RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 SPDYE16A6NNV3 312 aaPredicted RBP1.98□□□□□ -2.09
CEP290-201ENST00000309041 IGHA2P01877 340 aa1.98□□□□□ -2.09
CEP290-201ENST00000309041 FBLN2P98095 1184 aa1.98□□□□□ -2.09
CEP290-201ENST00000309041 RINLQ6ZS11 566 aa1.98□□□□□ -2.09
CEP290-201ENST00000309041 BRINP2Q9C0B6 783 aa1.98□□□□□ -2.09
CEP290-201ENST00000309041 GJC2Q5T442 439 aaPredicted RBP1.98□□□□□ -2.09
CEP290-201ENST00000309041 PBXIP1Q96AQ6 731 aa1.98□□□□□ -2.09
CEP290-201ENST00000309041 RELTQ969Z4 430 aa1.97□□□□□ -2.09
CEP290-201ENST00000309041 CDK11AQ9UQ88 783 aaPredicted RBP1.97□□□□□ -2.09
CEP290-201ENST00000309041 FRMD6Q96NE9 622 aa1.97□□□□□ -2.09
CEP290-201ENST00000309041 SCARA3Q6AZY7 606 aa1.97□□□□□ -2.09
CEP290-201ENST00000309041 DCAF8L2P0C7V8 631 aa1.97□□□□□ -2.09
CEP290-201ENST00000309041 TMCO4Q5TGY1 634 aa1.97□□□□□ -2.09
CEP290-201ENST00000309041 KDM4AO75164 1064 aa1.97□□□□□ -2.09
CEP290-201ENST00000309041 C7P10643 843 aa1.97□□□□□ -2.09
CEP290-201ENST00000309041 CCSAPQ6IQ19 270 aaPredicted RBP1.97□□□□□ -2.09
CEP290-201ENST00000309041 WWC1Q8IX03 1113 aa1.97□□□□□ -2.09
CEP290-201ENST00000309041 HMGXB3Q12766 1538 aa1.97□□□□□ -2.09
CEP290-201ENST00000309041 ZEB1P37275 1124 aaPredicted RBP1.97□□□□□ -2.09
CEP290-201ENST00000309041 TUSC1Q2TAM9 212 aa1.97□□□□□ -2.09
CEP290-201ENST00000309041 RGS17Q9UGC6 210 aaPredicted RBP1.97□□□□□ -2.09
CEP290-201ENST00000309041 NOP58Q9Y2X3 529 aaKnown RBP1.97□□□□□ -2.09
CEP290-201ENST00000309041 CC2D1BQ5T0F9 858 aaKnown RBP1.96□□□□□ -2.09
CEP290-201ENST00000309041 DIEXFQ68CQ4 756 aaKnown RBP1.96□□□□□ -2.1
CEP290-201ENST00000309041 SMARCA2P51531 1590 aa1.96□□□□□ -2.1
CEP290-201ENST00000309041 CC2D2BQ6DHV5 1058 aa1.96□□□□□ -2.1
CEP290-201ENST00000309041 SNRNP27Q8WVK2 155 aaKnown RBP1.96□□□□□ -2.1
CEP290-201ENST00000309041 OLFML2AQ68BL7 652 aa1.96□□□□□ -2.1
CEP290-201ENST00000309041 ZBTB9Q96C00 473 aa1.96□□□□□ -2.1
CEP290-201ENST00000309041 SPTY2D1Q68D10 685 aaPredicted RBP1.96□□□□□ -2.1
CEP290-201ENST00000309041 IFNLR1Q8IU57 520 aaPredicted RBP1.96□□□□□ -2.1
CEP290-201ENST00000309041 DCAF11Q8TEB1 546 aa1.96□□□□□ -2.1
CEP290-201ENST00000309041 GEMIN8Q9NWZ8 242 aaKnown RBP1.96□□□□□ -2.1
CEP290-201ENST00000309041 NACADO15069 1562 aa1.95□□□□□ -2.1
CEP290-201ENST00000309041 COL17A1Q9UMD9 1497 aaPredicted RBP1.95□□□□□ -2.1
CEP290-201ENST00000309041 SPDYE2BA6NHP3 402 aa1.95□□□□□ -2.1
CEP290-201ENST00000309041 SPDYE6P0CI01 402 aa1.95□□□□□ -2.1
CEP290-201ENST00000309041 MFSD10Q14728 455 aa1.95□□□□□ -2.1
CEP290-201ENST00000309041 SPDYE2Q495Y8 402 aa1.95□□□□□ -2.1
CEP290-201ENST00000309041 CCDC34Q96HJ3 373 aa1.95□□□□□ -2.1
CEP290-201ENST00000309041 PRDM2Q13029 1718 aa1.95□□□□□ -2.1
CEP290-201ENST00000309041 TMEM63BQ5T3F8 832 aa1.95□□□□□ -2.1
CEP290-201ENST00000309041 MSL1Q68DK7 614 aa1.95□□□□□ -2.1
CEP290-201ENST00000309041 LSM14AQ8ND56 463 aaKnown RBP1.95□□□□□ -2.1
CEP290-201ENST00000309041 BBXQ8WY36 941 aaPredicted RBP1.95□□□□□ -2.1
CEP290-201ENST00000309041 CACNB1Q02641 598 aaPredicted RBP1.95□□□□□ -2.1
CEP290-201ENST00000309041 KRT23Q9C075 422 aa1.95□□□□□ -2.1
CEP290-201ENST00000309041 TMEM132AQ24JP5 1023 aa1.95□□□□□ -2.1
CEP290-201ENST00000309041 EFCC1Q9HA90 598 aa1.94□□□□□ -2.1
CEP290-201ENST00000309041 STARD8Q92502 1023 aa1.94□□□□□ -2.1
CEP290-201ENST00000309041 ZFYVE1Q9HBF4 777 aa1.94□□□□□ -2.1
CEP290-201ENST00000309041 ECM1Q16610 540 aa1.94□□□□□ -2.1
CEP290-201ENST00000309041 SOX11P35716 441 aa1.94□□□□□ -2.1
CEP290-201ENST00000309041 CUEDC1Q9NWM3 386 aaPredicted RBP1.94□□□□□ -2.1
CEP290-201ENST00000309041 DEKP35659 375 aaKnown RBP1.94□□□□□ -2.1
CEP290-201ENST00000309041 KCTD17Q8N5Z5 321 aa1.94□□□□□ -2.1
CEP290-201ENST00000309041 MSL2Q9HCI7 577 aa1.94□□□□□ -2.1
CEP290-201ENST00000309041 POTEAQ6S8J7 498 aa1.93□□□□□ -2.1
CEP290-201ENST00000309041 THOC2Q8NI27 1593 aaKnown RBP1.93□□□□□ -2.1
CEP290-201ENST00000309041 ARMC5Q96C12 935 aa1.93□□□□□ -2.1
CEP290-201ENST00000309041 ZNF219Q9P2Y4 722 aaPredicted RBP1.93□□□□□ -2.1
CEP290-201ENST00000309041 TIMELESSQ9UNS1 1208 aa1.93□□□□□ -2.1
CEP290-201ENST00000309041 HSP90AA1P07900 732 aaKnown RBP1.93□□□□□ -2.1
CEP290-201ENST00000309041 SLC4A3P48751 1232 aa1.93□□□□□ -2.1
CEP290-201ENST00000309041 RGS20O76081 388 aa1.93□□□□□ -2.1
CEP290-201ENST00000309041 TRHP20396 242 aaPredicted RBP1.93□□□□□ -2.1
CEP290-201ENST00000309041 FOSBP53539 338 aa1.92□□□□□ -2.1
CEP290-201ENST00000309041 TAF7LQ5H9L4 462 aa1.92□□□□□ -2.1
CEP290-201ENST00000309041 TRERF1Q96PN7 1200 aa1.92□□□□□ -2.1
CEP290-201ENST00000309041 C1QBPQ07021 282 aaKnown RBP1.92□□□□□ -2.1
CEP290-201ENST00000309041 FLIIQ13045 1269 aa1.92□□□□□ -2.1
CEP290-201ENST00000309041 RGL3Q3MIN7 710 aa1.92□□□□□ -2.1
CEP290-201ENST00000309041 PLCD4Q9BRC7 762 aa1.92□□□□□ -2.1
CEP290-201ENST00000309041 GNL2Q13823 731 aaKnown RBP1.92□□□□□ -2.1
CEP290-201ENST00000309041 DHX37Q8IY37 1157 aaKnown RBP1.92□□□□□ -2.1
CEP290-201ENST00000309041 ZRANB1Q9UGI0 708 aa1.92□□□□□ -2.1
CEP290-201ENST00000309041 FOXD4L6Q3SYB3 417 aaPredicted RBP1.92□□□□□ -2.1
CEP290-201ENST00000309041 FOXD4L3Q6VB84 417 aaPredicted RBP1.92□□□□□ -2.1
CEP290-201ENST00000309041 OTUD5Q96G74 571 aa1.92□□□□□ -2.1
CEP290-201ENST00000309041 RSF1Q96T23 1441 aaPredicted RBP1.92□□□□□ -2.1
CEP290-201ENST00000309041 IER5LQ5T953 404 aa1.91□□□□□ -2.1
CEP290-201ENST00000309041 FAM9BQ8IZU0 186 aa1.91□□□□□ -2.1
CEP290-201ENST00000309041 ANO8Q9HCE9 1232 aaPredicted RBP1.91□□□□□ -2.1
CEP290-201ENST00000309041 TRIM29Q14134 588 aa1.91□□□□□ -2.1
CEP290-201ENST00000309041 FBXO31Q5XUX0 539 aaPredicted RBP1.91□□□□□ -2.1
CEP290-201ENST00000309041 FAM212AQ96EL1 285 aa1.91□□□□□ -2.1
CEP290-201ENST00000309041 ARID4BQ4LE39 1312 aaPredicted RBP1.91□□□□□ -2.1
CEP290-201ENST00000309041 POTEEQ6S8J3 1075 aa1.91□□□□□ -2.1
CEP290-201ENST00000309041 TTC13Q8NBP0 860 aa1.91□□□□□ -2.1
CEP290-201ENST00000309041 SPINK5Q9NQ38 1064 aaPredicted RBP1.91□□□□□ -2.1
CEP290-201ENST00000309041 SHROOM2Q13796 1616 aa1.91□□□□□ -2.1
CEP290-201ENST00000309041 KIF3CO14782 793 aa1.91□□□□□ -2.1
CEP290-201ENST00000309041 PDGFAP04085 211 aa1.91□□□□□ -2.1
CEP290-201ENST00000309041 POLR3GLQ9BT43 218 aa1.91□□□□□ -2.1
CEP290-201ENST00000309041 LRP10Q7Z4F1 713 aa1.91□□□□□ -2.1
CEP290-201ENST00000309041 C11orf96Q7Z7L8 435 aa1.91□□□□□ -2.1
CEP290-201ENST00000309041 PIK3R5Q8WYR1 880 aa1.91□□□□□ -2.1
CEP290-201ENST00000309041 ANKRD24Q8TF21 1146 aa1.9□□□□□ -2.1
CEP290-201ENST00000309041 RNF39Q9H2S5 420 aa1.9□□□□□ -2.1
CEP290-201ENST00000309041 ZC3H4Q9UPT8 1303 aaKnown RBP1.9□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms