RNA–Protein interactions for RNA: ENST00000324856.11

ARID1A-201, Transcript of AT-rich interaction domain 1A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ARID1A, Length 8,577 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1A-201ENST00000324856 TIMELESSQ9UNS1 1208 aa23.04■■□□□ 1.28
ARID1A-201ENST00000324856 CARD11Q9BXL7 1154 aa23.03■■□□□ 1.28
ARID1A-201ENST00000324856 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.01■■□□□ 1.27
ARID1A-201ENST00000324856 RWDD1Q9H446 243 aaPredicted RBP23■■□□□ 1.27
ARID1A-201ENST00000324856 APPP05067 770 aa23■■□□□ 1.27
ARID1A-201ENST00000324856 PMFBP1Q8TBY8 1022 aa22.98■■□□□ 1.27
ARID1A-201ENST00000324856 ZCCHC6Q5VYS8 1495 aaKnown RBP22.98■■□□□ 1.27
ARID1A-201ENST00000324856 KIF16BQ96L93 1317 aa22.97■■□□□ 1.27
ARID1A-201ENST00000324856 TSHZ2Q9NRE2 1034 aa22.97■■□□□ 1.27
ARID1A-201ENST00000324856 KIF3AQ9Y496 699 aa22.96■■□□□ 1.27
ARID1A-201ENST00000324856 ATP6V1DQ9Y5K8 247 aa22.96■■□□□ 1.27
ARID1A-201ENST00000324856 ST18O60284 1047 aa22.95■■□□□ 1.26
ARID1A-201ENST00000324856 ZBTB7CA1YPR0 619 aa22.95■■□□□ 1.26
ARID1A-201ENST00000324856 CLSTN1O94985 981 aa22.95■■□□□ 1.26
ARID1A-201ENST00000324856 RCAN3Q9UKA8 241 aa22.94■■□□□ 1.26
ARID1A-201ENST00000324856 NEUROD2Q15784 382 aa22.94■■□□□ 1.26
ARID1A-201ENST00000324856 CWC15Q9P013 229 aaKnown RBP22.94■■□□□ 1.26
ARID1A-201ENST00000324856 TSR1Q2NL82 804 aaKnown RBP22.92■■□□□ 1.26
ARID1A-201ENST00000324856 CCDC66A2RUB6 948 aa22.91■■□□□ 1.26
ARID1A-201ENST00000324856 GPATCH3Q96I76 525 aa22.91■■□□□ 1.26
ARID1A-201ENST00000324856 TAOK2Q9UL54 1235 aa22.91■■□□□ 1.26
ARID1A-201ENST00000324856 RRP12Q5JTH9 1297 aaKnown RBP22.89■■□□□ 1.26
ARID1A-201ENST00000324856 GOLGA6L19H0YKK7 550 aa22.89■■□□□ 1.25
ARID1A-201ENST00000324856 NPM1P06748 294 aaKnown RBP eCLIP22.89■■□□□ 1.25
ARID1A-201ENST00000324856 KTN1Q86UP2 1357 aaKnown RBP22.89■■□□□ 1.25
ARID1A-201ENST00000324856 PHLDB1Q86UU1 1377 aa22.89■■□□□ 1.25
ARID1A-201ENST00000324856 FANCIQ9NVI1 1328 aa22.88■■□□□ 1.25
ARID1A-201ENST00000324856 CHMP4AQ9BY43 222 aa22.88■■□□□ 1.25
ARID1A-201ENST00000324856 TPM1P09493 284 aa22.87■■□□□ 1.25
ARID1A-201ENST00000324856 CEP89Q96ST8 783 aa22.87■■□□□ 1.25
ARID1A-201ENST00000324856 C14orf37Q86TY3 774 aa22.87■■□□□ 1.25
ARID1A-201ENST00000324856 RRP7BPQ9NSQ0 103 aa22.86■■□□□ 1.25
ARID1A-201ENST00000324856 A0A0G2JS52 829 aa22.86■■□□□ 1.25
ARID1A-201ENST00000324856 CHMP4CQ96CF2 233 aa22.86■■□□□ 1.25
ARID1A-201ENST00000324856 CEP164Q9UPV0 1460 aa22.86■■□□□ 1.25
ARID1A-201ENST00000324856 PKNOX2Q96KN3 472 aa22.85■■□□□ 1.25
ARID1A-201ENST00000324856 PPP1R15AO75807 674 aaPredicted RBP22.85■■□□□ 1.25
ARID1A-201ENST00000324856 MYO15BQ96JP2 1530 aa22.83■■□□□ 1.25
ARID1A-201ENST00000324856 FAM43AQ8N2R8 423 aa22.83■■□□□ 1.25
ARID1A-201ENST00000324856 ARGLU1Q9NWB6 273 aaPredicted RBP22.83■■□□□ 1.25
ARID1A-201ENST00000324856 TMF1P82094 1093 aa22.83■■□□□ 1.24
ARID1A-201ENST00000324856 ACBD3Q9H3P7 528 aa22.83■■□□□ 1.24
ARID1A-201ENST00000324856 HMMRO75330 724 aa22.82■■□□□ 1.24
ARID1A-201ENST00000324856 FAM13BQ9NYF5 915 aa22.81■■□□□ 1.24
ARID1A-201ENST00000324856 HDAC5Q9UQL6 1122 aa22.8■■□□□ 1.24
ARID1A-201ENST00000324856 RALBP1Q15311 655 aa22.79■■□□□ 1.24
ARID1A-201ENST00000324856 CC2D1BQ5T0F9 858 aaKnown RBP22.78■■□□□ 1.24
ARID1A-201ENST00000324856 CDR1P51861 262 aa22.77■■□□□ 1.24
ARID1A-201ENST00000324856 AK7Q96M32 723 aa22.77■■□□□ 1.24
ARID1A-201ENST00000324856 ABCC9O60706 1549 aa22.76■■□□□ 1.23
ARID1A-201ENST00000324856 FHAD1B1AJZ9 1412 aa22.76■■□□□ 1.23
ARID1A-201ENST00000324856 TAF3Q5VWG9 929 aa22.76■■□□□ 1.23
ARID1A-201ENST00000324856 U2SURPO15042 1029 aaKnown RBP22.75■■□□□ 1.23
ARID1A-201ENST00000324856 HSP90B2PQ58FF3 399 aa22.75■■□□□ 1.23
ARID1A-201ENST00000324856 RDXP35241 583 aaKnown RBP22.75■■□□□ 1.23
ARID1A-201ENST00000324856 DDX49Q9Y6V7 483 aaKnown RBP22.75■■□□□ 1.23
ARID1A-201ENST00000324856 NPHP1O15259 732 aa22.74■■□□□ 1.23
ARID1A-201ENST00000324856 DIAPH3Q9NSV4 1193 aa22.74■■□□□ 1.23
ARID1A-201ENST00000324856 CCNB3Q8WWL7 1395 aa22.74■■□□□ 1.23
ARID1A-201ENST00000324856 TPM2P07951 284 aa22.74■■□□□ 1.23
ARID1A-201ENST00000324856 CCDC191Q8NCU4 936 aa22.74■■□□□ 1.23
ARID1A-201ENST00000324856 IPO7O95373 1038 aaKnown RBP22.74■■□□□ 1.23
ARID1A-201ENST00000324856 CCAR2Q8N163 923 aaKnown RBP22.74■■□□□ 1.23
ARID1A-201ENST00000324856 PABPN1Q86U42 306 aaKnown RBP eCLIP22.74■■□□□ 1.23
ARID1A-201ENST00000324856 MFAP1P55081 439 aaKnown RBP22.74■■□□□ 1.23
ARID1A-201ENST00000324856 BECN2A8MW95 431 aa22.73■■□□□ 1.23
ARID1A-201ENST00000324856 PDE3BQ13370 1112 aa22.72■■□□□ 1.23
ARID1A-201ENST00000324856 DCTN1Q14203 1278 aa22.72■■□□□ 1.23
ARID1A-201ENST00000324856 RGL3Q3MIN7 710 aa22.72■■□□□ 1.23
ARID1A-201ENST00000324856 ITPRIPQ8IWB1 547 aa22.71■■□□□ 1.23
ARID1A-201ENST00000324856 RUFY1Q96T51 708 aa22.71■■□□□ 1.23
ARID1A-201ENST00000324856 CENPQQ7L2Z9 268 aaPredicted RBP22.7■■□□□ 1.22
ARID1A-201ENST00000324856 FAM161AQ3B820 660 aa22.7■■□□□ 1.22
ARID1A-201ENST00000324856 TNIKQ9UKE5 1360 aa22.69■■□□□ 1.22
ARID1A-201ENST00000324856 HSP90B1P14625 803 aaKnown RBP22.69■■□□□ 1.22
ARID1A-201ENST00000324856 SENP3-EIF4A1A0A087X0R7 540 aa22.68■■□□□ 1.22
ARID1A-201ENST00000324856 NCBP3Q53F19 620 aaKnown RBP22.67■■□□□ 1.22
ARID1A-201ENST00000324856 PODXL2Q9NZ53 605 aa22.67■■□□□ 1.22
ARID1A-201ENST00000324856 TPD52L1Q16890 204 aaPredicted RBP22.66■■□□□ 1.22
ARID1A-201ENST00000324856 RASSF8Q8NHQ8 419 aa22.65■■□□□ 1.22
ARID1A-201ENST00000324856 RTF1Q92541 710 aaKnown RBP22.65■■□□□ 1.22
ARID1A-201ENST00000324856 SF3A1Q15459 793 aaKnown RBP22.65■■□□□ 1.22
ARID1A-201ENST00000324856 ROCK2O75116 1388 aaKnown RBP22.65■■□□□ 1.22
ARID1A-201ENST00000324856 HMGN5P82970 282 aaKnown RBP22.64■■□□□ 1.22
ARID1A-201ENST00000324856 HOOK1Q9UJC3 728 aaKnown RBP22.64■■□□□ 1.22
ARID1A-201ENST00000324856 TRIM6-TRIM34B2RNG4 842 aa22.64■■□□□ 1.21
ARID1A-201ENST00000324856 ANKRD20A12PQ8NF67 263 aa22.64■■□□□ 1.21
ARID1A-201ENST00000324856 H0YHG0 523 aa22.63■■□□□ 1.21
ARID1A-201ENST00000324856 PRM3Q9NNZ6 103 aa22.62■■□□□ 1.21
ARID1A-201ENST00000324856 POGKQ9P215 609 aa22.62■■□□□ 1.21
ARID1A-201ENST00000324856 HOMER1Q86YM7 354 aa22.62■■□□□ 1.21
ARID1A-201ENST00000324856 ZNF592Q92610 1267 aa22.62■■□□□ 1.21
ARID1A-201ENST00000324856 PATL2C9JE40 543 aaKnown RBP22.61■■□□□ 1.21
ARID1A-201ENST00000324856 H3BQV1 296 aa22.6■■□□□ 1.21
ARID1A-201ENST00000324856 IFFO2Q5TF58 517 aa22.6■■□□□ 1.21
ARID1A-201ENST00000324856 SETD5Q9C0A6 1442 aa22.59■■□□□ 1.21
ARID1A-201ENST00000324856 EIF3AQ14152 1382 aaKnown RBP22.59■■□□□ 1.21
ARID1A-201ENST00000324856 MORC1Q86VD1 984 aa22.59■■□□□ 1.21
ARID1A-201ENST00000324856 RRP9O43818 475 aaKnown RBP22.58■■□□□ 1.21
ARID1A-201ENST00000324856 ERCC4Q92889 916 aaPredicted RBP22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms