX3 1644 aaKnown RBP13.79□□□□□ -0.2
TRIM16-201ENST00000336708 CCER2I3L3R5 266 aa13.78□□□□□ -0.2
TRIM16-201ENST00000336708 HIRIP3Q9BW71 556 aaPredicted RBP13.78□□□□□ -0.2
TRIM16-201ENST00000336708 PLXNC1O60486 1568 aa13.77□□□□□ -0.2
TRIM16-201ENST00000336708 RSPH4AQ5TD94 716 aa13.77□□□□□ -0.21
TRIM16-201ENST00000336708 UNC13BO14795 1591 aa13.76□□□□□ -0.21
TRIM16-201ENST00000336708 SPATA31E1Q6ZUB1 1445 aa13.76□□□□□ -0.21
TRIM16-201ENST00000336708 HSPA5P11021 654 aaKnown RBP13.75□□□□□ -0.21
TRIM16-201ENST00000336708 SYCP2Q9BX26 1530 aa13.75□□□□□ -0.21
TRIM16-201ENST00000336708 PLEKHH2Q8IVE3 1493 aa13.75□□□□□ -0.21
TRIM16-201ENST00000336708 KIF15Q9NS87 1388 aa13.74□□□□□ -0.21
TRIM16-201ENST00000336708 ARHGAP5Q13017 1502 aa13.74□□□□□ -0.21
TRIM16-201ENST00000336708 KCNH8Q96L42 1107 aa13.74□□□□□ -0.21
TRIM16-201ENST00000336708 TSPY4P0CV99 314 aa13.73□□□□□ -0.21
TRIM16-201ENST00000336708 TSPY10P0CW01 314 aa13.73□□□□□ -0.21
TRIM16-201ENST00000336708 EIF4G2P78344 907 aaKnown RBP eCLIP13.73□□□□□ -0.21
TRIM16-201ENST00000336708 NBPF8Q3BBV2 869 aa13.73□□□□□ -0.21
TRIM16-201ENST00000336708 OSCARQ8IYS5 282 aa13.73□□□□□ -0.21
TRIM16-201ENST00000336708 ARHGEF12Q9NZN5 1544 aa13.73□□□□□ -0.21
TRIM16-201ENST00000336708 WASHC2AQ641Q2 1341 aa13.72□□□□□ -0.21
TRIM16-201ENST00000336708 HNRNPMP52272 730 aaKnown RBP eCLIP13.72□□□□□ -0.21
TRIM16-201ENST00000336708 UHRF1BP1Q6BDS2 1440 aa13.72□□□□□ -0.21
TRIM16-201ENST00000336708 ARAP3Q8WWN8 1544 aa13.71□□□□□ -0.21
TRIM16-201ENST00000336708 ANP32CO43423 234 aa13.71□□□□□ -0.21
TRIM16-201ENST00000336708 TSHZ2Q9NRE2 1034 aa13.71□□□□□ -0.21
TRIM16-201ENST00000336708 PRKCSHP14314 528 aaPredicted RBP13.7□□□□□ -0.22
TRIM16-201ENST00000336708 PKD2Q13563 968 aa13.7□□□□□ -0.22
TRIM16-201ENST00000336708 NUP155O75694 1391 aa13.7□□□□□ -0.22
TRIM16-201ENST00000336708 PLCH2O75038 1416 aa13.7□□□□□ -0.22
TRIM16-201ENST00000336708 FAM135AQ9P2D6 1515 aa13.7□□□□□ -0.22
TRIM16-201ENST00000336708 IQGAP3Q86VI3 1631 aa13.69□□□□□ -0.22
TRIM16-201ENST00000336708 BCANQ96GW7 911 aa13.69□□□□□ -0.22
TRIM16-201ENST00000336708 SUPT16HQ9Y5B9 1047 aaKnown RBP13.69□□□□□ -0.22
TRIM16-201ENST00000336708 MAGI2Q86UL8 1455 aa13.69□□□□□ -0.22
TRIM16-201ENST00000336708 ABCC1P33527 1531 aa13.68□□□□□ -0.22
TRIM16-201ENST00000336708 CNTLNQ9NXG0 1405 aa13.68□□□□□ -0.22
TRIM16-201ENST00000336708 KDM5CP41229 1560 aa13.68□□□□□ -0.22
TRIM16-201ENST00000336708 CCDC7Q96M83 1385 aa13.67□□□□□ -0.22
TRIM16-201ENST00000336708 DUOX2Q9NRD8 1548 aa13.67□□□□□ -0.22
TRIM16-201ENST00000336708 RALGAPBQ86X10 1494 aa13.66□□□□□ -0.22
TRIM16-201ENST00000336708 ERBINQ96RT1 1412 aa13.64□□□□□ -0.23
TRIM16-201ENST00000336708 BCORL1Q5H9F3 1711 aa13.64□□□□□ -0.23
TRIM16-201ENST00000336708 C11orf95C9JLR9 678 aaPredicted RBP13.63□□□□□ -0.23
TRIM16-201ENST00000336708 ABCA9Q8IUA7 1624 aa13.63□□□□□ -0.23
TRIM16-201ENST00000336708 ATP10AO60312 1499 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms