RNA–Protein interactions for RNA: ENST00000328252.3

PAPPA-201, Transcript of pappalysin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PAPPA, Length 10,959 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPPA-201ENST00000328252 CLIP1P30622 1438 aa17.51■□□□□ 0.39
PAPPA-201ENST00000328252 GZF1Q9H116 711 aaPredicted RBP17.5■□□□□ 0.39
PAPPA-201ENST00000328252 SOX12O15370 315 aa17.5■□□□□ 0.39
PAPPA-201ENST00000328252 CALRP27797 417 aaKnown RBP17.5■□□□□ 0.39
PAPPA-201ENST00000328252 SETQ01105 290 aaPredicted RBP17.49■□□□□ 0.39
PAPPA-201ENST00000328252 APBB1O00213 710 aa17.49■□□□□ 0.39
PAPPA-201ENST00000328252 HSP90B1P14625 803 aaKnown RBP17.49■□□□□ 0.39
PAPPA-201ENST00000328252 ZCCHC6Q5VYS8 1495 aaKnown RBP17.48■□□□□ 0.39
PAPPA-201ENST00000328252 RASSF8Q8NHQ8 419 aa17.48■□□□□ 0.39
PAPPA-201ENST00000328252 CREBRFQ8IUR6 639 aa17.47■□□□□ 0.39
PAPPA-201ENST00000328252 PRKCSHP14314 528 aaPredicted RBP17.47■□□□□ 0.39
PAPPA-201ENST00000328252 GPATCH3Q96I76 525 aa17.45■□□□□ 0.38
PAPPA-201ENST00000328252 CFDP1Q9UEE9 299 aaPredicted RBP17.44■□□□□ 0.38
PAPPA-201ENST00000328252 TPM3P06753 285 aa17.44■□□□□ 0.38
PAPPA-201ENST00000328252 IPO8O15397 1037 aaKnown RBP17.43■□□□□ 0.38
PAPPA-201ENST00000328252 CSPP1Q1MSJ5 1256 aa17.43■□□□□ 0.38
PAPPA-201ENST00000328252 GORABQ5T7V8 394 aa17.42■□□□□ 0.38
PAPPA-201ENST00000328252 ZNF330Q9Y3S2 320 aaPredicted RBP17.42■□□□□ 0.38
PAPPA-201ENST00000328252 SRPK2P78362 688 aaKnown RBP17.42■□□□□ 0.38
PAPPA-201ENST00000328252 CCDC180Q9P1Z9 1646 aa17.41■□□□□ 0.38
PAPPA-201ENST00000328252 TMF1P82094 1093 aa17.41■□□□□ 0.38
PAPPA-201ENST00000328252 PHF14O94880 888 aa17.4■□□□□ 0.38
PAPPA-201ENST00000328252 VPS53Q5VIR6 699 aa17.39■□□□□ 0.37
PAPPA-201ENST00000328252 ANO8Q9HCE9 1232 aaPredicted RBP17.39■□□□□ 0.37
PAPPA-201ENST00000328252 MORC1Q86VD1 984 aa17.39■□□□□ 0.37
PAPPA-201ENST00000328252 CHMP3Q9Y3E7 222 aa17.38■□□□□ 0.37
PAPPA-201ENST00000328252 SLKQ9H2G2 1235 aaPredicted RBP17.38■□□□□ 0.37
PAPPA-201ENST00000328252 KANK1Q14678 1352 aa17.37■□□□□ 0.37
PAPPA-201ENST00000328252 HDGFP51858 240 aaKnown RBP17.37■□□□□ 0.37
PAPPA-201ENST00000328252 G3V3G9 751 aa17.37■□□□□ 0.37
PAPPA-201ENST00000328252 DCAF8Q5TAQ9 597 aa17.37■□□□□ 0.37
PAPPA-201ENST00000328252 KRI1Q8N9T8 703 aaKnown RBP17.36■□□□□ 0.37
PAPPA-201ENST00000328252 CALD1Q05682 793 aaKnown RBP17.36■□□□□ 0.37
PAPPA-201ENST00000328252 TAF7LQ5H9L4 462 aa17.36■□□□□ 0.37
PAPPA-201ENST00000328252 TRIM6-TRIM34B2RNG4 842 aa17.36■□□□□ 0.37
PAPPA-201ENST00000328252 ITPRIPQ8IWB1 547 aa17.36■□□□□ 0.37
PAPPA-201ENST00000328252 GOLGA6L3A6NEY3 463 aa17.35■□□□□ 0.37
PAPPA-201ENST00000328252 PES1O00541 588 aaKnown RBP17.35■□□□□ 0.37
PAPPA-201ENST00000328252 TSR1Q2NL82 804 aaKnown RBP17.35■□□□□ 0.37
PAPPA-201ENST00000328252 FBXO3Q9UK99 471 aa17.34■□□□□ 0.37
PAPPA-201ENST00000328252 PATL2C9JE40 543 aaKnown RBP17.33■□□□□ 0.36
PAPPA-201ENST00000328252 MARCH6O60337 910 aa17.32■□□□□ 0.36
PAPPA-201ENST00000328252 TPD52L1Q16890 204 aaPredicted RBP17.32■□□□□ 0.36
PAPPA-201ENST00000328252 RWDD1Q9H446 243 aaPredicted RBP17.32■□□□□ 0.36
PAPPA-201ENST00000328252 PAK3O75914 559 aaPredicted RBP17.31■□□□□ 0.36
PAPPA-201ENST00000328252 CCDC70Q6NSX1 233 aa17.31■□□□□ 0.36
PAPPA-201ENST00000328252 VSIG10Q8N0Z9 540 aa17.3■□□□□ 0.36
PAPPA-201ENST00000328252 SAFB2Q14151 953 aaKnown RBP eCLIP17.3■□□□□ 0.36
PAPPA-201ENST00000328252 GOLGA3Q08378 1498 aa17.29■□□□□ 0.36
PAPPA-201ENST00000328252 SPAG9O60271 1321 aaKnown RBP17.29■□□□□ 0.36
PAPPA-201ENST00000328252 CSB-PGBD3P0DP91 1061 aa17.29■□□□□ 0.36
PAPPA-201ENST00000328252 DCAF11Q8TEB1 546 aa17.29■□□□□ 0.36
PAPPA-201ENST00000328252 CHMP4AQ9BY43 222 aa17.28■□□□□ 0.36
PAPPA-201ENST00000328252 CCAR2Q8N163 923 aaKnown RBP17.28■□□□□ 0.36
PAPPA-201ENST00000328252 KIF16BQ96L93 1317 aa17.28■□□□□ 0.36
PAPPA-201ENST00000328252 KIF3AQ9Y496 699 aa17.28■□□□□ 0.36
PAPPA-201ENST00000328252 PKNOX2Q96KN3 472 aa17.27■□□□□ 0.36
PAPPA-201ENST00000328252 MFAP1P55081 439 aaKnown RBP17.27■□□□□ 0.36
PAPPA-201ENST00000328252 SF3A1Q15459 793 aaKnown RBP17.27■□□□□ 0.36
PAPPA-201ENST00000328252 HDGFL2Q7Z4V5 671 aaPredicted RBP17.27■□□□□ 0.35
PAPPA-201ENST00000328252 TPM2P07951 284 aa17.26■□□□□ 0.35
PAPPA-201ENST00000328252 KTN1Q86UP2 1357 aaKnown RBP17.26■□□□□ 0.35
PAPPA-201ENST00000328252 STK31Q9BXU1 1019 aa17.26■□□□□ 0.35
PAPPA-201ENST00000328252 GPS2Q13227 327 aa17.26■□□□□ 0.35
PAPPA-201ENST00000328252 HDAC5Q9UQL6 1122 aa17.26■□□□□ 0.35
PAPPA-201ENST00000328252 WWC1Q8IX03 1113 aa17.25■□□□□ 0.35
PAPPA-201ENST00000328252 TPM1P09493 284 aa17.25■□□□□ 0.35
PAPPA-201ENST00000328252 HMMRO75330 724 aa17.25■□□□□ 0.35
PAPPA-201ENST00000328252 NOL8Q76FK4 1167 aaKnown RBP17.25■□□□□ 0.35
PAPPA-201ENST00000328252 TOMM22Q9NS69 142 aa17.25■□□□□ 0.35
PAPPA-201ENST00000328252 TCERG1O14776 1098 aaKnown RBP17.24■□□□□ 0.35
PAPPA-201ENST00000328252 RRP12Q5JTH9 1297 aaKnown RBP17.24■□□□□ 0.35
PAPPA-201ENST00000328252 TCEAL9Q9UHQ7 104 aa17.24■□□□□ 0.35
PAPPA-201ENST00000328252 FRAT2O75474 233 aaPredicted RBP17.24■□□□□ 0.35
PAPPA-201ENST00000328252 PMFBP1Q8TBY8 1022 aa17.24■□□□□ 0.35
PAPPA-201ENST00000328252 RBM19Q9Y4C8 960 aaKnown RBP17.24■□□□□ 0.35
PAPPA-201ENST00000328252 HSP90AA2PQ14568 343 aaPredicted RBP17.24■□□□□ 0.35
PAPPA-201ENST00000328252 ST18O60284 1047 aa17.23■□□□□ 0.35
PAPPA-201ENST00000328252 GOLGA6L19H0YKK7 550 aa17.22■□□□□ 0.35
PAPPA-201ENST00000328252 H3BQV1 296 aa17.22■□□□□ 0.35
PAPPA-201ENST00000328252 IFFO2Q5TF58 517 aa17.22■□□□□ 0.35
PAPPA-201ENST00000328252 CEP162Q5TB80 1403 aa17.22■□□□□ 0.35
PAPPA-201ENST00000328252 APPP05067 770 aa17.21■□□□□ 0.35
PAPPA-201ENST00000328252 MLECQ14165 292 aa17.21■□□□□ 0.35
PAPPA-201ENST00000328252 U2AF1L5P0DN76 240 aaPredicted RBP17.2■□□□□ 0.34
PAPPA-201ENST00000328252 U2AF1Q01081 240 aaKnown RBP eCLIP17.2■□□□□ 0.34
PAPPA-201ENST00000328252 STK26Q9P289 416 aa17.2■□□□□ 0.34
PAPPA-201ENST00000328252 RCAN3Q9UKA8 241 aa17.2■□□□□ 0.34
PAPPA-201ENST00000328252 CNKSR2Q8WXI2 1034 aa17.2■□□□□ 0.34
PAPPA-201ENST00000328252 FOXD4L1Q9NU39 408 aa17.19■□□□□ 0.34
PAPPA-201ENST00000328252 CCDC9Q9Y3X0 531 aaKnown RBP17.19■□□□□ 0.34
PAPPA-201ENST00000328252 SIN3AQ96ST3 1273 aa17.18■□□□□ 0.34
PAPPA-201ENST00000328252 AKAP17AQ02040 695 aaKnown RBP17.17■□□□□ 0.34
PAPPA-201ENST00000328252 SMC4Q9NTJ3 1288 aa17.17■□□□□ 0.34
PAPPA-201ENST00000328252 FOXD4L5Q5VV16 416 aaPredicted RBP17.17■□□□□ 0.34
PAPPA-201ENST00000328252 FOXD4L4Q8WXT5 416 aaPredicted RBP17.17■□□□□ 0.34
PAPPA-201ENST00000328252 SLC4A10Q6U841 1118 aa17.16■□□□□ 0.34
PAPPA-201ENST00000328252 CCNB3Q8WWL7 1395 aa17.16■□□□□ 0.34
PAPPA-201ENST00000328252 ZNF771Q7L3S4 317 aaPredicted RBP17.16■□□□□ 0.34
PAPPA-201ENST00000328252 DDX11L8A8MPP1 907 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms