RNA–Protein interactions for RNA: ENST00000310421.4

VCPIP1-201, Transcript of valosin containing protein interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPIP1, Length 9,942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1-201ENST00000310421 PPP4R2Q9NY27 417 aa14.4□□□□□ -0.1
VCPIP1-201ENST00000310421 FRAT1Q92837 279 aaPredicted RBP14.4□□□□□ -0.1
VCPIP1-201ENST00000310421 NEUROD2Q15784 382 aa14.4□□□□□ -0.1
VCPIP1-201ENST00000310421 HIRIP3Q9BW71 556 aaPredicted RBP14.4□□□□□ -0.1
VCPIP1-201ENST00000310421 KIAA2012Q0VF49 1180 aa14.39□□□□□ -0.11
VCPIP1-201ENST00000310421 MORC1Q86VD1 984 aa14.39□□□□□ -0.11
VCPIP1-201ENST00000310421 GPATCH3Q96I76 525 aa14.39□□□□□ -0.11
VCPIP1-201ENST00000310421 ROCK2O75116 1388 aaKnown RBP14.39□□□□□ -0.11
VCPIP1-201ENST00000310421 NAP1L2Q9ULW6 460 aaPredicted RBP14.39□□□□□ -0.11
VCPIP1-201ENST00000310421 KIAA1211Q6ZU35 1233 aa14.38□□□□□ -0.11
VCPIP1-201ENST00000310421 TULP1O00294 542 aaPredicted RBP14.38□□□□□ -0.11
VCPIP1-201ENST00000310421 ANKRD30AQ9BXX3 1397 aa14.38□□□□□ -0.11
VCPIP1-201ENST00000310421 SPAG9O60271 1321 aaKnown RBP14.38□□□□□ -0.11
VCPIP1-201ENST00000310421 WIZO95785 1651 aa14.37□□□□□ -0.11
VCPIP1-201ENST00000310421 TRHP20396 242 aaPredicted RBP14.37□□□□□ -0.11
VCPIP1-201ENST00000310421 DCAF11Q8TEB1 546 aa14.37□□□□□ -0.11
VCPIP1-201ENST00000310421 CC2D1BQ5T0F9 858 aaKnown RBP14.36□□□□□ -0.11
VCPIP1-201ENST00000310421 HTATSF1O43719 755 aaKnown RBP14.36□□□□□ -0.11
VCPIP1-201ENST00000310421 CLSTN1O94985 981 aa14.36□□□□□ -0.11
VCPIP1-201ENST00000310421 CCDC34Q96HJ3 373 aa14.36□□□□□ -0.11
VCPIP1-201ENST00000310421 UACAQ9BZF9 1416 aa14.36□□□□□ -0.11
VCPIP1-201ENST00000310421 SMARCA4P51532 1647 aa14.34□□□□□ -0.11
VCPIP1-201ENST00000310421 MYO15BQ96JP2 1530 aa14.34□□□□□ -0.11
VCPIP1-201ENST00000310421 ABCC8Q09428 1581 aa14.34□□□□□ -0.11
VCPIP1-201ENST00000310421 RGS3P49796 1198 aa14.34□□□□□ -0.11
VCPIP1-201ENST00000310421 PHLDB1Q86UU1 1377 aa14.31□□□□□ -0.12
VCPIP1-201ENST00000310421 RALBP1Q15311 655 aa14.31□□□□□ -0.12
VCPIP1-201ENST00000310421 SUPT16HQ9Y5B9 1047 aaKnown RBP14.3□□□□□ -0.12
VCPIP1-201ENST00000310421 SYAP1Q96A49 352 aaPredicted RBP14.3□□□□□ -0.12
VCPIP1-201ENST00000310421 TERF2IPQ9NYB0 399 aa14.3□□□□□ -0.12
VCPIP1-201ENST00000310421 NOP58Q9Y2X3 529 aaKnown RBP14.3□□□□□ -0.12
VCPIP1-201ENST00000310421 KAT6BQ8WYB5 2073 aa14.3□□□□□ -0.12
VCPIP1-201ENST00000310421 SOGA1O94964 1423 aa14.29□□□□□ -0.12
VCPIP1-201ENST00000310421 CCDC88BA6NC98 1476 aa14.29□□□□□ -0.12
VCPIP1-201ENST00000310421 CCER2I3L3R5 266 aa14.29□□□□□ -0.12
VCPIP1-201ENST00000310421 RSPH4AQ5TD94 716 aa14.29□□□□□ -0.12
VCPIP1-201ENST00000310421 EID1Q9Y6B2 187 aa14.29□□□□□ -0.12
VCPIP1-201ENST00000310421 ISY1Q9ULR0 285 aaKnown RBP14.29□□□□□ -0.12
VCPIP1-201ENST00000310421 LMOD3Q0VAK6 560 aa14.28□□□□□ -0.12
VCPIP1-201ENST00000310421 MSNP26038 577 aaKnown RBP14.28□□□□□ -0.12
VCPIP1-201ENST00000310421 EFCAB2Q5VUJ9 269 aa14.27□□□□□ -0.12
VCPIP1-201ENST00000310421 PLCB2Q00722 1185 aa14.27□□□□□ -0.13
VCPIP1-201ENST00000310421 DRC7Q8IY82 874 aa14.27□□□□□ -0.13
VCPIP1-201ENST00000310421 TPRNQ4KMQ1 711 aa14.27□□□□□ -0.13
VCPIP1-201ENST00000310421 GBP4Q96PP9 640 aa14.26□□□□□ -0.13
VCPIP1-201ENST00000310421 HMMRO75330 724 aa14.26□□□□□ -0.13
VCPIP1-201ENST00000310421 STK31Q9BXU1 1019 aa14.26□□□□□ -0.13
VCPIP1-201ENST00000310421 MLECQ14165 292 aa14.25□□□□□ -0.13
VCPIP1-201ENST00000310421 NAP1L5Q96NT1 182 aaPredicted RBP14.24□□□□□ -0.13
VCPIP1-201ENST00000310421 CUX1P39880 1505 aa14.24□□□□□ -0.13
VCPIP1-201ENST00000310421 CSB-PGBD3P0DP91 1061 aa14.24□□□□□ -0.13
VCPIP1-201ENST00000310421 NUP155O75694 1391 aa14.24□□□□□ -0.13
VCPIP1-201ENST00000310421 TPM4P67936 248 aa14.24□□□□□ -0.13
VCPIP1-201ENST00000310421 CSPP1Q1MSJ5 1256 aa14.24□□□□□ -0.13
VCPIP1-201ENST00000310421 USP35Q9P2H5 1018 aa14.24□□□□□ -0.13
VCPIP1-201ENST00000310421 RAPGEF2Q9Y4G8 1499 aa14.24□□□□□ -0.13
VCPIP1-201ENST00000310421 PAK3O75914 559 aaPredicted RBP14.23□□□□□ -0.13
VCPIP1-201ENST00000310421 RWDD1Q9H446 243 aaPredicted RBP14.23□□□□□ -0.13
VCPIP1-201ENST00000310421 TAOK2Q9UL54 1235 aa14.22□□□□□ -0.13
VCPIP1-201ENST00000310421 NOC3LQ8WTT2 800 aaKnown RBP14.22□□□□□ -0.13
VCPIP1-201ENST00000310421 PKD2Q13563 968 aa14.21□□□□□ -0.13
VCPIP1-201ENST00000310421 MROH2BQ7Z745 1585 aa14.21□□□□□ -0.14
VCPIP1-201ENST00000310421 CECR2Q9BXF3 1484 aa14.2□□□□□ -0.14
VCPIP1-201ENST00000310421 KIF3AQ9Y496 699 aa14.2□□□□□ -0.14
VCPIP1-201ENST00000310421 GORABQ5T7V8 394 aa14.2□□□□□ -0.14
VCPIP1-201ENST00000310421 CHMP4CQ96CF2 233 aa14.2□□□□□ -0.14
VCPIP1-201ENST00000310421 GGT6Q6P531 493 aa14.19□□□□□ -0.14
VCPIP1-201ENST00000310421 SOX12O15370 315 aa14.19□□□□□ -0.14
VCPIP1-201ENST00000310421 PHF14O94880 888 aa14.19□□□□□ -0.14
VCPIP1-201ENST00000310421 ITPRIPQ8IWB1 547 aa14.18□□□□□ -0.14
VCPIP1-201ENST00000310421 PMFBP1Q8TBY8 1022 aa14.18□□□□□ -0.14
VCPIP1-201ENST00000310421 U2AF1L5P0DN76 240 aaPredicted RBP14.17□□□□□ -0.14
VCPIP1-201ENST00000310421 U2AF1Q01081 240 aaKnown RBP eCLIP14.17□□□□□ -0.14
VCPIP1-201ENST00000310421 SAFB2Q14151 953 aaKnown RBP eCLIP14.17□□□□□ -0.14
VCPIP1-201ENST00000310421 CCDC144AA2RUR9 1427 aa14.17□□□□□ -0.14
VCPIP1-201ENST00000310421 TAF7LQ5H9L4 462 aa14.17□□□□□ -0.14
VCPIP1-201ENST00000310421 STK26Q9P289 416 aa14.17□□□□□ -0.14
VCPIP1-201ENST00000310421 SIN3AQ96ST3 1273 aa14.15□□□□□ -0.14
VCPIP1-201ENST00000310421 G3V3G9 751 aa14.14□□□□□ -0.15
VCPIP1-201ENST00000310421 DCAF8Q5TAQ9 597 aa14.14□□□□□ -0.15
VCPIP1-201ENST00000310421 LRRFIP1Q32MZ4 808 aaKnown RBP14.14□□□□□ -0.15
VCPIP1-201ENST00000310421 KIF15Q9NS87 1388 aa14.13□□□□□ -0.15
VCPIP1-201ENST00000310421 WASHC2CQ9Y4E1 1318 aa14.13□□□□□ -0.15
VCPIP1-201ENST00000310421 RAB3GAP2Q9H2M9 1393 aa14.12□□□□□ -0.15
VCPIP1-201ENST00000310421 CHMP3Q9Y3E7 222 aa14.12□□□□□ -0.15
VCPIP1-201ENST00000310421 RCAN3Q9UKA8 241 aa14.12□□□□□ -0.15
VCPIP1-201ENST00000310421 ZNF330Q9Y3S2 320 aaPredicted RBP14.12□□□□□ -0.15
VCPIP1-201ENST00000310421 HSP90B1P14625 803 aaKnown RBP14.11□□□□□ -0.15
VCPIP1-201ENST00000310421 CGNL1Q0VF96 1302 aa14.1□□□□□ -0.15
VCPIP1-201ENST00000310421 TCERG1O14776 1098 aaKnown RBP14.09□□□□□ -0.15
VCPIP1-201ENST00000310421 PDE3BQ13370 1112 aa14.09□□□□□ -0.15
VCPIP1-201ENST00000310421 NGDNQ8NEJ9 315 aaKnown RBP14.09□□□□□ -0.15
VCPIP1-201ENST00000310421 HSPA5P11021 654 aaKnown RBP14.09□□□□□ -0.15
VCPIP1-201ENST00000310421 RASSF8Q8NHQ8 419 aa14.09□□□□□ -0.15
VCPIP1-201ENST00000310421 MPHOSPH9Q99550 1183 aa14.08□□□□□ -0.15
VCPIP1-201ENST00000310421 KIF16BQ96L93 1317 aa14.08□□□□□ -0.15
VCPIP1-201ENST00000310421 SMC4Q9NTJ3 1288 aa14.08□□□□□ -0.15
VCPIP1-201ENST00000310421 GOLGA6L1Q8N7Z2 621 aa14.08□□□□□ -0.16
VCPIP1-201ENST00000310421 ST18O60284 1047 aa14.08□□□□□ -0.16
VCPIP1-201ENST00000310421 CCDC9Q9Y3X0 531 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms