RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 CLASP1Q7Z460 1538 aa14.82□□□□□ -0.04
APOBEC3F-201ENST00000308521 TROQ12816 1431 aaPredicted RBP14.82□□□□□ -0.04
APOBEC3F-201ENST00000308521 OSCARQ8IYS5 282 aa14.82□□□□□ -0.04
APOBEC3F-201ENST00000308521 PTPN23Q9H3S7 1636 aa14.81□□□□□ -0.04
APOBEC3F-201ENST00000308521 UACAQ9BZF9 1416 aa14.81□□□□□ -0.04
APOBEC3F-201ENST00000308521 CFDP1Q9UEE9 299 aaPredicted RBP14.8□□□□□ -0.04
APOBEC3F-201ENST00000308521 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.8□□□□□ -0.04
APOBEC3F-201ENST00000308521 KCNH8Q96L42 1107 aa14.8□□□□□ -0.04
APOBEC3F-201ENST00000308521 KIF14Q15058 1648 aa14.79□□□□□ -0.04
APOBEC3F-201ENST00000308521 MIA2Q96PC5 1412 aa14.75□□□□□ -0.05
APOBEC3F-201ENST00000308521 GPATCH8Q9UKJ3 1502 aaKnown RBP14.74□□□□□ -0.05
APOBEC3F-201ENST00000308521 SUPT16HQ9Y5B9 1047 aaKnown RBP14.74□□□□□ -0.05
APOBEC3F-201ENST00000308521 TCOF1Q13428 1488 aaKnown RBP14.73□□□□□ -0.05
APOBEC3F-201ENST00000308521 SIN3AQ96ST3 1273 aa14.71□□□□□ -0.05
APOBEC3F-201ENST00000308521 NAIPQ13075 1403 aa14.71□□□□□ -0.05
APOBEC3F-201ENST00000308521 ABCC2Q92887 1545 aa14.7□□□□□ -0.06
APOBEC3F-201ENST00000308521 HFM1A2PYH4 1435 aa14.7□□□□□ -0.06
APOBEC3F-201ENST00000308521 HNRNPMP52272 730 aaKnown RBP eCLIP14.69□□□□□ -0.06
APOBEC3F-201ENST00000308521 ABCC5O15440 1437 aa14.68□□□□□ -0.06
APOBEC3F-201ENST00000308521 TRIM52Q96A61 297 aa14.68□□□□□ -0.06
APOBEC3F-201ENST00000308521 ABCC10Q5T3U5 1492 aa14.68□□□□□ -0.06
APOBEC3F-201ENST00000308521 DAPK1P53355 1430 aa14.67□□□□□ -0.06
APOBEC3F-201ENST00000308521 CAMSAP2Q08AD1 1489 aa14.67□□□□□ -0.06
APOBEC3F-201ENST00000308521 ADCY10Q96PN6 1610 aa14.66□□□□□ -0.06
APOBEC3F-201ENST00000308521 MAPKBP1O60336 1514 aa14.65□□□□□ -0.06
APOBEC3F-201ENST00000308521 CDC42BPAQ5VT25 1732 aa14.63□□□□□ -0.07
APOBEC3F-201ENST00000308521 KDM6BO15054 1643 aa14.63□□□□□ -0.07
APOBEC3F-201ENST00000308521 ZCCHC11Q5TAX3 1644 aaKnown RBP14.62□□□□□ -0.07
APOBEC3F-201ENST00000308521 ITSN2Q9NZM3 1697 aa14.61□□□□□ -0.07
APOBEC3F-201ENST00000308521 KDM5BQ9UGL1 1544 aa14.61□□□□□ -0.07
APOBEC3F-201ENST00000308521 DNMT1P26358 1616 aaKnown RBP14.6□□□□□ -0.07
APOBEC3F-201ENST00000308521 UHRF1BP1LA0JNW5 1464 aa14.6□□□□□ -0.07
APOBEC3F-201ENST00000308521 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.6□□□□□ -0.07
APOBEC3F-201ENST00000308521 TTC37Q6PGP7 1564 aa14.6□□□□□ -0.07
APOBEC3F-201ENST00000308521 TSPY4P0CV99 314 aa14.59□□□□□ -0.07
APOBEC3F-201ENST00000308521 TSPY10P0CW01 314 aa14.59□□□□□ -0.07
APOBEC3F-201ENST00000308521 TSHZ2Q9NRE2 1034 aa14.59□□□□□ -0.07
APOBEC3F-201ENST00000308521 AKNAQ7Z591 1439 aa14.58□□□□□ -0.08
APOBEC3F-201ENST00000308521 CYB5RLQ6IPT4 315 aa14.57□□□□□ -0.08
APOBEC3F-201ENST00000308521 ARHGAP5Q13017 1502 aa14.57□□□□□ -0.08
APOBEC3F-201ENST00000308521 CDC42BPBQ9Y5S2 1711 aa14.56□□□□□ -0.08
APOBEC3F-201ENST00000308521 NPM1P06748 294 aaKnown RBP eCLIP14.56□□□□□ -0.08
APOBEC3F-201ENST00000308521 NCOA1Q15788 1441 aa14.56□□□□□ -0.08
APOBEC3F-201ENST00000308521 ROCK1Q13464 1354 aa14.55□□□□□ -0.08
APOBEC3F-201ENST00000308521 MPHOSPH9Q99550 1183 aa14.55□□□□□ -0.08
APOBEC3F-201ENST00000308521 SAMD9LQ8IVG5 1584 aa14.53□□□□□ -0.08
APOBEC3F-201ENST00000308521 MBD5Q9P267 1494 aa14.53□□□□□ -0.08
APOBEC3F-201ENST00000308521 C9orf84Q5VXU9 1444 aa14.53□□□□□ -0.08
APOBEC3F-201ENST00000308521 GCC2Q8IWJ2 1684 aa14.52□□□□□ -0.08
APOBEC3F-201ENST00000308521 ANKRD30AQ9BXX3 1397 aa14.52□□□□□ -0.08
APOBEC3F-201ENST00000308521 SLC4A1APQ9BWU0 796 aaKnown RBP14.52□□□□□ -0.09
APOBEC3F-201ENST00000308521 TIMELESSQ9UNS1 1208 aa14.52□□□□□ -0.09
APOBEC3F-201ENST00000308521 ASXL2Q76L83 1435 aa14.52□□□□□ -0.09
APOBEC3F-201ENST00000308521 PREX2Q70Z35 1606 aa14.51□□□□□ -0.09
APOBEC3F-201ENST00000308521 EFCAB2Q5VUJ9 269 aa14.51□□□□□ -0.09
APOBEC3F-201ENST00000308521 WDR7Q9Y4E6 1490 aa14.51□□□□□ -0.09
APOBEC3F-201ENST00000308521 SYCP2Q9BX26 1530 aa14.51□□□□□ -0.09
APOBEC3F-201ENST00000308521 PLCH2O75038 1416 aa14.5□□□□□ -0.09
APOBEC3F-201ENST00000308521 DENND4BO75064 1496 aaPredicted RBP14.5□□□□□ -0.09
APOBEC3F-201ENST00000308521 AFAP1Q8N556 730 aa14.49□□□□□ -0.09
APOBEC3F-201ENST00000308521 ARHGEF12Q9NZN5 1544 aa14.48□□□□□ -0.09
APOBEC3F-201ENST00000308521 ANKRD50Q9ULJ7 1429 aa14.48□□□□□ -0.09
APOBEC3F-201ENST00000308521 MYO5CQ9NQX4 1742 aa14.48□□□□□ -0.09
APOBEC3F-201ENST00000308521 KIF15Q9NS87 1388 aa14.47□□□□□ -0.09
APOBEC3F-201ENST00000308521 CCDC141Q6ZP82 1450 aa14.47□□□□□ -0.09
APOBEC3F-201ENST00000308521 CROCC2H7BZ55 1655 aa14.46□□□□□ -0.09
APOBEC3F-201ENST00000308521 ADGRL2O95490 1459 aa14.46□□□□□ -0.1
APOBEC3F-201ENST00000308521 RSPH4AQ5TD94 716 aa14.45□□□□□ -0.1
APOBEC3F-201ENST00000308521 TONSLQ96HA7 1378 aa14.45□□□□□ -0.1
APOBEC3F-201ENST00000308521 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.45□□□□□ -0.1
APOBEC3F-201ENST00000308521 MYT1LQ9UL68 1186 aa14.45□□□□□ -0.1
APOBEC3F-201ENST00000308521 TRAPPC8Q9Y2L5 1435 aa14.44□□□□□ -0.1
APOBEC3F-201ENST00000308521 PPP1R15AO75807 674 aaPredicted RBP14.44□□□□□ -0.1
APOBEC3F-201ENST00000308521 HIRIP3Q9BW71 556 aaPredicted RBP14.44□□□□□ -0.1
APOBEC3F-201ENST00000308521 ADGBQ8N7X0 1667 aa14.44□□□□□ -0.1
APOBEC3F-201ENST00000308521 NUP155O75694 1391 aa14.43□□□□□ -0.1
APOBEC3F-201ENST00000308521 CCER2I3L3R5 266 aa14.43□□□□□ -0.1
APOBEC3F-201ENST00000308521 PKD2Q13563 968 aa14.43□□□□□ -0.1
APOBEC3F-201ENST00000308521 ARHGEF5Q12774 1597 aa14.43□□□□□ -0.1
APOBEC3F-201ENST00000308521 SHANK2Q9UPX8 1470 aa14.42□□□□□ -0.1
APOBEC3F-201ENST00000308521 KIAA1107Q9UPP5 1409 aa14.41□□□□□ -0.1
APOBEC3F-201ENST00000308521 DDX10Q13206 875 aaKnown RBP14.4□□□□□ -0.1
APOBEC3F-201ENST00000308521 FANCAO15360 1455 aa14.4□□□□□ -0.1
APOBEC3F-201ENST00000308521 PZPP20742 1482 aa14.4□□□□□ -0.1
APOBEC3F-201ENST00000308521 SPAG9O60271 1321 aaKnown RBP14.39□□□□□ -0.11
APOBEC3F-201ENST00000308521 FKBP8Q14318 412 aa14.38□□□□□ -0.11
APOBEC3F-201ENST00000308521 ANKRD30BQ9BXX2 1392 aa14.38□□□□□ -0.11
APOBEC3F-201ENST00000308521 PLEKHH2Q8IVE3 1493 aa14.38□□□□□ -0.11
APOBEC3F-201ENST00000308521 RIMBP3CA6NJZ7 1639 aa14.38□□□□□ -0.11
APOBEC3F-201ENST00000308521 RIMBP3BA6NNM3 1639 aa14.38□□□□□ -0.11
APOBEC3F-201ENST00000308521 RIMBP3Q9UFD9 1639 aa14.38□□□□□ -0.11
APOBEC3F-201ENST00000308521 L3MBTL2Q969R5 705 aa14.38□□□□□ -0.11
APOBEC3F-201ENST00000308521 SCAPERQ9BY12 1400 aa14.37□□□□□ -0.11
APOBEC3F-201ENST00000308521 ABCC1P33527 1531 aa14.37□□□□□ -0.11
APOBEC3F-201ENST00000308521 CD109Q6YHK3 1445 aa14.36□□□□□ -0.11
APOBEC3F-201ENST00000308521 ABCA9Q8IUA7 1624 aa14.36□□□□□ -0.11
APOBEC3F-201ENST00000308521 NEFLP07196 543 aa14.35□□□□□ -0.11
APOBEC3F-201ENST00000308521 ADGRL1O94910 1474 aa14.35□□□□□ -0.11
APOBEC3F-201ENST00000308521 KCNA4P22459 653 aa14.34□□□□□ -0.11
APOBEC3F-201ENST00000308521 ANP32CO43423 234 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms