RNA–Protein interactions for RNA: ENST00000308298.11

SSH3-202, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2 BASIC

Gene SSH3, Length 2,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-202ENST00000308298 ZNF644Q9H582 1327 aaPredicted RBP29.1■■■□□ 2.25
SSH3-202ENST00000308298 PLEKHD1A6NEE1 506 aa29.08■■■□□ 2.25
SSH3-202ENST00000308298 CDC42BPAQ5VT25 1732 aa29.08■■■□□ 2.25
SSH3-202ENST00000308298 CFDP1Q9UEE9 299 aaPredicted RBP29.07■■■□□ 2.24
SSH3-202ENST00000308298 CROCC2H7BZ55 1655 aa29.05■■■□□ 2.24
SSH3-202ENST00000308298 ADGBQ8N7X0 1667 aa29.05■■■□□ 2.24
SSH3-202ENST00000308298 ABCC10Q5T3U5 1492 aa29.05■■■□□ 2.24
SSH3-202ENST00000308298 MIER1Q8N108 512 aa29.03■■■□□ 2.24
SSH3-202ENST00000308298 ACIN1Q9UKV3 1341 aaKnown RBP29.02■■■□□ 2.24
SSH3-202ENST00000308298 TONSLQ96HA7 1378 aa29■■■□□ 2.23
SSH3-202ENST00000308298 DENND4BO75064 1496 aaPredicted RBP28.99■■■□□ 2.23
SSH3-202ENST00000308298 PPP1R15AO75807 674 aaPredicted RBP28.98■■■□□ 2.23
SSH3-202ENST00000308298 TRIM52Q96A61 297 aa28.98■■■□□ 2.23
SSH3-202ENST00000308298 CLASP1Q7Z460 1538 aa28.97■■■□□ 2.23
SSH3-202ENST00000308298 ERCC6L2Q5T890 1561 aa28.97■■■□□ 2.23
SSH3-202ENST00000308298 ADGRL2O95490 1459 aa28.94■■■□□ 2.22
SSH3-202ENST00000308298 ZNF777Q9ULD5 760 aaPredicted RBP28.93■■■□□ 2.22
SSH3-202ENST00000308298 ABCC2Q92887 1545 aa28.91■■■□□ 2.22
SSH3-202ENST00000308298 MPHOSPH9Q99550 1183 aa28.9■■■□□ 2.22
SSH3-202ENST00000308298 NCOA1Q15788 1441 aa28.89■■■□□ 2.22
SSH3-202ENST00000308298 CENPBP07199 599 aaPredicted RBP28.88■■■□□ 2.21
SSH3-202ENST00000308298 PREX2Q70Z35 1606 aa28.87■■■□□ 2.21
SSH3-202ENST00000308298 SHANK2Q9UPX8 1470 aa28.86■■■□□ 2.21
SSH3-202ENST00000308298 KDM5BQ9UGL1 1544 aa28.85■■■□□ 2.21
SSH3-202ENST00000308298 CDC42BPBQ9Y5S2 1711 aa28.84■■■□□ 2.21
SSH3-202ENST00000308298 ANKRD30AQ9BXX3 1397 aa28.82■■■□□ 2.2
SSH3-202ENST00000308298 ARHGEF5Q12774 1597 aa28.81■■■□□ 2.2
SSH3-202ENST00000308298 SAMD9LQ8IVG5 1584 aa28.77■■■□□ 2.2
SSH3-202ENST00000308298 C9orf84Q5VXU9 1444 aa28.77■■■□□ 2.2
SSH3-202ENST00000308298 TTC37Q6PGP7 1564 aa28.76■■■□□ 2.19
SSH3-202ENST00000308298 UHRF1BP1LA0JNW5 1464 aa28.74■■■□□ 2.19
SSH3-202ENST00000308298 PZPP20742 1482 aa28.74■■■□□ 2.19
SSH3-202ENST00000308298 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.74■■■□□ 2.19
SSH3-202ENST00000308298 ANKRD30BQ9BXX2 1392 aa28.74■■■□□ 2.19
SSH3-202ENST00000308298 ZCCHC11Q5TAX3 1644 aaKnown RBP28.73■■■□□ 2.19
SSH3-202ENST00000308298 MBD5Q9P267 1494 aa28.72■■■□□ 2.19
SSH3-202ENST00000308298 MYO5CQ9NQX4 1742 aa28.72■■■□□ 2.19
SSH3-202ENST00000308298 SCAF1Q9H7N4 1312 aaKnown RBP28.71■■■□□ 2.19
SSH3-202ENST00000308298 SLC4A1APQ9BWU0 796 aaKnown RBP28.71■■■□□ 2.19
SSH3-202ENST00000308298 ANKRD50Q9ULJ7 1429 aa28.71■■■□□ 2.19
SSH3-202ENST00000308298 FOXD1Q16676 465 aa28.7■■■□□ 2.19
SSH3-202ENST00000308298 RPRD2Q5VT52 1461 aaKnown RBP28.69■■■□□ 2.18
SSH3-202ENST00000308298 YTHDC1Q96MU7 727 aaKnown RBP28.69■■■□□ 2.18
SSH3-202ENST00000308298 CCDC141Q6ZP82 1450 aa28.69■■■□□ 2.18
SSH3-202ENST00000308298 TSPY4P0CV99 314 aa28.68■■■□□ 2.18
SSH3-202ENST00000308298 TSPY10P0CW01 314 aa28.68■■■□□ 2.18
SSH3-202ENST00000308298 ARHGAP5Q13017 1502 aa28.67■■■□□ 2.18
SSH3-202ENST00000308298 HNRNPMP52272 730 aaKnown RBP eCLIP28.65■■■□□ 2.18
SSH3-202ENST00000308298 RSPH4AQ5TD94 716 aa28.62■■■□□ 2.17
SSH3-202ENST00000308298 SYCP2Q9BX26 1530 aa28.62■■■□□ 2.17
SSH3-202ENST00000308298 KIF15Q9NS87 1388 aa28.6■■■□□ 2.17
SSH3-202ENST00000308298 KIAA1107Q9UPP5 1409 aa28.6■■■□□ 2.17
SSH3-202ENST00000308298 TEX14Q8IWB6 1497 aa28.6■■■□□ 2.17
SSH3-202ENST00000308298 KDM5DQ9BY66 1539 aa28.59■■■□□ 2.17
SSH3-202ENST00000308298 MAST1Q9Y2H9 1570 aa28.59■■■□□ 2.17
SSH3-202ENST00000308298 HIRIP3Q9BW71 556 aaPredicted RBP28.59■■■□□ 2.17
SSH3-202ENST00000308298 L3MBTL2Q969R5 705 aa28.59■■■□□ 2.17
SSH3-202ENST00000308298 PLEKHH2Q8IVE3 1493 aa28.57■■■□□ 2.16
SSH3-202ENST00000308298 DDX10Q13206 875 aaKnown RBP28.57■■■□□ 2.16
SSH3-202ENST00000308298 KCNH8Q96L42 1107 aa28.52■■■□□ 2.16
SSH3-202ENST00000308298 PLCH2O75038 1416 aa28.51■■■□□ 2.15
SSH3-202ENST00000308298 NUP155O75694 1391 aa28.51■■■□□ 2.15
SSH3-202ENST00000308298 PKD2Q13563 968 aa28.5■■■□□ 2.15
SSH3-202ENST00000308298 PLXNC1O60486 1568 aa28.49■■■□□ 2.15
SSH3-202ENST00000308298 OSCARQ8IYS5 282 aa28.46■■■□□ 2.15
SSH3-202ENST00000308298 ABCC1P33527 1531 aa28.43■■■□□ 2.14
SSH3-202ENST00000308298 ARHGEF12Q9NZN5 1544 aa28.43■■■□□ 2.14
SSH3-202ENST00000308298 ARAP3Q8WWN8 1544 aa28.42■■■□□ 2.14
SSH3-202ENST00000308298 UNC13BO14795 1591 aa28.42■■■□□ 2.14
SSH3-202ENST00000308298 HSPA5P11021 654 aaKnown RBP28.42■■■□□ 2.14
SSH3-202ENST00000308298 EIF4G2P78344 907 aaKnown RBP eCLIP28.4■■■□□ 2.14
SSH3-202ENST00000308298 EFCAB2Q5VUJ9 269 aa28.4■■■□□ 2.14
SSH3-202ENST00000308298 GTF3C3Q9Y5Q9 886 aa28.4■■■□□ 2.14
SSH3-202ENST00000308298 WDR7Q9Y4E6 1490 aa28.39■■■□□ 2.14
SSH3-202ENST00000308298 NBPF8Q3BBV2 869 aa28.39■■■□□ 2.14
SSH3-202ENST00000308298 FAM135AQ9P2D6 1515 aa28.38■■■□□ 2.13
SSH3-202ENST00000308298 DUOX2Q9NRD8 1548 aa28.35■■■□□ 2.13
SSH3-202ENST00000308298 ABCA9Q8IUA7 1624 aa28.32■■■□□ 2.12
SSH3-202ENST00000308298 IQGAP3Q86VI3 1631 aa28.3■■■□□ 2.12
SSH3-202ENST00000308298 ANP32CO43423 234 aa28.3■■■□□ 2.12
SSH3-202ENST00000308298 ERBINQ96RT1 1412 aa28.29■■■□□ 2.12
SSH3-202ENST00000308298 WASHC2AQ641Q2 1341 aa28.28■■■□□ 2.12
SSH3-202ENST00000308298 TRAPPC8Q9Y2L5 1435 aa28.28■■■□□ 2.12
SSH3-202ENST00000308298 POLR1AO95602 1720 aaPredicted RBP28.28■■■□□ 2.12
SSH3-202ENST00000308298 MAGI2Q86UL8 1455 aa28.25■■■□□ 2.11
SSH3-202ENST00000308298 SPATA31E1Q6ZUB1 1445 aa28.25■■■□□ 2.11
SSH3-202ENST00000308298 CCER2I3L3R5 266 aa28.24■■■□□ 2.11
SSH3-202ENST00000308298 UHRF1BP1Q6BDS2 1440 aa28.23■■■□□ 2.11
SSH3-202ENST00000308298 ASXL2Q76L83 1435 aa28.22■■■□□ 2.11
SSH3-202ENST00000308298 RTEL1-TNFRSF6BF6WH68 1400 aa28.21■■■□□ 2.11
SSH3-202ENST00000308298 ZFYVE16Q7Z3T8 1539 aa28.21■■■□□ 2.11
SSH3-202ENST00000308298 FANCAO15360 1455 aa28.2■■■□□ 2.11
SSH3-202ENST00000308298 CCDC7Q96M83 1385 aa28.18■■■□□ 2.1
SSH3-202ENST00000308298 SPAG9O60271 1321 aaKnown RBP28.17■■■□□ 2.1
SSH3-202ENST00000308298 RALGAPBQ86X10 1494 aa28.17■■■□□ 2.1
SSH3-202ENST00000308298 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.16■■■□□ 2.1
SSH3-202ENST00000308298 CCDC144AA2RUR9 1427 aa28.15■■■□□ 2.1
SSH3-202ENST00000308298 CNTLNQ9NXG0 1405 aa28.15■■■□□ 2.1
SSH3-202ENST00000308298 INO80Q9ULG1 1556 aaPredicted RBP28.15■■■□□ 2.1
SSH3-202ENST00000308298 KDM5CP41229 1560 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms