RNA–Protein interactions for RNA: ENST00000326925.10

NDUFAF3-202, Transcript of NADH:ubiquinone oxidoreductase complex assembly factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFAF3, Length 2,012 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3-202ENST00000326925 PLEKHD1A6NEE1 506 aa29.74■■■□□ 2.35
NDUFAF3-202ENST00000326925 PTPRGP23470 1445 aa29.73■■■□□ 2.35
NDUFAF3-202ENST00000326925 CFDP1Q9UEE9 299 aaPredicted RBP29.73■■■□□ 2.35
NDUFAF3-202ENST00000326925 TONSLQ96HA7 1378 aa29.73■■■□□ 2.35
NDUFAF3-202ENST00000326925 CAMSAP2Q08AD1 1489 aa29.73■■■□□ 2.35
NDUFAF3-202ENST00000326925 KDM6BO15054 1643 aa29.73■■■□□ 2.35
NDUFAF3-202ENST00000326925 ZNF644Q9H582 1327 aaPredicted RBP29.72■■■□□ 2.35
NDUFAF3-202ENST00000326925 SHROOM2Q13796 1616 aa29.72■■■□□ 2.35
NDUFAF3-202ENST00000326925 TRIM52Q96A61 297 aa29.67■■■□□ 2.34
NDUFAF3-202ENST00000326925 ABCC10Q5T3U5 1492 aa29.64■■■□□ 2.34
NDUFAF3-202ENST00000326925 ADGBQ8N7X0 1667 aa29.63■■■□□ 2.33
NDUFAF3-202ENST00000326925 CDC42BPAQ5VT25 1732 aa29.63■■■□□ 2.33
NDUFAF3-202ENST00000326925 DENND4BO75064 1496 aaPredicted RBP29.62■■■□□ 2.33
NDUFAF3-202ENST00000326925 CROCC2H7BZ55 1655 aa29.61■■■□□ 2.33
NDUFAF3-202ENST00000326925 MPHOSPH9Q99550 1183 aa29.6■■■□□ 2.33
NDUFAF3-202ENST00000326925 SCAF1Q9H7N4 1312 aaKnown RBP29.58■■■□□ 2.33
NDUFAF3-202ENST00000326925 ADGRL2O95490 1459 aa29.58■■■□□ 2.33
NDUFAF3-202ENST00000326925 ZNF777Q9ULD5 760 aaPredicted RBP29.55■■■□□ 2.32
NDUFAF3-202ENST00000326925 NCOA1Q15788 1441 aa29.55■■■□□ 2.32
NDUFAF3-202ENST00000326925 KDM5BQ9UGL1 1544 aa29.5■■■□□ 2.31
NDUFAF3-202ENST00000326925 ANKRD30AQ9BXX3 1397 aa29.5■■■□□ 2.31
NDUFAF3-202ENST00000326925 SHANK2Q9UPX8 1470 aa29.49■■■□□ 2.31
NDUFAF3-202ENST00000326925 YTHDC1Q96MU7 727 aaKnown RBP29.48■■■□□ 2.31
NDUFAF3-202ENST00000326925 CLASP1Q7Z460 1538 aa29.47■■■□□ 2.31
NDUFAF3-202ENST00000326925 ABCC2Q92887 1545 aa29.45■■■□□ 2.31
NDUFAF3-202ENST00000326925 ERCC6L2Q5T890 1561 aa29.44■■■□□ 2.3
NDUFAF3-202ENST00000326925 ANKRD30BQ9BXX2 1392 aa29.43■■■□□ 2.3
NDUFAF3-202ENST00000326925 ARHGEF5Q12774 1597 aa29.41■■■□□ 2.3
NDUFAF3-202ENST00000326925 PREX2Q70Z35 1606 aa29.41■■■□□ 2.3
NDUFAF3-202ENST00000326925 SLC4A1APQ9BWU0 796 aaKnown RBP29.4■■■□□ 2.3
NDUFAF3-202ENST00000326925 C9orf84Q5VXU9 1444 aa29.39■■■□□ 2.3
NDUFAF3-202ENST00000326925 CDC42BPBQ9Y5S2 1711 aa29.37■■■□□ 2.29
NDUFAF3-202ENST00000326925 PZPP20742 1482 aa29.37■■■□□ 2.29
NDUFAF3-202ENST00000326925 RPRD2Q5VT52 1461 aaKnown RBP29.37■■■□□ 2.29
NDUFAF3-202ENST00000326925 ANKRD50Q9ULJ7 1429 aa29.36■■■□□ 2.29
NDUFAF3-202ENST00000326925 TSPY4P0CV99 314 aa29.35■■■□□ 2.29
NDUFAF3-202ENST00000326925 TSPY10P0CW01 314 aa29.35■■■□□ 2.29
NDUFAF3-202ENST00000326925 FOXD1Q16676 465 aa29.35■■■□□ 2.29
NDUFAF3-202ENST00000326925 MBD5Q9P267 1494 aa29.32■■■□□ 2.28
NDUFAF3-202ENST00000326925 SAMD9LQ8IVG5 1584 aa29.32■■■□□ 2.28
NDUFAF3-202ENST00000326925 RSPH4AQ5TD94 716 aa29.32■■■□□ 2.28
NDUFAF3-202ENST00000326925 UHRF1BP1LA0JNW5 1464 aa29.32■■■□□ 2.28
NDUFAF3-202ENST00000326925 DDX10Q13206 875 aaKnown RBP29.32■■■□□ 2.28
NDUFAF3-202ENST00000326925 CCDC141Q6ZP82 1450 aa29.29■■■□□ 2.28
NDUFAF3-202ENST00000326925 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.29■■■□□ 2.28
NDUFAF3-202ENST00000326925 L3MBTL2Q969R5 705 aa29.28■■■□□ 2.28
NDUFAF3-202ENST00000326925 TTC37Q6PGP7 1564 aa29.28■■■□□ 2.28
NDUFAF3-202ENST00000326925 HIRIP3Q9BW71 556 aaPredicted RBP29.28■■■□□ 2.28
NDUFAF3-202ENST00000326925 HNRNPMP52272 730 aaKnown RBP eCLIP29.27■■■□□ 2.28
NDUFAF3-202ENST00000326925 KIAA1107Q9UPP5 1409 aa29.27■■■□□ 2.28
NDUFAF3-202ENST00000326925 PELP1Q8IZL8 1130 aaKnown RBP29.26■■■□□ 2.27
NDUFAF3-202ENST00000326925 GTF3C3Q9Y5Q9 886 aa29.26■■■□□ 2.27
NDUFAF3-202ENST00000326925 MYO5CQ9NQX4 1742 aa29.25■■■□□ 2.27
NDUFAF3-202ENST00000326925 TEX14Q8IWB6 1497 aa29.25■■■□□ 2.27
NDUFAF3-202ENST00000326925 ARHGAP5Q13017 1502 aa29.24■■■□□ 2.27
NDUFAF3-202ENST00000326925 ZCCHC11Q5TAX3 1644 aaKnown RBP29.24■■■□□ 2.27
NDUFAF3-202ENST00000326925 KDM5DQ9BY66 1539 aa29.22■■■□□ 2.27
NDUFAF3-202ENST00000326925 KIF15Q9NS87 1388 aa29.22■■■□□ 2.27
NDUFAF3-202ENST00000326925 PLEKHH2Q8IVE3 1493 aa29.2■■■□□ 2.27
NDUFAF3-202ENST00000326925 MAST1Q9Y2H9 1570 aa29.19■■■□□ 2.26
NDUFAF3-202ENST00000326925 SYCP2Q9BX26 1530 aa29.17■■■□□ 2.26
NDUFAF3-202ENST00000326925 PKD2Q13563 968 aa29.17■■■□□ 2.26
NDUFAF3-202ENST00000326925 NUP155O75694 1391 aa29.16■■■□□ 2.26
NDUFAF3-202ENST00000326925 EIF4G2P78344 907 aaKnown RBP eCLIP29.15■■■□□ 2.26
NDUFAF3-202ENST00000326925 HSPA5P11021 654 aaKnown RBP29.13■■■□□ 2.25
NDUFAF3-202ENST00000326925 PLCH2O75038 1416 aa29.11■■■□□ 2.25
NDUFAF3-202ENST00000326925 KCNH8Q96L42 1107 aa29.1■■■□□ 2.25
NDUFAF3-202ENST00000326925 ANP32CO43423 234 aa29.08■■■□□ 2.25
NDUFAF3-202ENST00000326925 PLXNC1O60486 1568 aa29.07■■■□□ 2.24
NDUFAF3-202ENST00000326925 NBPF8Q3BBV2 869 aa29.06■■■□□ 2.24
NDUFAF3-202ENST00000326925 OSCARQ8IYS5 282 aa29.06■■■□□ 2.24
NDUFAF3-202ENST00000326925 CCER2I3L3R5 266 aa29.04■■■□□ 2.24
NDUFAF3-202ENST00000326925 EFCAB2Q5VUJ9 269 aa29.03■■■□□ 2.24
NDUFAF3-202ENST00000326925 ARAP3Q8WWN8 1544 aa29.01■■■□□ 2.23
NDUFAF3-202ENST00000326925 UNC13BO14795 1591 aa29■■■□□ 2.23
NDUFAF3-202ENST00000326925 FAM135AQ9P2D6 1515 aa28.99■■■□□ 2.23
NDUFAF3-202ENST00000326925 WASHC2AQ641Q2 1341 aa28.99■■■□□ 2.23
NDUFAF3-202ENST00000326925 ARHGEF12Q9NZN5 1544 aa28.98■■■□□ 2.23
NDUFAF3-202ENST00000326925 ABCC1P33527 1531 aa28.97■■■□□ 2.23
NDUFAF3-202ENST00000326925 DUOX2Q9NRD8 1548 aa28.96■■■□□ 2.23
NDUFAF3-202ENST00000326925 SPATA31E1Q6ZUB1 1445 aa28.95■■■□□ 2.22
NDUFAF3-202ENST00000326925 WDR7Q9Y4E6 1490 aa28.94■■■□□ 2.22
NDUFAF3-202ENST00000326925 UHRF1BP1Q6BDS2 1440 aa28.92■■■□□ 2.22
NDUFAF3-202ENST00000326925 ERBINQ96RT1 1412 aa28.91■■■□□ 2.22
NDUFAF3-202ENST00000326925 POLR1AO95602 1720 aaPredicted RBP28.9■■■□□ 2.22
NDUFAF3-202ENST00000326925 IQGAP3Q86VI3 1631 aa28.89■■■□□ 2.21
NDUFAF3-202ENST00000326925 CCDC7Q96M83 1385 aa28.88■■■□□ 2.21
NDUFAF3-202ENST00000326925 CNTLNQ9NXG0 1405 aa28.85■■■□□ 2.21
NDUFAF3-202ENST00000326925 MAGI2Q86UL8 1455 aa28.85■■■□□ 2.21
NDUFAF3-202ENST00000326925 TRAPPC8Q9Y2L5 1435 aa28.84■■■□□ 2.21
NDUFAF3-202ENST00000326925 ABCA9Q8IUA7 1624 aa28.84■■■□□ 2.21
NDUFAF3-202ENST00000326925 RTEL1-TNFRSF6BF6WH68 1400 aa28.83■■■□□ 2.21
NDUFAF3-202ENST00000326925 RALGAPBQ86X10 1494 aa28.82■■■□□ 2.2
NDUFAF3-202ENST00000326925 C11orf95C9JLR9 678 aaPredicted RBP28.81■■■□□ 2.2
NDUFAF3-202ENST00000326925 CCDC144AA2RUR9 1427 aa28.79■■■□□ 2.2
NDUFAF3-202ENST00000326925 ZNF326Q5BKZ1 582 aaKnown RBP28.79■■■□□ 2.2
NDUFAF3-202ENST00000326925 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.78■■■□□ 2.23e-6■■□□□ 11.8
NDUFAF3-202ENST00000326925 SPAG9O60271 1321 aaKnown RBP28.78■■■□□ 2.2
NDUFAF3-202ENST00000326925 USP47Q96K76 1375 aa28.78■■■□□ 2.2
NDUFAF3-202ENST00000326925 KDM5CP41229 1560 aa28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms