RNA–Protein interactions for RNA: ENST00000302495.4

HTRA4-201, Transcript of HtrA serine peptidase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTRA4, Length 2,095 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA4-201ENST00000302495 DISP1Q96F81 1524 aa27.61■■■□□ 2.01
HTRA4-201ENST00000302495 ARID3CA6NKF2 412 aa27.6■■■□□ 2.01
HTRA4-201ENST00000302495 CYB5RLQ6IPT4 315 aa27.6■■■□□ 2.01
HTRA4-201ENST00000302495 TRIM52Q96A61 297 aa27.56■■■□□ 2
HTRA4-201ENST00000302495 KDM5BQ9UGL1 1544 aa27.53■■■□□ 2
HTRA4-201ENST00000302495 SUPT16HQ9Y5B9 1047 aaKnown RBP27.53■■■□□ 2
HTRA4-201ENST00000302495 NUP153P49790 1475 aaKnown RBP27.52■■■□□ 2
HTRA4-201ENST00000302495 ANP32CO43423 234 aa27.52■■■□□ 2
HTRA4-201ENST00000302495 CCER2I3L3R5 266 aa27.52■■■□□ 2
HTRA4-201ENST00000302495 KDM6BO15054 1643 aa27.51■■□□□ 1.99
HTRA4-201ENST00000302495 DENND4BO75064 1496 aaPredicted RBP27.51■■□□□ 1.99
HTRA4-201ENST00000302495 RAPGEF6Q8TEU7 1601 aa27.5■■□□□ 1.99
HTRA4-201ENST00000302495 CDK11AQ9UQ88 783 aaPredicted RBP27.5■■□□□ 1.99
HTRA4-201ENST00000302495 ROCK1Q13464 1354 aa27.48■■□□□ 1.99
HTRA4-201ENST00000302495 MPHOSPH9Q99550 1183 aa27.48■■□□□ 1.99
HTRA4-201ENST00000302495 PTPRGP23470 1445 aa27.48■■□□□ 1.99
HTRA4-201ENST00000302495 DAPK1P53355 1430 aa27.47■■□□□ 1.99
HTRA4-201ENST00000302495 DNMT1P26358 1616 aaKnown RBP27.43■■□□□ 1.98
HTRA4-201ENST00000302495 ABCC5O15440 1437 aa27.42■■□□□ 1.98
HTRA4-201ENST00000302495 ZNF644Q9H582 1327 aaPredicted RBP27.37■■□□□ 1.97
HTRA4-201ENST00000302495 TROQ12816 1431 aaPredicted RBP27.37■■□□□ 1.97
HTRA4-201ENST00000302495 HSPA5P11021 654 aaKnown RBP27.32■■□□□ 1.96
HTRA4-201ENST00000302495 L3MBTL2Q969R5 705 aa27.31■■□□□ 1.96
HTRA4-201ENST00000302495 ANKRD30BQ9BXX2 1392 aa27.3■■□□□ 1.96
HTRA4-201ENST00000302495 ADCY10Q96PN6 1610 aa27.3■■□□□ 1.96
HTRA4-201ENST00000302495 PLB1Q6P1J6 1458 aa27.3■■□□□ 1.96
HTRA4-201ENST00000302495 FOXD1Q16676 465 aa27.3■■□□□ 1.96
HTRA4-201ENST00000302495 EIF4G2P78344 907 aaKnown RBP eCLIP27.29■■□□□ 1.96
HTRA4-201ENST00000302495 CFDP1Q9UEE9 299 aaPredicted RBP27.28■■□□□ 1.96
HTRA4-201ENST00000302495 CAMSAP2Q08AD1 1489 aa27.27■■□□□ 1.96
HTRA4-201ENST00000302495 ITSN2Q9NZM3 1697 aa27.27■■□□□ 1.96
HTRA4-201ENST00000302495 UHRF1BP1LA0JNW5 1464 aa27.26■■□□□ 1.95
HTRA4-201ENST00000302495 RPRD2Q5VT52 1461 aaKnown RBP27.26■■□□□ 1.95
HTRA4-201ENST00000302495 ABCC2Q92887 1545 aa27.26■■□□□ 1.95
HTRA4-201ENST00000302495 GPATCH8Q9UKJ3 1502 aaKnown RBP27.25■■□□□ 1.95
HTRA4-201ENST00000302495 WASHC2AQ641Q2 1341 aa27.25■■□□□ 1.95
HTRA4-201ENST00000302495 SLC4A1APQ9BWU0 796 aaKnown RBP27.25■■□□□ 1.95
HTRA4-201ENST00000302495 ABCA8O94911 1581 aa27.24■■□□□ 1.95
HTRA4-201ENST00000302495 NPM1P06748 294 aaKnown RBP eCLIP27.21■■□□□ 1.95
HTRA4-201ENST00000302495 NCOA1Q15788 1441 aa27.19■■□□□ 1.94
HTRA4-201ENST00000302495 KIF14Q15058 1648 aa27.19■■□□□ 1.94
HTRA4-201ENST00000302495 ADGBQ8N7X0 1667 aa27.17■■□□□ 1.94
HTRA4-201ENST00000302495 TEX14Q8IWB6 1497 aa27.17■■□□□ 1.94
HTRA4-201ENST00000302495 ADGRL2O95490 1459 aa27.16■■□□□ 1.94
HTRA4-201ENST00000302495 ZNF777Q9ULD5 760 aaPredicted RBP27.16■■□□□ 1.94
HTRA4-201ENST00000302495 PZPP20742 1482 aa27.14■■□□□ 1.94
HTRA4-201ENST00000302495 FKBP8Q14318 412 aa27.13■■□□□ 1.93
HTRA4-201ENST00000302495 PLEKHD1A6NEE1 506 aa27.12■■□□□ 1.93
HTRA4-201ENST00000302495 NBPF8Q3BBV2 869 aa27.12■■□□□ 1.93
HTRA4-201ENST00000302495 CROCC2H7BZ55 1655 aa27.11■■□□□ 1.93
HTRA4-201ENST00000302495 ANKRD30AQ9BXX3 1397 aa27.11■■□□□ 1.93
HTRA4-201ENST00000302495 CNTLNQ9NXG0 1405 aa27.11■■□□□ 1.93
HTRA4-201ENST00000302495 NEFLP07196 543 aa27.09■■□□□ 1.93
HTRA4-201ENST00000302495 ZCCHC11Q5TAX3 1644 aaKnown RBP27.09■■□□□ 1.93
HTRA4-201ENST00000302495 CCDC7Q96M83 1385 aa27.08■■□□□ 1.93
HTRA4-201ENST00000302495 ATP10BO94823 1461 aa27.06■■□□□ 1.92
HTRA4-201ENST00000302495 KIAA1107Q9UPP5 1409 aa27.05■■□□□ 1.92
HTRA4-201ENST00000302495 C11orf95C9JLR9 678 aaPredicted RBP27.05■■□□□ 1.92
HTRA4-201ENST00000302495 ABCC10Q5T3U5 1492 aa27.04■■□□□ 1.92
HTRA4-201ENST00000302495 SPATA31E1Q6ZUB1 1445 aa27.03■■□□□ 1.92
HTRA4-201ENST00000302495 BCANQ96GW7 911 aa27.02■■□□□ 1.92
HTRA4-201ENST00000302495 ANKRD50Q9ULJ7 1429 aa27.02■■□□□ 1.92
HTRA4-201ENST00000302495 CDC42BPAQ5VT25 1732 aa27.01■■□□□ 1.91
HTRA4-201ENST00000302495 SHANK2Q9UPX8 1470 aa27.01■■□□□ 1.91
HTRA4-201ENST00000302495 HNRNPUQ00839 825 aaKnown RBP eCLIP26.99■■□□□ 1.91
HTRA4-201ENST00000302495 PKD2Q13563 968 aa26.99■■□□□ 1.91
HTRA4-201ENST00000302495 ASXL2Q76L83 1435 aa26.99■■□□□ 1.91
HTRA4-201ENST00000302495 TSHZ2Q9NRE2 1034 aa26.97■■□□□ 1.91
HTRA4-201ENST00000302495 C9orf84Q5VXU9 1444 aa26.97■■□□□ 1.91
HTRA4-201ENST00000302495 MBD5Q9P267 1494 aa26.96■■□□□ 1.91
HTRA4-201ENST00000302495 TRHP20396 242 aaPredicted RBP26.96■■□□□ 1.91
HTRA4-201ENST00000302495 PRKRIP1Q9H875 184 aaPredicted RBP26.94■■□□□ 1.9
HTRA4-201ENST00000302495 KIF7Q2M1P5 1343 aa26.94■■□□□ 1.9
HTRA4-201ENST00000302495 TSPY4P0CV99 314 aa26.94■■□□□ 1.9
HTRA4-201ENST00000302495 TSPY10P0CW01 314 aa26.94■■□□□ 1.9
HTRA4-201ENST00000302495 POLR1AO95602 1720 aaPredicted RBP26.91■■□□□ 1.9
HTRA4-201ENST00000302495 WDR7Q9Y4E6 1490 aa26.91■■□□□ 1.9
HTRA4-201ENST00000302495 NUP155O75694 1391 aa26.9■■□□□ 1.9
HTRA4-201ENST00000302495 DIP2BQ9P265 1576 aa26.88■■□□□ 1.89
HTRA4-201ENST00000302495 ARHGEF5Q12774 1597 aa26.87■■□□□ 1.89
HTRA4-201ENST00000302495 CCDC184Q52MB2 194 aa26.86■■□□□ 1.89
HTRA4-201ENST00000302495 KDM5DQ9BY66 1539 aa26.86■■□□□ 1.89
HTRA4-201ENST00000302495 KIF13AQ9H1H9 1805 aa26.85■■□□□ 1.89
HTRA4-201ENST00000302495 HNRNPMP52272 730 aaKnown RBP eCLIP26.85■■□□□ 1.89
HTRA4-201ENST00000302495 FAM69CQ0P6D2 419 aa26.84■■□□□ 1.89
HTRA4-201ENST00000302495 USP47Q96K76 1375 aa26.84■■□□□ 1.89
HTRA4-201ENST00000302495 KIF15Q9NS87 1388 aa26.84■■□□□ 1.89
HTRA4-201ENST00000302495 ZNF326Q5BKZ1 582 aaKnown RBP26.83■■□□□ 1.89
HTRA4-201ENST00000302495 MRS2Q9HD23 443 aa26.82■■□□□ 1.88
HTRA4-201ENST00000302495 UHRF1BP1Q6BDS2 1440 aa26.81■■□□□ 1.88
HTRA4-201ENST00000302495 GLI2P10070 1586 aa26.79■■□□□ 1.88
HTRA4-201ENST00000302495 RSPH4AQ5TD94 716 aa26.79■■□□□ 1.88
HTRA4-201ENST00000302495 CCDC141Q6ZP82 1450 aa26.78■■□□□ 1.88
HTRA4-201ENST00000302495 ARHGEF12Q9NZN5 1544 aa26.78■■□□□ 1.88
HTRA4-201ENST00000302495 ARID4BQ4LE39 1312 aaPredicted RBP26.77■■□□□ 1.88
HTRA4-201ENST00000302495 FAM9BQ8IZU0 186 aa26.77■■□□□ 1.88
HTRA4-201ENST00000302495 PREX2Q70Z35 1606 aa26.76■■□□□ 1.87
HTRA4-201ENST00000302495 KDM5CP41229 1560 aa26.76■■□□□ 1.87
HTRA4-201ENST00000302495 SAMD9LQ8IVG5 1584 aa26.76■■□□□ 1.87
HTRA4-201ENST00000302495 RALGAPBQ86X10 1494 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms