RNA–Protein interactions for RNA: ENST00000335005.10

ITM2C-203, Transcript of integral membrane protein 2C, humanhuman

TSL 1 (best) BASIC

Gene ITM2C, Length 1,889 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-203ENST00000335005 PRG4Q92954 1404 aaPredicted RBP33.58■■■□□ 2.97
ITM2C-203ENST00000335005 CHIC2Q9UKJ5 165 aa33.58■■■□□ 2.97
ITM2C-203ENST00000335005 KIF14Q15058 1648 aa33.56■■■□□ 2.96
ITM2C-203ENST00000335005 FBLN2P98095 1184 aa33.55■■■□□ 2.96
ITM2C-203ENST00000335005 ADGBQ8N7X0 1667 aa33.54■■■□□ 2.96
ITM2C-203ENST00000335005 CAMSAP2Q08AD1 1489 aa33.53■■■□□ 2.96
ITM2C-203ENST00000335005 GPATCH8Q9UKJ3 1502 aaKnown RBP33.53■■■□□ 2.96
ITM2C-203ENST00000335005 CROCC2H7BZ55 1655 aa33.53■■■□□ 2.96
ITM2C-203ENST00000335005 ADGRL2O95490 1459 aa33.45■■■□□ 2.94
ITM2C-203ENST00000335005 CDC42BPAQ5VT25 1732 aa33.44■■■□□ 2.94
ITM2C-203ENST00000335005 ZNF644Q9H582 1327 aaPredicted RBP33.43■■■□□ 2.94
ITM2C-203ENST00000335005 CHD1O14646 1710 aa33.42■■■□□ 2.94
ITM2C-203ENST00000335005 ATP10BO94823 1461 aa33.41■■■□□ 2.94
ITM2C-203ENST00000335005 ABCC10Q5T3U5 1492 aa33.41■■■□□ 2.94
ITM2C-203ENST00000335005 MPHOSPH9Q99550 1183 aa33.41■■■□□ 2.94
ITM2C-203ENST00000335005 TRIM52Q96A61 297 aa33.39■■■□□ 2.94
ITM2C-203ENST00000335005 CFDP1Q9UEE9 299 aaPredicted RBP33.37■■■□□ 2.93
ITM2C-203ENST00000335005 SHROOM2Q13796 1616 aa33.37■■■□□ 2.93
ITM2C-203ENST00000335005 NCOA1Q15788 1441 aa33.34■■■□□ 2.93
ITM2C-203ENST00000335005 ANKRD30BQ9BXX2 1392 aa33.31■■■□□ 2.92
ITM2C-203ENST00000335005 SHANK2Q9UPX8 1470 aa33.31■■■□□ 2.92
ITM2C-203ENST00000335005 DDX10Q13206 875 aaKnown RBP33.3■■■□□ 2.92
ITM2C-203ENST00000335005 RPRD2Q5VT52 1461 aaKnown RBP33.29■■■□□ 2.92
ITM2C-203ENST00000335005 PLEKHD1A6NEE1 506 aa33.29■■■□□ 2.92
ITM2C-203ENST00000335005 PTPRGP23470 1445 aa33.26■■■□□ 2.91
ITM2C-203ENST00000335005 PZPP20742 1482 aa33.25■■■□□ 2.91
ITM2C-203ENST00000335005 TEX14Q8IWB6 1497 aa33.21■■■□□ 2.91
ITM2C-203ENST00000335005 ARHGEF5Q12774 1597 aa33.2■■■□□ 2.91
ITM2C-203ENST00000335005 ANKRD30AQ9BXX3 1397 aa33.2■■■□□ 2.91
ITM2C-203ENST00000335005 PREX2Q70Z35 1606 aa33.16■■■□□ 2.9
ITM2C-203ENST00000335005 HIRIP3Q9BW71 556 aaPredicted RBP33.16■■■□□ 2.9
ITM2C-203ENST00000335005 CCER2I3L3R5 266 aa33.12■■■□□ 2.89
ITM2C-203ENST00000335005 CDC42BPBQ9Y5S2 1711 aa33.12■■■□□ 2.89
ITM2C-203ENST00000335005 L3MBTL2Q969R5 705 aa33.12■■■□□ 2.89
ITM2C-203ENST00000335005 SLC4A1APQ9BWU0 796 aaKnown RBP33.12■■■□□ 2.89
ITM2C-203ENST00000335005 C9orf84Q5VXU9 1444 aa33.11■■■□□ 2.89
ITM2C-203ENST00000335005 ZNF777Q9ULD5 760 aaPredicted RBP33.11■■■□□ 2.89
ITM2C-203ENST00000335005 KDM5DQ9BY66 1539 aa33.1■■■□□ 2.89
ITM2C-203ENST00000335005 FOXD1Q16676 465 aa33.1■■■□□ 2.89
ITM2C-203ENST00000335005 ANKRD50Q9ULJ7 1429 aa33.09■■■□□ 2.89
ITM2C-203ENST00000335005 PELP1Q8IZL8 1130 aaKnown RBP33.08■■■□□ 2.89
ITM2C-203ENST00000335005 KIAA1107Q9UPP5 1409 aa33.08■■■□□ 2.89
ITM2C-203ENST00000335005 SAMD9LQ8IVG5 1584 aa33.06■■■□□ 2.88
ITM2C-203ENST00000335005 MBD5Q9P267 1494 aa33.05■■■□□ 2.88
ITM2C-203ENST00000335005 KCNH8Q96L42 1107 aa33.05■■■□□ 2.88
ITM2C-203ENST00000335005 ABCC2Q92887 1545 aa33.04■■■□□ 2.88
ITM2C-203ENST00000335005 ANP32CO43423 234 aa33.03■■■□□ 2.88
ITM2C-203ENST00000335005 HSPA5P11021 654 aaKnown RBP33.02■■■□□ 2.88
ITM2C-203ENST00000335005 EIF4G2P78344 907 aaKnown RBP eCLIP33■■■□□ 2.87
ITM2C-203ENST00000335005 CLASP1Q7Z460 1538 aa33■■■□□ 2.87
ITM2C-203ENST00000335005 POLR1AO95602 1720 aaPredicted RBP33■■■□□ 2.87
ITM2C-203ENST00000335005 CCDC141Q6ZP82 1450 aa32.98■■■□□ 2.87
ITM2C-203ENST00000335005 ERCC6L2Q5T890 1561 aa32.98■■■□□ 2.87
ITM2C-203ENST00000335005 MAST1Q9Y2H9 1570 aa32.96■■■□□ 2.87
ITM2C-203ENST00000335005 TTC37Q6PGP7 1564 aa32.96■■■□□ 2.87
ITM2C-203ENST00000335005 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.93■■■□□ 2.86
ITM2C-203ENST00000335005 WASHC2AQ641Q2 1341 aa32.93■■■□□ 2.86
ITM2C-203ENST00000335005 MYO5CQ9NQX4 1742 aa32.93■■■□□ 2.86
ITM2C-203ENST00000335005 RSPH4AQ5TD94 716 aa32.92■■■□□ 2.86
ITM2C-203ENST00000335005 TSPY4P0CV99 314 aa32.91■■■□□ 2.86
ITM2C-203ENST00000335005 TSPY10P0CW01 314 aa32.91■■■□□ 2.86
ITM2C-203ENST00000335005 NBPF8Q3BBV2 869 aa32.91■■■□□ 2.86
ITM2C-203ENST00000335005 SPATA31E1Q6ZUB1 1445 aa32.9■■■□□ 2.86
ITM2C-203ENST00000335005 KIF15Q9NS87 1388 aa32.9■■■□□ 2.86
ITM2C-203ENST00000335005 UHRF1BP1LA0JNW5 1464 aa32.88■■■□□ 2.85
ITM2C-203ENST00000335005 PKD2Q13563 968 aa32.86■■■□□ 2.85
ITM2C-203ENST00000335005 CNTLNQ9NXG0 1405 aa32.84■■■□□ 2.85
ITM2C-203ENST00000335005 NUP155O75694 1391 aa32.84■■■□□ 2.85
ITM2C-203ENST00000335005 SYCP2Q9BX26 1530 aa32.84■■■□□ 2.85
ITM2C-203ENST00000335005 HNRNPMP52272 730 aaKnown RBP eCLIP32.84■■■□□ 2.85
ITM2C-203ENST00000335005 PLEKHH2Q8IVE3 1493 aa32.83■■■□□ 2.85
ITM2C-203ENST00000335005 ARHGAP5Q13017 1502 aa32.83■■■□□ 2.85
ITM2C-203ENST00000335005 ARHGEF12Q9NZN5 1544 aa32.83■■■□□ 2.85
ITM2C-203ENST00000335005 PLXNC1O60486 1568 aa32.82■■■□□ 2.85
ITM2C-203ENST00000335005 ZCCHC11Q5TAX3 1644 aaKnown RBP32.82■■■□□ 2.84
ITM2C-203ENST00000335005 CCDC7Q96M83 1385 aa32.81■■■□□ 2.84
ITM2C-203ENST00000335005 UNC13BO14795 1591 aa32.79■■■□□ 2.84
ITM2C-203ENST00000335005 UHRF1BP1Q6BDS2 1440 aa32.79■■■□□ 2.84
ITM2C-203ENST00000335005 FAM135AQ9P2D6 1515 aa32.74■■■□□ 2.83
ITM2C-203ENST00000335005 SUPT16HQ9Y5B9 1047 aaKnown RBP32.71■■■□□ 2.83
ITM2C-203ENST00000335005 RALGAPBQ86X10 1494 aa32.7■■■□□ 2.83
ITM2C-203ENST00000335005 KDM5CP41229 1560 aa32.7■■■□□ 2.83
ITM2C-203ENST00000335005 C11orf95C9JLR9 678 aaPredicted RBP32.69■■■□□ 2.82
ITM2C-203ENST00000335005 PLCH2O75038 1416 aa32.67■■■□□ 2.82
ITM2C-203ENST00000335005 IQGAP3Q86VI3 1631 aa32.65■■■□□ 2.82
ITM2C-203ENST00000335005 ARAP3Q8WWN8 1544 aa32.64■■■□□ 2.82
ITM2C-203ENST00000335005 ABCC1P33527 1531 aa32.62■■■□□ 2.81
ITM2C-203ENST00000335005 DUOX2Q9NRD8 1548 aa32.62■■■□□ 2.81
ITM2C-203ENST00000335005 KIF7Q2M1P5 1343 aa32.62■■■□□ 2.81
ITM2C-203ENST00000335005 MAGI2Q86UL8 1455 aa32.61■■■□□ 2.81
ITM2C-203ENST00000335005 BCORL1Q5H9F3 1711 aa32.61■■■□□ 2.81
ITM2C-203ENST00000335005 USP47Q96K76 1375 aa32.59■■■□□ 2.81
ITM2C-203ENST00000335005 ERBINQ96RT1 1412 aa32.56■■■□□ 2.8
ITM2C-203ENST00000335005 ARID4BQ4LE39 1312 aaPredicted RBP32.55■■■□□ 2.8
ITM2C-203ENST00000335005 PRKRIP1Q9H875 184 aaPredicted RBP32.5■■■□□ 2.79
ITM2C-203ENST00000335005 EFCAB2Q5VUJ9 269 aa32.5■■■□□ 2.79
ITM2C-203ENST00000335005 ATP10AO60312 1499 aa32.48■■■□□ 2.79
ITM2C-203ENST00000335005 PLA2R1Q13018 1463 aa32.46■■■□□ 2.79
ITM2C-203ENST00000335005 CCDC144AA2RUR9 1427 aa32.46■■■□□ 2.79
ITM2C-203ENST00000335005 TRPM1Q7Z4N2 1603 aa32.45■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms