RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 NBPF8Q3BBV2 869 aa23.96■■□□□ 1.43
TRAM1-201ENST00000262213 SENP3-EIF4A1A0A087X0R7 540 aa23.95■■□□□ 1.42
TRAM1-201ENST00000262213 POLR3GLQ9BT43 218 aa23.95■■□□□ 1.42
TRAM1-201ENST00000262213 HECW1Q76N89 1606 aa23.93■■□□□ 1.42
TRAM1-201ENST00000262213 ERCC6Q03468 1493 aa23.92■■□□□ 1.42
TRAM1-201ENST00000262213 GCC2Q8IWJ2 1684 aa23.92■■□□□ 1.42
TRAM1-201ENST00000262213 THOC2Q8NI27 1593 aaKnown RBP23.91■■□□□ 1.42
TRAM1-201ENST00000262213 CDK13Q14004 1512 aaKnown RBP23.9■■□□□ 1.42
TRAM1-201ENST00000262213 NCOA1Q15788 1441 aa23.9■■□□□ 1.42
TRAM1-201ENST00000262213 ARHGEF11O15085 1522 aa23.89■■□□□ 1.41
TRAM1-201ENST00000262213 ERICH6BQ5W0A0 696 aa23.88■■□□□ 1.41
TRAM1-201ENST00000262213 TCOF1Q13428 1488 aaKnown RBP23.88■■□□□ 1.41
TRAM1-201ENST00000262213 KIF7Q2M1P5 1343 aa23.87■■□□□ 1.41
TRAM1-201ENST00000262213 ZBED9Q6R2W3 1325 aa23.87■■□□□ 1.41
TRAM1-201ENST00000262213 ZNF326Q5BKZ1 582 aaKnown RBP23.86■■□□□ 1.41
TRAM1-201ENST00000262213 SLC4A1APQ9BWU0 796 aaKnown RBP23.86■■□□□ 1.41
TRAM1-201ENST00000262213 EPRSP07814 1512 aaKnown RBP23.84■■□□□ 1.41
TRAM1-201ENST00000262213 ZNF644Q9H582 1327 aaPredicted RBP23.83■■□□□ 1.41
TRAM1-201ENST00000262213 IFT140Q96RY7 1462 aa23.82■■□□□ 1.4
TRAM1-201ENST00000262213 ANKRD30BQ9BXX2 1392 aa23.8■■□□□ 1.4
TRAM1-201ENST00000262213 AKNAQ7Z591 1439 aa23.79■■□□□ 1.4
TRAM1-201ENST00000262213 PBRM1Q86U86 1689 aa23.79■■□□□ 1.4
TRAM1-201ENST00000262213 RPRD2Q5VT52 1461 aaKnown RBP23.76■■□□□ 1.39
TRAM1-201ENST00000262213 MIA2Q96PC5 1412 aa23.76■■□□□ 1.39
TRAM1-201ENST00000262213 DAPK1P53355 1430 aa23.74■■□□□ 1.39
TRAM1-201ENST00000262213 TEX14Q8IWB6 1497 aa23.73■■□□□ 1.39
TRAM1-201ENST00000262213 ZNF608Q9ULD9 1512 aaPredicted RBP23.71■■□□□ 1.39
TRAM1-201ENST00000262213 NBR1Q14596 966 aa23.7■■□□□ 1.38
TRAM1-201ENST00000262213 IQGAP2Q13576 1575 aa23.7■■□□□ 1.38
TRAM1-201ENST00000262213 SPATA31E1Q6ZUB1 1445 aa23.7■■□□□ 1.38
TRAM1-201ENST00000262213 ABCC5O15440 1437 aa23.69■■□□□ 1.38
TRAM1-201ENST00000262213 CCDC136Q96JN2 1154 aa23.68■■□□□ 1.38
TRAM1-201ENST00000262213 ZNF777Q9ULD5 760 aaPredicted RBP23.67■■□□□ 1.38
TRAM1-201ENST00000262213 ADAMTS12P58397 1594 aa23.67■■□□□ 1.38
TRAM1-201ENST00000262213 PAK3O75914 559 aaPredicted RBP23.65■■□□□ 1.38
TRAM1-201ENST00000262213 NUDCQ9Y266 331 aa23.65■■□□□ 1.38
TRAM1-201ENST00000262213 NOP58Q9Y2X3 529 aaKnown RBP23.65■■□□□ 1.38
TRAM1-201ENST00000262213 EIF4G3O43432 1585 aaKnown RBP23.65■■□□□ 1.38
TRAM1-201ENST00000262213 ROCK1Q13464 1354 aa23.63■■□□□ 1.37
TRAM1-201ENST00000262213 DEKP35659 375 aaKnown RBP23.63■■□□□ 1.37
TRAM1-201ENST00000262213 USP47Q96K76 1375 aa23.62■■□□□ 1.37
TRAM1-201ENST00000262213 SMG6Q86US8 1419 aaKnown RBP23.62■■□□□ 1.37
TRAM1-201ENST00000262213 DHX29Q7Z478 1369 aaKnown RBP23.62■■□□□ 1.37
TRAM1-201ENST00000262213 TMC1Q8TDI8 760 aa23.59■■□□□ 1.37
TRAM1-201ENST00000262213 DNMT1P26358 1616 aaKnown RBP23.59■■□□□ 1.37
TRAM1-201ENST00000262213 PKD2Q13563 968 aa23.58■■□□□ 1.37
TRAM1-201ENST00000262213 CFDP1Q9UEE9 299 aaPredicted RBP23.57■■□□□ 1.36
TRAM1-201ENST00000262213 POLR1AO95602 1720 aaPredicted RBP23.56■■□□□ 1.36
TRAM1-201ENST00000262213 PZPP20742 1482 aa23.56■■□□□ 1.36
TRAM1-201ENST00000262213 BCORL1Q5H9F3 1711 aa23.56■■□□□ 1.36
TRAM1-201ENST00000262213 SALL2Q9Y467 1007 aaPredicted RBP23.55■■□□□ 1.36
TRAM1-201ENST00000262213 KDM2AQ9Y2K7 1162 aa23.54■■□□□ 1.36
TRAM1-201ENST00000262213 ANP32AP39687 249 aaKnown RBP23.52■■□□□ 1.36
TRAM1-201ENST00000262213 PNISRQ8TF01 805 aaKnown RBP23.52■■□□□ 1.35
TRAM1-201ENST00000262213 PRG4Q92954 1404 aaPredicted RBP23.51■■□□□ 1.35
TRAM1-201ENST00000262213 NUP153P49790 1475 aaKnown RBP23.5■■□□□ 1.35
TRAM1-201ENST00000262213 CARD11Q9BXL7 1154 aa23.5■■□□□ 1.35
TRAM1-201ENST00000262213 MYT1LQ9UL68 1186 aa23.49■■□□□ 1.35
TRAM1-201ENST00000262213 KIAA1107Q9UPP5 1409 aa23.48■■□□□ 1.35
TRAM1-201ENST00000262213 CAMSAP2Q08AD1 1489 aa23.47■■□□□ 1.35
TRAM1-201ENST00000262213 RNF123Q5XPI4 1314 aa23.47■■□□□ 1.35
TRAM1-201ENST00000262213 MAGI1Q96QZ7 1491 aaPredicted RBP23.46■■□□□ 1.35
TRAM1-201ENST00000262213 NPM2Q86SE8 214 aaKnown RBP23.46■■□□□ 1.35
TRAM1-201ENST00000262213 IPO9Q96P70 1041 aaKnown RBP23.45■■□□□ 1.34
TRAM1-201ENST00000262213 MBD5Q9P267 1494 aa23.45■■□□□ 1.34
TRAM1-201ENST00000262213 ST20-MTHFSA0A0A6YYL1 179 aa23.44■■□□□ 1.34
TRAM1-201ENST00000262213 ZBTB47Q9UFB7 747 aaPredicted RBP23.44■■□□□ 1.34
TRAM1-201ENST00000262213 DISP1Q96F81 1524 aa23.43■■□□□ 1.34
TRAM1-201ENST00000262213 KIAA0556O60303 1618 aa23.42■■□□□ 1.34
TRAM1-201ENST00000262213 RAPGEF6Q8TEU7 1601 aa23.41■■□□□ 1.34
TRAM1-201ENST00000262213 KDM5CP41229 1560 aa23.41■■□□□ 1.34
TRAM1-201ENST00000262213 GRIN2AQ12879 1464 aa23.41■■□□□ 1.34
TRAM1-201ENST00000262213 EXOC6Q8TAG9 804 aa23.4■■□□□ 1.34
TRAM1-201ENST00000262213 NUP155O75694 1391 aa23.39■■□□□ 1.34
TRAM1-201ENST00000262213 KIF14Q15058 1648 aa23.39■■□□□ 1.34
TRAM1-201ENST00000262213 DCAF11Q8TEB1 546 aa23.39■■□□□ 1.33
TRAM1-201ENST00000262213 ANKRD30AQ9BXX3 1397 aa23.38■■□□□ 1.33
TRAM1-201ENST00000262213 SYNJ2O15056 1496 aa23.38■■□□□ 1.33
TRAM1-201ENST00000262213 TROQ12816 1431 aaPredicted RBP23.37■■□□□ 1.33
TRAM1-201ENST00000262213 KIF15Q9NS87 1388 aa23.37■■□□□ 1.33
TRAM1-201ENST00000262213 RTL5Q5HYW3 569 aaPredicted RBP23.36■■□□□ 1.33
TRAM1-201ENST00000262213 GPATCH8Q9UKJ3 1502 aaKnown RBP23.36■■□□□ 1.33
TRAM1-201ENST00000262213 ANKRD50Q9ULJ7 1429 aa23.36■■□□□ 1.33
TRAM1-201ENST00000262213 KIAA0586Q9BVV6 1533 aa23.36■■□□□ 1.33
TRAM1-201ENST00000262213 ARID4BQ4LE39 1312 aaPredicted RBP23.35■■□□□ 1.33
TRAM1-201ENST00000262213 RRP1P56182 461 aaKnown RBP23.35■■□□□ 1.33
TRAM1-201ENST00000262213 ROCK2O75116 1388 aaKnown RBP23.35■■□□□ 1.33
TRAM1-201ENST00000262213 PLB1Q6P1J6 1458 aa23.35■■□□□ 1.33
TRAM1-201ENST00000262213 MYBBP1AQ9BQG0 1328 aaKnown RBP23.34■■□□□ 1.33
TRAM1-201ENST00000262213 FBLN2P98095 1184 aa23.34■■□□□ 1.33
TRAM1-201ENST00000262213 ADGBQ8N7X0 1667 aa23.33■■□□□ 1.33
TRAM1-201ENST00000262213 RCAN3Q9UKA8 241 aa23.32■■□□□ 1.32
TRAM1-201ENST00000262213 RALGAPBQ86X10 1494 aa23.3■■□□□ 1.32
TRAM1-201ENST00000262213 BRD4O60885 1362 aaPredicted RBP23.29■■□□□ 1.32
TRAM1-201ENST00000262213 LRPPRCP42704 1394 aaKnown RBP23.29■■□□□ 1.32
TRAM1-201ENST00000262213 RALBP1Q15311 655 aa23.29■■□□□ 1.32
TRAM1-201ENST00000262213 CEP170Q5SW79 1584 aa23.28■■□□□ 1.32
TRAM1-201ENST00000262213 ITSN2Q9NZM3 1697 aa23.28■■□□□ 1.32
TRAM1-201ENST00000262213 CDCA7LQ96GN5 454 aa23.27■■□□□ 1.32
TRAM1-201ENST00000262213 LAS1LQ9Y4W2 734 aaKnown RBP23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms