RNA–Protein interactions for RNA: ENST00000265343.9

AFF4-201, Transcript of AF4/FMR2 family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AFF4, Length 9,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-201ENST00000265343 ZNF771Q7L3S4 317 aaPredicted RBP18.73■□□□□ 0.59
AFF4-201ENST00000265343 PMFBP1Q8TBY8 1022 aa18.73■□□□□ 0.59
AFF4-201ENST00000265343 PHLDB1Q86UU1 1377 aa18.73■□□□□ 0.59
AFF4-201ENST00000265343 GSE1Q14687 1217 aa18.72■□□□□ 0.59
AFF4-201ENST00000265343 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.72■□□□□ 0.59
AFF4-201ENST00000265343 KIF16BQ96L93 1317 aa18.72■□□□□ 0.59
AFF4-201ENST00000265343 ABCC9O60706 1549 aa18.71■□□□□ 0.59
AFF4-201ENST00000265343 KIF3AQ9Y496 699 aa18.7■□□□□ 0.58
AFF4-201ENST00000265343 KTN1Q86UP2 1357 aaKnown RBP18.7■□□□□ 0.58
AFF4-201ENST00000265343 NPM1P06748 294 aaKnown RBP eCLIP18.69■□□□□ 0.58
AFF4-201ENST00000265343 CHMP4AQ9BY43 222 aa18.69■□□□□ 0.58
AFF4-201ENST00000265343 SLKQ9H2G2 1235 aaPredicted RBP18.69■□□□□ 0.58
AFF4-201ENST00000265343 ATP6V1DQ9Y5K8 247 aa18.69■□□□□ 0.58
AFF4-201ENST00000265343 TULP1O00294 542 aaPredicted RBP18.68■□□□□ 0.58
AFF4-201ENST00000265343 SPRYD3Q8NCJ5 442 aa18.68■□□□□ 0.58
AFF4-201ENST00000265343 FHAD1B1AJZ9 1412 aa18.68■□□□□ 0.58
AFF4-201ENST00000265343 TSHZ2Q9NRE2 1034 aa18.68■□□□□ 0.58
AFF4-201ENST00000265343 ST18O60284 1047 aa18.68■□□□□ 0.58
AFF4-201ENST00000265343 GPATCH3Q96I76 525 aa18.68■□□□□ 0.58
AFF4-201ENST00000265343 CHMP4CQ96CF2 233 aa18.66■□□□□ 0.58
AFF4-201ENST00000265343 RCAN3Q9UKA8 241 aa18.66■□□□□ 0.58
AFF4-201ENST00000265343 CWC15Q9P013 229 aaKnown RBP18.65■□□□□ 0.58
AFF4-201ENST00000265343 FANCIQ9NVI1 1328 aa18.65■□□□□ 0.58
AFF4-201ENST00000265343 TNIKQ9UKE5 1360 aa18.65■□□□□ 0.58
AFF4-201ENST00000265343 PPP1R15AO75807 674 aaPredicted RBP18.64■□□□□ 0.57
AFF4-201ENST00000265343 TMF1P82094 1093 aa18.63■□□□□ 0.57
AFF4-201ENST00000265343 RRP7BPQ9NSQ0 103 aa18.63■□□□□ 0.57
AFF4-201ENST00000265343 TSR1Q2NL82 804 aaKnown RBP18.62■□□□□ 0.57
AFF4-201ENST00000265343 CLSTN1O94985 981 aa18.62■□□□□ 0.57
AFF4-201ENST00000265343 RALBP1Q15311 655 aa18.61■□□□□ 0.57
AFF4-201ENST00000265343 HDAC5Q9UQL6 1122 aa18.61■□□□□ 0.57
AFF4-201ENST00000265343 CCDC66A2RUB6 948 aa18.61■□□□□ 0.57
AFF4-201ENST00000265343 TPM1P09493 284 aa18.61■□□□□ 0.57
AFF4-201ENST00000265343 CCNB3Q8WWL7 1395 aa18.61■□□□□ 0.57
AFF4-201ENST00000265343 NEUROD2Q15784 382 aa18.6■□□□□ 0.57
AFF4-201ENST00000265343 PABPN1Q86U42 306 aaKnown RBP eCLIP18.59■□□□□ 0.57
AFF4-201ENST00000265343 APPP05067 770 aa18.59■□□□□ 0.57
AFF4-201ENST00000265343 ACBD3Q9H3P7 528 aa18.59■□□□□ 0.57
AFF4-201ENST00000265343 GOLGA6L19H0YKK7 550 aa18.58■□□□□ 0.57
AFF4-201ENST00000265343 C14orf37Q86TY3 774 aa18.58■□□□□ 0.56
AFF4-201ENST00000265343 CEP89Q96ST8 783 aa18.57■□□□□ 0.56
AFF4-201ENST00000265343 ARGLU1Q9NWB6 273 aaPredicted RBP18.57■□□□□ 0.56
AFF4-201ENST00000265343 RRP12Q5JTH9 1297 aaKnown RBP18.56■□□□□ 0.56
AFF4-201ENST00000265343 RB1CC1Q8TDY2 1594 aa18.56■□□□□ 0.56
AFF4-201ENST00000265343 PDE3BQ13370 1112 aa18.56■□□□□ 0.56
AFF4-201ENST00000265343 ROCK2O75116 1388 aaKnown RBP18.55■□□□□ 0.56
AFF4-201ENST00000265343 HMMRO75330 724 aa18.55■□□□□ 0.56
AFF4-201ENST00000265343 CDR1P51861 262 aa18.54■□□□□ 0.56
AFF4-201ENST00000265343 ZBTB7CA1YPR0 619 aa18.53■□□□□ 0.56
AFF4-201ENST00000265343 EIF3AQ14152 1382 aaKnown RBP18.52■□□□□ 0.56
AFF4-201ENST00000265343 A0A0G2JS52 829 aa18.52■□□□□ 0.56
AFF4-201ENST00000265343 CC2D1BQ5T0F9 858 aaKnown RBP18.52■□□□□ 0.56
AFF4-201ENST00000265343 TAF3Q5VWG9 929 aa18.52■□□□□ 0.56
AFF4-201ENST00000265343 FAM43AQ8N2R8 423 aa18.52■□□□□ 0.56
AFF4-201ENST00000265343 AK7Q96M32 723 aa18.52■□□□□ 0.56
AFF4-201ENST00000265343 PKNOX2Q96KN3 472 aa18.51■□□□□ 0.55
AFF4-201ENST00000265343 KIF27Q86VH2 1401 aa18.51■□□□□ 0.55
AFF4-201ENST00000265343 TPM2P07951 284 aa18.51■□□□□ 0.55
AFF4-201ENST00000265343 ARHGAP35Q9NRY4 1499 aa18.51■□□□□ 0.55
AFF4-201ENST00000265343 SETD5Q9C0A6 1442 aa18.51■□□□□ 0.55
AFF4-201ENST00000265343 TAOK2Q9UL54 1235 aa18.51■□□□□ 0.55
AFF4-201ENST00000265343 CENPQQ7L2Z9 268 aaPredicted RBP18.5■□□□□ 0.55
AFF4-201ENST00000265343 U2SURPO15042 1029 aaKnown RBP18.49■□□□□ 0.55
AFF4-201ENST00000265343 DIAPH3Q9NSV4 1193 aa18.48■□□□□ 0.55
AFF4-201ENST00000265343 KANK1Q14678 1352 aa18.48■□□□□ 0.55
AFF4-201ENST00000265343 ITPRIPQ8IWB1 547 aa18.48■□□□□ 0.55
AFF4-201ENST00000265343 DCTN1Q14203 1278 aa18.48■□□□□ 0.55
AFF4-201ENST00000265343 IPO7O95373 1038 aaKnown RBP18.48■□□□□ 0.55
AFF4-201ENST00000265343 FAM161AQ3B820 660 aa18.48■□□□□ 0.55
AFF4-201ENST00000265343 NPHP1O15259 732 aa18.47■□□□□ 0.55
AFF4-201ENST00000265343 MFAP1P55081 439 aaKnown RBP18.47■□□□□ 0.55
AFF4-201ENST00000265343 HSP90B2PQ58FF3 399 aa18.47■□□□□ 0.55
AFF4-201ENST00000265343 FAM13BQ9NYF5 915 aa18.46■□□□□ 0.55
AFF4-201ENST00000265343 CCDC191Q8NCU4 936 aa18.46■□□□□ 0.55
AFF4-201ENST00000265343 DDX49Q9Y6V7 483 aaKnown RBP18.46■□□□□ 0.55
AFF4-201ENST00000265343 RDXP35241 583 aaKnown RBP18.46■□□□□ 0.55
AFF4-201ENST00000265343 BECN2A8MW95 431 aa18.45■□□□□ 0.54
AFF4-201ENST00000265343 RGL3Q3MIN7 710 aa18.45■□□□□ 0.54
AFF4-201ENST00000265343 RUFY1Q96T51 708 aa18.44■□□□□ 0.54
AFF4-201ENST00000265343 HSP90B1P14625 803 aaKnown RBP18.44■□□□□ 0.54
AFF4-201ENST00000265343 RTF1Q92541 710 aaKnown RBP18.44■□□□□ 0.54
AFF4-201ENST00000265343 HOOK1Q9UJC3 728 aaKnown RBP18.44■□□□□ 0.54
AFF4-201ENST00000265343 POGKQ9P215 609 aa18.43■□□□□ 0.54
AFF4-201ENST00000265343 CFDP1Q9UEE9 299 aaPredicted RBP18.43■□□□□ 0.54
AFF4-201ENST00000265343 PLEKHD1A6NEE1 506 aa18.42■□□□□ 0.54
AFF4-201ENST00000265343 ANKRD20A12PQ8NF67 263 aa18.42■□□□□ 0.54
AFF4-201ENST00000265343 CCAR2Q8N163 923 aaKnown RBP18.42■□□□□ 0.54
AFF4-201ENST00000265343 HMGN5P82970 282 aaKnown RBP18.41■□□□□ 0.54
AFF4-201ENST00000265343 MORC1Q86VD1 984 aa18.41■□□□□ 0.54
AFF4-201ENST00000265343 TPD52L1Q16890 204 aaPredicted RBP18.41■□□□□ 0.54
AFF4-201ENST00000265343 BAZ1AQ9NRL2 1556 aaPredicted RBP18.4■□□□□ 0.54
AFF4-201ENST00000265343 RASSF8Q8NHQ8 419 aa18.4■□□□□ 0.54
AFF4-201ENST00000265343 WRNQ14191 1432 aaPredicted RBP eCLIP18.39■□□□□ 0.54
AFF4-201ENST00000265343 SF3A1Q15459 793 aaKnown RBP18.39■□□□□ 0.53
AFF4-201ENST00000265343 SPAG9O60271 1321 aaKnown RBP18.38■□□□□ 0.53
AFF4-201ENST00000265343 TRIM6-TRIM34B2RNG4 842 aa18.38■□□□□ 0.53
AFF4-201ENST00000265343 ERCC4Q92889 916 aaPredicted RBP18.38■□□□□ 0.53
AFF4-201ENST00000265343 CCDC39Q9UFE4 941 aa18.38■□□□□ 0.53
AFF4-201ENST00000265343 H3BQV1 296 aa18.37■□□□□ 0.53
AFF4-201ENST00000265343 IFFO2Q5TF58 517 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms