RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 MCCP23508 829 aa20.51■□□□□ 0.87
SSRP1-202ENST00000293880 DCAF11Q8TEB1 546 aa20.49■□□□□ 0.87
SSRP1-202ENST00000293880 NOL8Q76FK4 1167 aaKnown RBP20.48■□□□□ 0.87
SSRP1-202ENST00000293880 ANO8Q9HCE9 1232 aaPredicted RBP20.47■□□□□ 0.87
SSRP1-202ENST00000293880 A0A0U1RQG5 324 aaPredicted RBP20.46■□□□□ 0.87
SSRP1-202ENST00000293880 HSP90B1P14625 803 aaKnown RBP20.46■□□□□ 0.87
SSRP1-202ENST00000293880 MFAP1P55081 439 aaKnown RBP20.45■□□□□ 0.86
SSRP1-202ENST00000293880 ITPRIPQ8IWB1 547 aa20.44■□□□□ 0.86
SSRP1-202ENST00000293880 TIMELESSQ9UNS1 1208 aa20.44■□□□□ 0.86
SSRP1-202ENST00000293880 NOC3LQ8WTT2 800 aaKnown RBP20.44■□□□□ 0.86
SSRP1-202ENST00000293880 FOXD1Q16676 465 aa20.44■□□□□ 0.86
SSRP1-202ENST00000293880 HSP90AA2PQ14568 343 aaPredicted RBP20.43■□□□□ 0.86
SSRP1-202ENST00000293880 FOXD4L5Q5VV16 416 aaPredicted RBP20.43■□□□□ 0.86
SSRP1-202ENST00000293880 FOXD4L4Q8WXT5 416 aaPredicted RBP20.43■□□□□ 0.86
SSRP1-202ENST00000293880 SRPK2P78362 688 aaKnown RBP20.42■□□□□ 0.86
SSRP1-202ENST00000293880 HSPA5P11021 654 aaKnown RBP20.42■□□□□ 0.86
SSRP1-202ENST00000293880 MS4A1P11836 297 aa20.42■□□□□ 0.86
SSRP1-202ENST00000293880 MORC1Q86VD1 984 aa20.42■□□□□ 0.86
SSRP1-202ENST00000293880 TMF1P82094 1093 aa20.41■□□□□ 0.86
SSRP1-202ENST00000293880 CHMP4BQ9H444 224 aaKnown RBP20.4■□□□□ 0.86
SSRP1-202ENST00000293880 MLECQ14165 292 aa20.39■□□□□ 0.85
SSRP1-202ENST00000293880 ZNF330Q9Y3S2 320 aaPredicted RBP20.38■□□□□ 0.85
SSRP1-202ENST00000293880 CREBRFQ8IUR6 639 aa20.38■□□□□ 0.85
SSRP1-202ENST00000293880 GBP4Q96PP9 640 aa20.37■□□□□ 0.85
SSRP1-202ENST00000293880 STK26Q9P289 416 aa20.37■□□□□ 0.85
SSRP1-202ENST00000293880 KIAA2012Q0VF49 1180 aa20.37■□□□□ 0.85
SSRP1-202ENST00000293880 GOLGA6L3A6NEY3 463 aa20.36■□□□□ 0.85
SSRP1-202ENST00000293880 TSHZ2Q9NRE2 1034 aa20.36■□□□□ 0.85
SSRP1-202ENST00000293880 PATL2C9JE40 543 aaKnown RBP20.35■□□□□ 0.85
SSRP1-202ENST00000293880 WRNQ14191 1432 aaPredicted RBP eCLIP20.35■□□□□ 0.85
SSRP1-202ENST00000293880 KIAA1211Q6ZU35 1233 aa20.34■□□□□ 0.85
SSRP1-202ENST00000293880 CCDC146Q8IYE0 955 aa20.32■□□□□ 0.84
SSRP1-202ENST00000293880 RTF1Q92541 710 aaKnown RBP20.32■□□□□ 0.84
SSRP1-202ENST00000293880 RCAN3Q9UKA8 241 aa20.32■□□□□ 0.84
SSRP1-202ENST00000293880 EIF4G1Q04637 1599 aaKnown RBP20.32■□□□□ 0.84
SSRP1-202ENST00000293880 CALRP27797 417 aaKnown RBP20.32■□□□□ 0.84
SSRP1-202ENST00000293880 PTMSP20962 102 aa20.31■□□□□ 0.84
SSRP1-202ENST00000293880 SLC4A3P48751 1232 aa20.29■□□□□ 0.84
SSRP1-202ENST00000293880 TRIM6-TRIM34B2RNG4 842 aa20.29■□□□□ 0.84
SSRP1-202ENST00000293880 KIF27Q86VH2 1401 aa20.28■□□□□ 0.84
SSRP1-202ENST00000293880 PRM3Q9NNZ6 103 aa20.28■□□□□ 0.84
SSRP1-202ENST00000293880 KTN1Q86UP2 1357 aaKnown RBP20.27■□□□□ 0.84
SSRP1-202ENST00000293880 CHMP3Q9Y3E7 222 aa20.26■□□□□ 0.83
SSRP1-202ENST00000293880 PAK3O75914 559 aaPredicted RBP20.26■□□□□ 0.83
SSRP1-202ENST00000293880 IPO9Q96P70 1041 aaKnown RBP20.24■□□□□ 0.83
SSRP1-202ENST00000293880 FOXD4L6Q3SYB3 417 aaPredicted RBP20.24■□□□□ 0.83
SSRP1-202ENST00000293880 FOXD4L3Q6VB84 417 aaPredicted RBP20.24■□□□□ 0.83
SSRP1-202ENST00000293880 CLUAP1Q96AJ1 413 aa20.24■□□□□ 0.83
SSRP1-202ENST00000293880 CCER2I3L3R5 266 aa20.23■□□□□ 0.83
SSRP1-202ENST00000293880 RWDD1Q9H446 243 aaPredicted RBP20.23■□□□□ 0.83
SSRP1-202ENST00000293880 U2AF1L5P0DN76 240 aaPredicted RBP20.22■□□□□ 0.83
SSRP1-202ENST00000293880 U2AF1Q01081 240 aaKnown RBP eCLIP20.22■□□□□ 0.83
SSRP1-202ENST00000293880 GOLGA6L1Q8N7Z2 621 aa20.22■□□□□ 0.83
SSRP1-202ENST00000293880 CCNB3Q8WWL7 1395 aa20.22■□□□□ 0.83
SSRP1-202ENST00000293880 CCDC9Q9Y3X0 531 aaKnown RBP20.21■□□□□ 0.83
SSRP1-202ENST00000293880 ZNF771Q7L3S4 317 aaPredicted RBP20.2■□□□□ 0.82
SSRP1-202ENST00000293880 CECR2Q9BXF3 1484 aa20.2■□□□□ 0.82
SSRP1-202ENST00000293880 TPM4P67936 248 aa20.2■□□□□ 0.82
SSRP1-202ENST00000293880 SLC4A10Q6U841 1118 aa20.19■□□□□ 0.82
SSRP1-202ENST00000293880 SYAP1Q96A49 352 aaPredicted RBP20.19■□□□□ 0.82
SSRP1-202ENST00000293880 FBXO3Q9UK99 471 aa20.19■□□□□ 0.82
SSRP1-202ENST00000293880 ROCK2O75116 1388 aaKnown RBP20.19■□□□□ 0.82
SSRP1-202ENST00000293880 TNIKQ9UKE5 1360 aa20.18■□□□□ 0.82
SSRP1-202ENST00000293880 CEP164Q9UPV0 1460 aa20.18■□□□□ 0.82
SSRP1-202ENST00000293880 TCERG1O14776 1098 aaKnown RBP20.18■□□□□ 0.82
SSRP1-202ENST00000293880 SMC4Q9NTJ3 1288 aa20.18■□□□□ 0.82
SSRP1-202ENST00000293880 IPO8O15397 1037 aaKnown RBP20.17■□□□□ 0.82
SSRP1-202ENST00000293880 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.17■□□□□ 0.82
SSRP1-202ENST00000293880 NUTM2DQ5VT03 806 aaPredicted RBP20.16■□□□□ 0.82
SSRP1-202ENST00000293880 CALD1Q05682 793 aaKnown RBP20.15■□□□□ 0.82
SSRP1-202ENST00000293880 SETQ01105 290 aaPredicted RBP20.15■□□□□ 0.82
SSRP1-202ENST00000293880 RASSF8Q8NHQ8 419 aa20.15■□□□□ 0.82
SSRP1-202ENST00000293880 TAF7LQ5H9L4 462 aa20.14■□□□□ 0.81
SSRP1-202ENST00000293880 PMFBP1Q8TBY8 1022 aa20.13■□□□□ 0.81
SSRP1-202ENST00000293880 GORABQ5T7V8 394 aa20.13■□□□□ 0.81
SSRP1-202ENST00000293880 KANK1Q14678 1352 aa20.13■□□□□ 0.81
SSRP1-202ENST00000293880 BCL11BQ9C0K0 894 aaPredicted RBP20.13■□□□□ 0.81
SSRP1-202ENST00000293880 BAZ1AQ9NRL2 1556 aaPredicted RBP20.12■□□□□ 0.81
SSRP1-202ENST00000293880 CSB-PGBD3P0DP91 1061 aa20.12■□□□□ 0.81
SSRP1-202ENST00000293880 RSPH6AQ9H0K4 717 aa20.12■□□□□ 0.81
SSRP1-202ENST00000293880 PKD2Q13563 968 aa20.12■□□□□ 0.81
SSRP1-202ENST00000293880 HDGFL2Q7Z4V5 671 aaPredicted RBP20.12■□□□□ 0.81
SSRP1-202ENST00000293880 SETD5Q9C0A6 1442 aa20.11■□□□□ 0.81
SSRP1-202ENST00000293880 CFAP44Q96MT7 982 aa20.11■□□□□ 0.81
SSRP1-202ENST00000293880 HTATSF1O43719 755 aaKnown RBP20.11■□□□□ 0.81
SSRP1-202ENST00000293880 PLIN1O60240 522 aa20.11■□□□□ 0.81
SSRP1-202ENST00000293880 CUX2O14529 1486 aa20.11■□□□□ 0.81
SSRP1-202ENST00000293880 CCAR2Q8N163 923 aaKnown RBP20.1■□□□□ 0.81
SSRP1-202ENST00000293880 RRP7AQ9Y3A4 280 aaKnown RBP20.1■□□□□ 0.81
SSRP1-202ENST00000293880 PES1O00541 588 aaKnown RBP20.1■□□□□ 0.81
SSRP1-202ENST00000293880 EEA1Q15075 1411 aa20.1■□□□□ 0.81
SSRP1-202ENST00000293880 GGT6Q6P531 493 aa20.08■□□□□ 0.81
SSRP1-202ENST00000293880 VPS53Q5VIR6 699 aa20.08■□□□□ 0.8
SSRP1-202ENST00000293880 TOMM22Q9NS69 142 aa20.07■□□□□ 0.8
SSRP1-202ENST00000293880 ZNF592Q92610 1267 aa20.06■□□□□ 0.8
SSRP1-202ENST00000293880 GPATCH3Q96I76 525 aa20.06■□□□□ 0.8
SSRP1-202ENST00000293880 FAM13BQ9NYF5 915 aa20.05■□□□□ 0.8
SSRP1-202ENST00000293880 APPP05067 770 aa20.05■□□□□ 0.8
SSRP1-202ENST00000293880 WWC1Q8IX03 1113 aa20.04■□□□□ 0.8
SSRP1-202ENST00000293880 KANK4Q5T7N3 995 aaPredicted RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms