RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 ABCC10Q5T3U5 1492 aa33.73■■■□□ 2.99
RAB40B-201ENST00000269347 ITSN2Q9NZM3 1697 aa33.73■■■□□ 2.99
RAB40B-201ENST00000269347 AKNAQ7Z591 1439 aa33.73■■■□□ 2.99
RAB40B-201ENST00000269347 CLASP1Q7Z460 1538 aa33.72■■■□□ 2.99
RAB40B-201ENST00000269347 CFDP1Q9UEE9 299 aaPredicted RBP33.7■■■□□ 2.99
RAB40B-201ENST00000269347 PLEKHD1A6NEE1 506 aa33.7■■■□□ 2.98
RAB40B-201ENST00000269347 ZNF777Q9ULD5 760 aaPredicted RBP33.66■■■□□ 2.98
RAB40B-201ENST00000269347 ROCK1Q13464 1354 aa33.6■■■□□ 2.97
RAB40B-201ENST00000269347 CROCC2H7BZ55 1655 aa33.57■■■□□ 2.96
RAB40B-201ENST00000269347 MIER1Q8N108 512 aa33.56■■■□□ 2.96
RAB40B-201ENST00000269347 TRIM52Q96A61 297 aa33.55■■■□□ 2.96
RAB40B-201ENST00000269347 ABCC2Q92887 1545 aa33.53■■■□□ 2.96
RAB40B-201ENST00000269347 PPP1R15AO75807 674 aaPredicted RBP33.5■■■□□ 2.95
RAB40B-201ENST00000269347 FOXD1Q16676 465 aa33.5■■■□□ 2.95
RAB40B-201ENST00000269347 CDC42BPBQ9Y5S2 1711 aa33.5■■■□□ 2.95
RAB40B-201ENST00000269347 NCOA1Q15788 1441 aa33.49■■■□□ 2.95
RAB40B-201ENST00000269347 ADGBQ8N7X0 1667 aa33.49■■■□□ 2.95
RAB40B-201ENST00000269347 KDM5BQ9UGL1 1544 aa33.48■■■□□ 2.95
RAB40B-201ENST00000269347 MPHOSPH9Q99550 1183 aa33.47■■■□□ 2.95
RAB40B-201ENST00000269347 TTC37Q6PGP7 1564 aa33.46■■■□□ 2.95
RAB40B-201ENST00000269347 TIMELESSQ9UNS1 1208 aa33.45■■■□□ 2.95
RAB40B-201ENST00000269347 ADGRL2O95490 1459 aa33.42■■■□□ 2.94
RAB40B-201ENST00000269347 SAMD9LQ8IVG5 1584 aa33.41■■■□□ 2.94
RAB40B-201ENST00000269347 PREX2Q70Z35 1606 aa33.41■■■□□ 2.94
RAB40B-201ENST00000269347 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.41■■■□□ 2.94
RAB40B-201ENST00000269347 TONSLQ96HA7 1378 aa33.4■■■□□ 2.94
RAB40B-201ENST00000269347 ZCCHC11Q5TAX3 1644 aaKnown RBP33.39■■■□□ 2.94
RAB40B-201ENST00000269347 HNRNPMP52272 730 aaKnown RBP eCLIP33.38■■■□□ 2.93
RAB40B-201ENST00000269347 MBD5Q9P267 1494 aa33.37■■■□□ 2.93
RAB40B-201ENST00000269347 HIRIP3Q9BW71 556 aaPredicted RBP33.34■■■□□ 2.93
RAB40B-201ENST00000269347 PZPP20742 1482 aa33.33■■■□□ 2.93
RAB40B-201ENST00000269347 C9orf84Q5VXU9 1444 aa33.32■■■□□ 2.92
RAB40B-201ENST00000269347 KCNH8Q96L42 1107 aa33.3■■■□□ 2.92
RAB40B-201ENST00000269347 UHRF1BP1LA0JNW5 1464 aa33.29■■■□□ 2.92
RAB40B-201ENST00000269347 SHANK2Q9UPX8 1470 aa33.28■■■□□ 2.92
RAB40B-201ENST00000269347 ANKRD30AQ9BXX3 1397 aa33.28■■■□□ 2.92
RAB40B-201ENST00000269347 ARHGEF5Q12774 1597 aa33.27■■■□□ 2.92
RAB40B-201ENST00000269347 ANKRD30BQ9BXX2 1392 aa33.27■■■□□ 2.92
RAB40B-201ENST00000269347 SLC4A1APQ9BWU0 796 aaKnown RBP33.24■■■□□ 2.91
RAB40B-201ENST00000269347 SYCP2Q9BX26 1530 aa33.23■■■□□ 2.91
RAB40B-201ENST00000269347 ANKRD50Q9ULJ7 1429 aa33.23■■■□□ 2.91
RAB40B-201ENST00000269347 MYO5CQ9NQX4 1742 aa33.23■■■□□ 2.91
RAB40B-201ENST00000269347 ARHGAP5Q13017 1502 aa33.22■■■□□ 2.91
RAB40B-201ENST00000269347 CCDC141Q6ZP82 1450 aa33.18■■■□□ 2.9
RAB40B-201ENST00000269347 ARHGEF12Q9NZN5 1544 aa33.16■■■□□ 2.9
RAB40B-201ENST00000269347 TSPY4P0CV99 314 aa33.15■■■□□ 2.9
RAB40B-201ENST00000269347 TSPY10P0CW01 314 aa33.15■■■□□ 2.9
RAB40B-201ENST00000269347 L3MBTL2Q969R5 705 aa33.14■■■□□ 2.9
RAB40B-201ENST00000269347 YTHDC1Q96MU7 727 aaKnown RBP33.14■■■□□ 2.9
RAB40B-201ENST00000269347 RPRD2Q5VT52 1461 aaKnown RBP33.13■■■□□ 2.89
RAB40B-201ENST00000269347 KIF15Q9NS87 1388 aa33.13■■■□□ 2.89
RAB40B-201ENST00000269347 TEX14Q8IWB6 1497 aa33.09■■■□□ 2.89
RAB40B-201ENST00000269347 PLCH2O75038 1416 aa33.07■■■□□ 2.88
RAB40B-201ENST00000269347 ACIN1Q9UKV3 1341 aaKnown RBP33.07■■■□□ 2.88
RAB40B-201ENST00000269347 SCAF1Q9H7N4 1312 aaKnown RBP33.06■■■□□ 2.88
RAB40B-201ENST00000269347 PKD2Q13563 968 aa33.06■■■□□ 2.88
RAB40B-201ENST00000269347 DDX10Q13206 875 aaKnown RBP33.05■■■□□ 2.88
RAB40B-201ENST00000269347 KIAA1107Q9UPP5 1409 aa33.04■■■□□ 2.88
RAB40B-201ENST00000269347 NUP155O75694 1391 aa33.03■■■□□ 2.88
RAB40B-201ENST00000269347 MAST1Q9Y2H9 1570 aa33.01■■■□□ 2.88
RAB40B-201ENST00000269347 NBPF8Q3BBV2 869 aa33.01■■■□□ 2.87
RAB40B-201ENST00000269347 OSCARQ8IYS5 282 aa33■■■□□ 2.87
RAB40B-201ENST00000269347 KDM5DQ9BY66 1539 aa32.99■■■□□ 2.87
RAB40B-201ENST00000269347 WDR7Q9Y4E6 1490 aa32.96■■■□□ 2.87
RAB40B-201ENST00000269347 RSPH4AQ5TD94 716 aa32.96■■■□□ 2.87
RAB40B-201ENST00000269347 ABCC1P33527 1531 aa32.95■■■□□ 2.87
RAB40B-201ENST00000269347 TRAPPC8Q9Y2L5 1435 aa32.95■■■□□ 2.87
RAB40B-201ENST00000269347 PLEKHH2Q8IVE3 1493 aa32.91■■■□□ 2.86
RAB40B-201ENST00000269347 PLXNC1O60486 1568 aa32.9■■■□□ 2.86
RAB40B-201ENST00000269347 EFCAB2Q5VUJ9 269 aa32.9■■■□□ 2.86
RAB40B-201ENST00000269347 HSPA5P11021 654 aaKnown RBP32.89■■■□□ 2.86
RAB40B-201ENST00000269347 CENPBP07199 599 aaPredicted RBP32.87■■■□□ 2.85
RAB40B-201ENST00000269347 FAM135AQ9P2D6 1515 aa32.87■■■□□ 2.85
RAB40B-201ENST00000269347 ASXL2Q76L83 1435 aa32.85■■■□□ 2.85
RAB40B-201ENST00000269347 ABCA9Q8IUA7 1624 aa32.84■■■□□ 2.85
RAB40B-201ENST00000269347 UNC13BO14795 1591 aa32.83■■■□□ 2.85
RAB40B-201ENST00000269347 AFAP1Q8N556 730 aa32.82■■■□□ 2.84
RAB40B-201ENST00000269347 ARAP3Q8WWN8 1544 aa32.8■■■□□ 2.84
RAB40B-201ENST00000269347 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.76■■■□□ 2.84
RAB40B-201ENST00000269347 DUOX2Q9NRD8 1548 aa32.75■■■□□ 2.83
RAB40B-201ENST00000269347 C11orf95C9JLR9 678 aaPredicted RBP32.75■■■□□ 2.83
RAB40B-201ENST00000269347 WASHC2AQ641Q2 1341 aa32.75■■■□□ 2.83
RAB40B-201ENST00000269347 FANCAO15360 1455 aa32.74■■■□□ 2.83
RAB40B-201ENST00000269347 ZFYVE16Q7Z3T8 1539 aa32.72■■■□□ 2.83
RAB40B-201ENST00000269347 EIF4G2P78344 907 aaKnown RBP eCLIP32.72■■■□□ 2.831e-6■■■■■ 29.4
RAB40B-201ENST00000269347 PLA2R1Q13018 1463 aa32.71■■■□□ 2.83
RAB40B-201ENST00000269347 IQGAP3Q86VI3 1631 aa32.7■■■□□ 2.83
RAB40B-201ENST00000269347 SPATA31E1Q6ZUB1 1445 aa32.68■■■□□ 2.82
RAB40B-201ENST00000269347 MAGI2Q86UL8 1455 aa32.68■■■□□ 2.82
RAB40B-201ENST00000269347 ERBINQ96RT1 1412 aa32.67■■■□□ 2.82
RAB40B-201ENST00000269347 ZNF326Q5BKZ1 582 aaKnown RBP32.66■■■□□ 2.82
RAB40B-201ENST00000269347 SPAG9O60271 1321 aaKnown RBP32.66■■■□□ 2.82
RAB40B-201ENST00000269347 GTF3C3Q9Y5Q9 886 aa32.63■■■□□ 2.81
RAB40B-201ENST00000269347 ADGRL1O94910 1474 aa32.62■■■□□ 2.81
RAB40B-201ENST00000269347 INO80Q9ULG1 1556 aaPredicted RBP32.62■■■□□ 2.81
RAB40B-201ENST00000269347 SCAPERQ9BY12 1400 aa32.61■■■□□ 2.81
RAB40B-201ENST00000269347 RTEL1-TNFRSF6BF6WH68 1400 aa32.59■■■□□ 2.81
RAB40B-201ENST00000269347 ATP7AQ04656 1500 aa32.57■■■□□ 2.8
RAB40B-201ENST00000269347 UHRF1BP1Q6BDS2 1440 aa32.57■■■□□ 2.8
RAB40B-201ENST00000269347 KDM2AQ9Y2K7 1162 aa32.56■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms