RNA–Protein interactions for RNA: ENST00000309996.6

SPTBN2-201, Transcript of spectrin beta, non-erythrocytic 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN2, Length 7,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2-201ENST00000309996 CWC22Q9HCG8 908 aaKnown RBP16.32■□□□□ 0.2
SPTBN2-201ENST00000309996 RASSF8Q8NHQ8 419 aa16.32■□□□□ 0.2
SPTBN2-201ENST00000309996 CHMP3Q9Y3E7 222 aa16.32■□□□□ 0.2
SPTBN2-201ENST00000309996 GORABQ5T7V8 394 aa16.32■□□□□ 0.2
SPTBN2-201ENST00000309996 TCEAL9Q9UHQ7 104 aa16.32■□□□□ 0.2
SPTBN2-201ENST00000309996 RSF1Q96T23 1441 aaPredicted RBP16.31■□□□□ 0.2
SPTBN2-201ENST00000309996 CREBRFQ8IUR6 639 aa16.31■□□□□ 0.2
SPTBN2-201ENST00000309996 SPRYD3Q8NCJ5 442 aa16.3■□□□□ 0.2
SPTBN2-201ENST00000309996 PPP4R2Q9NY27 417 aa16.3■□□□□ 0.2
SPTBN2-201ENST00000309996 KIAA1211Q6ZU35 1233 aa16.3■□□□□ 0.2
SPTBN2-201ENST00000309996 MSH5O43196 834 aa16.3■□□□□ 0.2
SPTBN2-201ENST00000309996 MARCH6O60337 910 aa16.29■□□□□ 0.2
SPTBN2-201ENST00000309996 CFAP44Q96MT7 982 aa16.29■□□□□ 0.2
SPTBN2-201ENST00000309996 PLEKHD1A6NEE1 506 aa16.29■□□□□ 0.2
SPTBN2-201ENST00000309996 FRAT2O75474 233 aaPredicted RBP16.29■□□□□ 0.2
SPTBN2-201ENST00000309996 CC2D1BQ5T0F9 858 aaKnown RBP16.28■□□□□ 0.2
SPTBN2-201ENST00000309996 CTDP1Q9Y5B0 961 aaPredicted RBP16.27■□□□□ 0.19
SPTBN2-201ENST00000309996 GTF2E1P29083 439 aaPredicted RBP16.26■□□□□ 0.19
SPTBN2-201ENST00000309996 HSP90B1P14625 803 aaKnown RBP16.25■□□□□ 0.19
SPTBN2-201ENST00000309996 GOLGA6L1Q8N7Z2 621 aa16.24■□□□□ 0.19
SPTBN2-201ENST00000309996 TPM4P67936 248 aa16.24■□□□□ 0.19
SPTBN2-201ENST00000309996 TNNT3P45378 269 aaPredicted RBP16.23■□□□□ 0.19
SPTBN2-201ENST00000309996 KLHL34Q8N239 644 aa16.23■□□□□ 0.19
SPTBN2-201ENST00000309996 MEX3CQ5U5Q3 659 aaKnown RBP16.23■□□□□ 0.19
SPTBN2-201ENST00000309996 CCDC34Q96HJ3 373 aa16.23■□□□□ 0.19
SPTBN2-201ENST00000309996 TRIM34Q9BYJ4 488 aa16.23■□□□□ 0.19
SPTBN2-201ENST00000309996 SRPK2P78362 688 aaKnown RBP16.23■□□□□ 0.19
SPTBN2-201ENST00000309996 PTMSP20962 102 aa16.22■□□□□ 0.19
SPTBN2-201ENST00000309996 CLIP1P30622 1438 aa16.21■□□□□ 0.19
SPTBN2-201ENST00000309996 ZCCHC6Q5VYS8 1495 aaKnown RBP16.2■□□□□ 0.18
SPTBN2-201ENST00000309996 HTATSF1O43719 755 aaKnown RBP16.2■□□□□ 0.18
SPTBN2-201ENST00000309996 ARID3AQ99856 593 aa16.2■□□□□ 0.18
SPTBN2-201ENST00000309996 B4GALNT3Q6L9W6 998 aa16.19■□□□□ 0.18
SPTBN2-201ENST00000309996 CFDP1Q9UEE9 299 aaPredicted RBP16.19■□□□□ 0.18
SPTBN2-201ENST00000309996 APBB1O00213 710 aa16.18■□□□□ 0.18
SPTBN2-201ENST00000309996 GBP4Q96PP9 640 aa16.18■□□□□ 0.18
SPTBN2-201ENST00000309996 ERCC6Q03468 1493 aa16.17■□□□□ 0.18
SPTBN2-201ENST00000309996 RAD21O60216 631 aa16.17■□□□□ 0.18
SPTBN2-201ENST00000309996 GPATCH3Q96I76 525 aa16.17■□□□□ 0.18
SPTBN2-201ENST00000309996 SYAP1Q96A49 352 aaPredicted RBP16.17■□□□□ 0.18
SPTBN2-201ENST00000309996 PES1O00541 588 aaKnown RBP16.15■□□□□ 0.18
SPTBN2-201ENST00000309996 SAFB2Q14151 953 aaKnown RBP eCLIP16.15■□□□□ 0.18
SPTBN2-201ENST00000309996 USP35Q9P2H5 1018 aa16.15■□□□□ 0.18
SPTBN2-201ENST00000309996 TMF1P82094 1093 aa16.13■□□□□ 0.17
SPTBN2-201ENST00000309996 KANK1Q14678 1352 aa16.13■□□□□ 0.17
SPTBN2-201ENST00000309996 TOMM22Q9NS69 142 aa16.13■□□□□ 0.17
SPTBN2-201ENST00000309996 DEKP35659 375 aaKnown RBP16.12■□□□□ 0.17
SPTBN2-201ENST00000309996 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.12■□□□□ 0.173e-6■■■■■ 77.5
SPTBN2-201ENST00000309996 GZF1Q9H116 711 aaPredicted RBP16.11■□□□□ 0.17
SPTBN2-201ENST00000309996 IPO8O15397 1037 aaKnown RBP16.1■□□□□ 0.17
SPTBN2-201ENST00000309996 MORC1Q86VD1 984 aa16.1■□□□□ 0.17
SPTBN2-201ENST00000309996 STK26Q9P289 416 aa16.09■□□□□ 0.17
SPTBN2-201ENST00000309996 TPD52L1Q16890 204 aaPredicted RBP16.09■□□□□ 0.17
SPTBN2-201ENST00000309996 FBXW7Q969H0 707 aa16.08■□□□□ 0.17
SPTBN2-201ENST00000309996 EVA1CP58658 441 aa16.08■□□□□ 0.16
SPTBN2-201ENST00000309996 TPM3P06753 285 aa16.08■□□□□ 0.16
SPTBN2-201ENST00000309996 PATL2C9JE40 543 aaKnown RBP16.07■□□□□ 0.16
SPTBN2-201ENST00000309996 NOL10Q9BSC4 688 aaKnown RBP16.07■□□□□ 0.16
SPTBN2-201ENST00000309996 CSPP1Q1MSJ5 1256 aa16.07■□□□□ 0.16
SPTBN2-201ENST00000309996 TSR1Q2NL82 804 aaKnown RBP16.06■□□□□ 0.16
SPTBN2-201ENST00000309996 AMOTL1Q8IY63 956 aa16.05■□□□□ 0.16
SPTBN2-201ENST00000309996 SETQ01105 290 aaPredicted RBP16.04■□□□□ 0.16
SPTBN2-201ENST00000309996 CALD1Q05682 793 aaKnown RBP16.04■□□□□ 0.16
SPTBN2-201ENST00000309996 GOLGA3Q08378 1498 aa16.04■□□□□ 0.16
SPTBN2-201ENST00000309996 SPAG9O60271 1321 aaKnown RBP16.04■□□□□ 0.16
SPTBN2-201ENST00000309996 TRIM6-TRIM34B2RNG4 842 aa16.04■□□□□ 0.16
SPTBN2-201ENST00000309996 TPM2P07951 284 aa16.04■□□□□ 0.16
SPTBN2-201ENST00000309996 ITPRIPQ8IWB1 547 aa16.03■□□□□ 0.16
SPTBN2-201ENST00000309996 DCAF11Q8TEB1 546 aa16.03■□□□□ 0.16
SPTBN2-201ENST00000309996 CCDC180Q9P1Z9 1646 aa16.03■□□□□ 0.16
SPTBN2-201ENST00000309996 HDGFL2Q7Z4V5 671 aaPredicted RBP16.03■□□□□ 0.16
SPTBN2-201ENST00000309996 CCDC43Q96MW1 224 aaKnown RBP16.02■□□□□ 0.16
SPTBN2-201ENST00000309996 PAF1Q8N7H5 531 aa16.02■□□□□ 0.15
SPTBN2-201ENST00000309996 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.01■□□□□ 0.15
SPTBN2-201ENST00000309996 KAT6BQ8WYB5 2073 aa16.01■□□□□ 0.15
SPTBN2-201ENST00000309996 SLKQ9H2G2 1235 aaPredicted RBP16■□□□□ 0.15
SPTBN2-201ENST00000309996 PHF14O94880 888 aa16■□□□□ 0.15
SPTBN2-201ENST00000309996 AKAP17AQ02040 695 aaKnown RBP16■□□□□ 0.15
SPTBN2-201ENST00000309996 SAMD1Q6SPF0 538 aaPredicted RBP16■□□□□ 0.15
SPTBN2-201ENST00000309996 RWDD1Q9H446 243 aaPredicted RBP15.99■□□□□ 0.15
SPTBN2-201ENST00000309996 CHMP4AQ9BY43 222 aa15.99■□□□□ 0.15
SPTBN2-201ENST00000309996 MYO15BQ96JP2 1530 aa15.98■□□□□ 0.15
SPTBN2-201ENST00000309996 CCAR1Q8IX12 1150 aaKnown RBP15.98■□□□□ 0.15
SPTBN2-201ENST00000309996 GOLGA6L3A6NEY3 463 aa15.98■□□□□ 0.15
SPTBN2-201ENST00000309996 RRP12Q5JTH9 1297 aaKnown RBP15.97■□□□□ 0.15
SPTBN2-201ENST00000309996 R3HCC1Q9Y3T6 440 aaKnown RBP15.97■□□□□ 0.15
SPTBN2-201ENST00000309996 SF3A1Q15459 793 aaKnown RBP15.97■□□□□ 0.15
SPTBN2-201ENST00000309996 ODF2Q5BJF6 829 aa15.96■□□□□ 0.15
SPTBN2-201ENST00000309996 CEP162Q5TB80 1403 aa15.96■□□□□ 0.15
SPTBN2-201ENST00000309996 STK31Q9BXU1 1019 aa15.96■□□□□ 0.15
SPTBN2-201ENST00000309996 WWC2Q6AWC2 1192 aa15.96■□□□□ 0.14
SPTBN2-201ENST00000309996 KTN1Q86UP2 1357 aaKnown RBP15.95■□□□□ 0.14
SPTBN2-201ENST00000309996 SIN3AQ96ST3 1273 aa15.95■□□□□ 0.14
SPTBN2-201ENST00000309996 EID1Q9Y6B2 187 aa15.95■□□□□ 0.14
SPTBN2-201ENST00000309996 VPS37DQ86XT2 251 aa15.95■□□□□ 0.14
SPTBN2-201ENST00000309996 HDAC5Q9UQL6 1122 aa15.95■□□□□ 0.14
SPTBN2-201ENST00000309996 MFAP1P55081 439 aaKnown RBP15.94■□□□□ 0.14
SPTBN2-201ENST00000309996 CALRP27797 417 aaKnown RBP15.94■□□□□ 0.14
SPTBN2-201ENST00000309996 PMFBP1Q8TBY8 1022 aa15.94■□□□□ 0.14
SPTBN2-201ENST00000309996 VSIG10Q8N0Z9 540 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms