RNA–Protein interactions for RNA: ENST00000258243.6

URB2-201, Transcript of URB2 ribosome biogenesis 2 homolog (S. cerevisiae), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene URB2, Length 5,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
URB2-201ENST00000258243 FHOD3Q2V2M9 1422 aa14.14□□□□□ -0.15
URB2-201ENST00000258243 HDGFL2Q7Z4V5 671 aaPredicted RBP14.14□□□□□ -0.15
URB2-201ENST00000258243 U2SURPO15042 1029 aaKnown RBP14.13□□□□□ -0.15
URB2-201ENST00000258243 NUP155O75694 1391 aa14.13□□□□□ -0.15
URB2-201ENST00000258243 PAK3O75914 559 aaPredicted RBP14.13□□□□□ -0.15
URB2-201ENST00000258243 NEUROD2Q15784 382 aa14.11□□□□□ -0.15
URB2-201ENST00000258243 CC2D1BQ5T0F9 858 aaKnown RBP14.11□□□□□ -0.15
URB2-201ENST00000258243 SETD5Q9C0A6 1442 aa14.11□□□□□ -0.15
URB2-201ENST00000258243 AMER1Q5JTC6 1135 aaPredicted RBP14.11□□□□□ -0.15
URB2-201ENST00000258243 CSB-PGBD3P0DP91 1061 aa14.09□□□□□ -0.15
URB2-201ENST00000258243 GAPVD1Q14C86 1478 aa14.09□□□□□ -0.15
URB2-201ENST00000258243 NAP1L5Q96NT1 182 aaPredicted RBP14.09□□□□□ -0.15
URB2-201ENST00000258243 KANK4Q5T7N3 995 aaPredicted RBP14.08□□□□□ -0.16
URB2-201ENST00000258243 MORC1Q86VD1 984 aa14.08□□□□□ -0.16
URB2-201ENST00000258243 FTSJ3Q8IY81 847 aaKnown RBP14.08□□□□□ -0.16
URB2-201ENST00000258243 CCDC9Q9Y3X0 531 aaKnown RBP14.07□□□□□ -0.16
URB2-201ENST00000258243 NCAPD3P42695 1498 aa14.07□□□□□ -0.16
URB2-201ENST00000258243 FAM69CQ0P6D2 419 aa14.07□□□□□ -0.16
URB2-201ENST00000258243 FGD5Q6ZNL6 1462 aa14.05□□□□□ -0.16
URB2-201ENST00000258243 RBM19Q9Y4C8 960 aaKnown RBP14.05□□□□□ -0.16
URB2-201ENST00000258243 DDRGK1Q96HY6 314 aa14.05□□□□□ -0.16
URB2-201ENST00000258243 PPP4R2Q9NY27 417 aa14.05□□□□□ -0.16
URB2-201ENST00000258243 NOP58Q9Y2X3 529 aaKnown RBP14.05□□□□□ -0.16
URB2-201ENST00000258243 RTN4Q9NQC3 1192 aaKnown RBP14.04□□□□□ -0.16
URB2-201ENST00000258243 EIF3AQ14152 1382 aaKnown RBP14.04□□□□□ -0.16
URB2-201ENST00000258243 MPHOSPH9Q99550 1183 aa14.04□□□□□ -0.16
URB2-201ENST00000258243 FOXD1Q16676 465 aa14.03□□□□□ -0.16
URB2-201ENST00000258243 RTF1Q92541 710 aaKnown RBP14.03□□□□□ -0.16
URB2-201ENST00000258243 TIMELESSQ9UNS1 1208 aa14.03□□□□□ -0.16
URB2-201ENST00000258243 ROCK2O75116 1388 aaKnown RBP14.02□□□□□ -0.17
URB2-201ENST00000258243 PTMSP20962 102 aa14.01□□□□□ -0.17
URB2-201ENST00000258243 TNNT3P45378 269 aaPredicted RBP14.01□□□□□ -0.17
URB2-201ENST00000258243 RAD54L2Q9Y4B4 1467 aa14.01□□□□□ -0.17
URB2-201ENST00000258243 CHMP4BQ9H444 224 aaKnown RBP14.01□□□□□ -0.17
URB2-201ENST00000258243 NUTM2DQ5VT03 806 aaPredicted RBP14.01□□□□□ -0.17
URB2-201ENST00000258243 TSHZ2Q9NRE2 1034 aa14□□□□□ -0.17
URB2-201ENST00000258243 DEKP35659 375 aaKnown RBP14□□□□□ -0.17
URB2-201ENST00000258243 GOLGA2Q08379 1002 aa13.99□□□□□ -0.17
URB2-201ENST00000258243 CASC1Q6TDU7 716 aa13.99□□□□□ -0.17
URB2-201ENST00000258243 NGDNQ8NEJ9 315 aaKnown RBP13.99□□□□□ -0.17
URB2-201ENST00000258243 OS9Q13438 667 aaPredicted RBP13.99□□□□□ -0.17
URB2-201ENST00000258243 AQRO60306 1485 aaKnown RBP eCLIP13.98□□□□□ -0.172e-6■■■□□ 18.4
URB2-201ENST00000258243 SENP3-EIF4A1A0A087X0R7 540 aa13.98□□□□□ -0.17
URB2-201ENST00000258243 DNTTIP2Q5QJE6 756 aaKnown RBP13.98□□□□□ -0.17
URB2-201ENST00000258243 MS4A1P11836 297 aa13.97□□□□□ -0.17
URB2-201ENST00000258243 MRC2Q9UBG0 1479 aa13.97□□□□□ -0.17
URB2-201ENST00000258243 B4GALNT3Q6L9W6 998 aa13.96□□□□□ -0.17
URB2-201ENST00000258243 TERF2IPQ9NYB0 399 aa13.96□□□□□ -0.17
URB2-201ENST00000258243 CC2D2AQ9P2K1 1620 aa13.96□□□□□ -0.18
URB2-201ENST00000258243 FRAT1Q92837 279 aaPredicted RBP13.94□□□□□ -0.18
URB2-201ENST00000258243 GRIN2BQ13224 1484 aa13.94□□□□□ -0.18
URB2-201ENST00000258243 BECN1Q14457 450 aa13.93□□□□□ -0.18
URB2-201ENST00000258243 PTMAP06454 111 aaKnown RBP13.93□□□□□ -0.18
URB2-201ENST00000258243 UACAQ9BZF9 1416 aa13.93□□□□□ -0.18
URB2-201ENST00000258243 HSPA5P11021 654 aaKnown RBP13.92□□□□□ -0.18
URB2-201ENST00000258243 RAB3GAP2Q9H2M9 1393 aa13.92□□□□□ -0.18
URB2-201ENST00000258243 KTN1Q86UP2 1357 aaKnown RBP13.91□□□□□ -0.18
URB2-201ENST00000258243 TMX4Q9H1E5 349 aaPredicted RBP13.91□□□□□ -0.18
URB2-201ENST00000258243 IGF1RP08069 1367 aa13.9□□□□□ -0.18
URB2-201ENST00000258243 IFT140Q96RY7 1462 aa13.9□□□□□ -0.18
URB2-201ENST00000258243 VGFO15240 615 aaPredicted RBP13.9□□□□□ -0.18
URB2-201ENST00000258243 CALD1Q05682 793 aaKnown RBP13.89□□□□□ -0.19
URB2-201ENST00000258243 ZNF330Q9Y3S2 320 aaPredicted RBP13.89□□□□□ -0.19
URB2-201ENST00000258243 NUTM2FA1L443 756 aa13.88□□□□□ -0.19
URB2-201ENST00000258243 CCER2I3L3R5 266 aa13.88□□□□□ -0.19
URB2-201ENST00000258243 AMPHP49418 695 aa13.87□□□□□ -0.19
URB2-201ENST00000258243 CCDC144AA2RUR9 1427 aa13.87□□□□□ -0.19
URB2-201ENST00000258243 GOLGA6L22H0YM25 854 aa13.87□□□□□ -0.19
URB2-201ENST00000258243 CHMP4AQ9BY43 222 aa13.87□□□□□ -0.19
URB2-201ENST00000258243 U2AF1L5P0DN76 240 aaPredicted RBP13.87□□□□□ -0.19
URB2-201ENST00000258243 U2AF1Q01081 240 aaKnown RBP eCLIP13.87□□□□□ -0.19
URB2-201ENST00000258243 MEX3CQ5U5Q3 659 aaKnown RBP13.86□□□□□ -0.19
URB2-201ENST00000258243 TRAK1Q9UPV9 953 aa13.86□□□□□ -0.19
URB2-201ENST00000258243 PRDM2Q13029 1718 aa13.86□□□□□ -0.19
URB2-201ENST00000258243 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.86□□□□□ -0.19
URB2-201ENST00000258243 NESP48681 1621 aa13.85□□□□□ -0.19
URB2-201ENST00000258243 PRG4Q92954 1404 aaPredicted RBP13.84□□□□□ -0.19
URB2-201ENST00000258243 RUSC2Q8N2Y8 1516 aa13.84□□□□□ -0.19
URB2-201ENST00000258243 EVA1CP58658 441 aa13.83□□□□□ -0.19
URB2-201ENST00000258243 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.82□□□□□ -0.2
URB2-201ENST00000258243 LTV1Q96GA3 475 aaPredicted RBP13.82□□□□□ -0.2
URB2-201ENST00000258243 CFTRP13569 1480 aa13.81□□□□□ -0.2
URB2-201ENST00000258243 KCNJ4P48050 445 aa13.81□□□□□ -0.2
URB2-201ENST00000258243 CHAF1AQ13111 956 aaPredicted RBP13.81□□□□□ -0.2
URB2-201ENST00000258243 RALBP1Q15311 655 aa13.81□□□□□ -0.2
URB2-201ENST00000258243 FGD1P98174 961 aa13.8□□□□□ -0.2
URB2-201ENST00000258243 HMGXB3Q12766 1538 aa13.8□□□□□ -0.2
URB2-201ENST00000258243 L3MBTL2Q969R5 705 aa13.79□□□□□ -0.2
URB2-201ENST00000258243 SYNJ2O15056 1496 aa13.79□□□□□ -0.2
URB2-201ENST00000258243 MYOM3Q5VTT5 1437 aa13.79□□□□□ -0.2
URB2-201ENST00000258243 IPO8O15397 1037 aaKnown RBP13.79□□□□□ -0.2
URB2-201ENST00000258243 RGS3P49796 1198 aa13.78□□□□□ -0.2
URB2-201ENST00000258243 GOLGA6L6A8MZA4 724 aa13.78□□□□□ -0.2
URB2-201ENST00000258243 EVC2Q86UK5 1308 aa13.78□□□□□ -0.2
URB2-201ENST00000258243 ATF3P18847 181 aa13.77□□□□□ -0.2
URB2-201ENST00000258243 STK31Q9BXU1 1019 aa13.77□□□□□ -0.2
URB2-201ENST00000258243 ARHGAP5Q13017 1502 aa13.77□□□□□ -0.21
URB2-201ENST00000258243 ZRSR1Q15695 479 aaKnown RBP13.77□□□□□ -0.21
URB2-201ENST00000258243 COG3Q96JB2 828 aa13.76□□□□□ -0.21
URB2-201ENST00000258243 LMOD3Q0VAK6 560 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms