RNA–Protein interactions for RNA: ENST00000253458.11

GSE1-201, Transcript of Gse1 coiled-coil protein, humanhuman

APPRIS P3 TSL 5 BASIC

Gene GSE1, Length 7,495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-201ENST00000253458 GOLGA6L4A6NEF3 574 aa16.6■□□□□ 0.25
GSE1-201ENST00000253458 NOL8Q76FK4 1167 aaKnown RBP16.6■□□□□ 0.25
GSE1-201ENST00000253458 DRC7Q8IY82 874 aa16.6■□□□□ 0.25
GSE1-201ENST00000253458 VPS53Q5VIR6 699 aa16.59■□□□□ 0.25
GSE1-201ENST00000253458 RAD21O60216 631 aa16.58■□□□□ 0.24
GSE1-201ENST00000253458 DDRGK1Q96HY6 314 aa16.58■□□□□ 0.24
GSE1-201ENST00000253458 CDCA8Q53HL2 280 aa16.58■□□□□ 0.24
GSE1-201ENST00000253458 NGEFQ8N5V2 710 aa16.58■□□□□ 0.24
GSE1-201ENST00000253458 PATL2C9JE40 543 aaKnown RBP16.57■□□□□ 0.24
GSE1-201ENST00000253458 TAF7LQ5H9L4 462 aa16.57■□□□□ 0.24
GSE1-201ENST00000253458 GORABQ5T7V8 394 aa16.56■□□□□ 0.24
GSE1-201ENST00000253458 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.55■□□□□ 0.24
GSE1-201ENST00000253458 CALRP27797 417 aaKnown RBP16.55■□□□□ 0.24
GSE1-201ENST00000253458 NOC3LQ8WTT2 800 aaKnown RBP16.55■□□□□ 0.24
GSE1-201ENST00000253458 FRAT2O75474 233 aaPredicted RBP16.55■□□□□ 0.24
GSE1-201ENST00000253458 SLC4A10Q6U841 1118 aa16.54■□□□□ 0.24
GSE1-201ENST00000253458 HSP90B1P14625 803 aaKnown RBP16.54■□□□□ 0.24
GSE1-201ENST00000253458 GTF2E1P29083 439 aaPredicted RBP16.54■□□□□ 0.24
GSE1-201ENST00000253458 FOXD4L1Q9NU39 408 aa16.53■□□□□ 0.24
GSE1-201ENST00000253458 SAMD1Q6SPF0 538 aaPredicted RBP16.52■□□□□ 0.24
GSE1-201ENST00000253458 TOMM22Q9NS69 142 aa16.51■□□□□ 0.23
GSE1-201ENST00000253458 MEX3CQ5U5Q3 659 aaKnown RBP16.51■□□□□ 0.23
GSE1-201ENST00000253458 SYTL4Q96C24 671 aaPredicted RBP16.51■□□□□ 0.23
GSE1-201ENST00000253458 FBXW7Q969H0 707 aa16.5■□□□□ 0.23
GSE1-201ENST00000253458 RSF1Q96T23 1441 aaPredicted RBP16.5■□□□□ 0.23
GSE1-201ENST00000253458 CCDC146Q8IYE0 955 aa16.49■□□□□ 0.23
GSE1-201ENST00000253458 FOXD4L5Q5VV16 416 aaPredicted RBP16.49■□□□□ 0.23
GSE1-201ENST00000253458 FOXD4L4Q8WXT5 416 aaPredicted RBP16.49■□□□□ 0.23
GSE1-201ENST00000253458 GZF1Q9H116 711 aaPredicted RBP16.49■□□□□ 0.23
GSE1-201ENST00000253458 U2AF1L5P0DN76 240 aaPredicted RBP16.49■□□□□ 0.23
GSE1-201ENST00000253458 U2AF1Q01081 240 aaKnown RBP eCLIP16.49■□□□□ 0.233e-7■□□□□ 9.6
GSE1-201ENST00000253458 TMF1P82094 1093 aa16.49■□□□□ 0.23
GSE1-201ENST00000253458 NGDNQ8NEJ9 315 aaKnown RBP16.48■□□□□ 0.23
GSE1-201ENST00000253458 ITPRIPQ8IWB1 547 aa16.47■□□□□ 0.23
GSE1-201ENST00000253458 HDGFP51858 240 aaKnown RBP16.46■□□□□ 0.23
GSE1-201ENST00000253458 KANK1Q14678 1352 aa16.46■□□□□ 0.23
GSE1-201ENST00000253458 TNNT3P45378 269 aaPredicted RBP16.46■□□□□ 0.23
GSE1-201ENST00000253458 EVA1CP58658 441 aa16.46■□□□□ 0.23
GSE1-201ENST00000253458 TRIM6-TRIM34B2RNG4 842 aa16.46■□□□□ 0.22
GSE1-201ENST00000253458 CCNB3Q8WWL7 1395 aa16.45■□□□□ 0.22
GSE1-201ENST00000253458 HDGFL2Q7Z4V5 671 aaPredicted RBP16.44■□□□□ 0.22
GSE1-201ENST00000253458 NECTIN2Q92692 538 aa16.44■□□□□ 0.22
GSE1-201ENST00000253458 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.44■□□□□ 0.22
GSE1-201ENST00000253458 APPP05067 770 aa16.44■□□□□ 0.22
GSE1-201ENST00000253458 A0A0U1RQG5 324 aaPredicted RBP16.43■□□□□ 0.22
GSE1-201ENST00000253458 GOLGA6L6A8MZA4 724 aa16.43■□□□□ 0.22
GSE1-201ENST00000253458 CLUAP1Q96AJ1 413 aa16.43■□□□□ 0.22
GSE1-201ENST00000253458 RASSF8Q8NHQ8 419 aa16.42■□□□□ 0.22
GSE1-201ENST00000253458 KIAA1211Q6ZU35 1233 aa16.42■□□□□ 0.22
GSE1-201ENST00000253458 HSCBQ8IWL3 235 aa16.42■□□□□ 0.22
GSE1-201ENST00000253458 PNNQ9H307 717 aaKnown RBP16.42■□□□□ 0.22
GSE1-201ENST00000253458 FOXD4L6Q3SYB3 417 aaPredicted RBP16.41■□□□□ 0.22
GSE1-201ENST00000253458 FOXD4L3Q6VB84 417 aaPredicted RBP16.41■□□□□ 0.22
GSE1-201ENST00000253458 ELL2O00472 640 aaPredicted RBP16.41■□□□□ 0.22
GSE1-201ENST00000253458 PPP1R1BQ9UD71 204 aaPredicted RBP16.41■□□□□ 0.22
GSE1-201ENST00000253458 AMPHP49418 695 aa16.4■□□□□ 0.22
GSE1-201ENST00000253458 ZNF428Q96B54 188 aa16.4■□□□□ 0.22
GSE1-201ENST00000253458 CYB5RLQ6IPT4 315 aa16.4■□□□□ 0.22
GSE1-201ENST00000253458 PKD2Q13563 968 aa16.39■□□□□ 0.21
GSE1-201ENST00000253458 RRP7AQ9Y3A4 280 aaKnown RBP16.39■□□□□ 0.21
GSE1-201ENST00000253458 HNRNPMP52272 730 aaKnown RBP eCLIP16.38■□□□□ 0.212e-6■■■□□ 16.3
GSE1-201ENST00000253458 KIF3BO15066 747 aa16.38■□□□□ 0.21
GSE1-201ENST00000253458 MCCP23508 829 aa16.38■□□□□ 0.21
GSE1-201ENST00000253458 CEP162Q5TB80 1403 aa16.37■□□□□ 0.21
GSE1-201ENST00000253458 SLKQ9H2G2 1235 aaPredicted RBP16.37■□□□□ 0.21
GSE1-201ENST00000253458 MARCH6O60337 910 aa16.36■□□□□ 0.21
GSE1-201ENST00000253458 TRAK1Q9UPV9 953 aa16.35■□□□□ 0.21
GSE1-201ENST00000253458 BAZ1BQ9UIG0 1483 aaKnown RBP16.34■□□□□ 0.21
GSE1-201ENST00000253458 PES1O00541 588 aaKnown RBP16.34■□□□□ 0.21
GSE1-201ENST00000253458 MFAP1P55081 439 aaKnown RBP16.33■□□□□ 0.21
GSE1-201ENST00000253458 EID1Q9Y6B2 187 aa16.33■□□□□ 0.21
GSE1-201ENST00000253458 KIAA2012Q0VF49 1180 aa16.32■□□□□ 0.2
GSE1-201ENST00000253458 L1TD1Q5T7N2 865 aaKnown RBP16.31■□□□□ 0.2
GSE1-201ENST00000253458 TCERG1O14776 1098 aaKnown RBP16.31■□□□□ 0.2
GSE1-201ENST00000253458 HSPA5P11021 654 aaKnown RBP16.31■□□□□ 0.2
GSE1-201ENST00000253458 CNKSR2Q8WXI2 1034 aa16.31■□□□□ 0.2
GSE1-201ENST00000253458 NUTM2GQ5VZR2 741 aa16.3■□□□□ 0.2
GSE1-201ENST00000253458 MYO15BQ96JP2 1530 aa16.3■□□□□ 0.2
GSE1-201ENST00000253458 KDM4AO75164 1064 aa16.3■□□□□ 0.2
GSE1-201ENST00000253458 EIF2S2P20042 333 aaKnown RBP16.3■□□□□ 0.2
GSE1-201ENST00000253458 BCL2L13Q9BXK5 485 aa16.3■□□□□ 0.2
GSE1-201ENST00000253458 USP35Q9P2H5 1018 aa16.3■□□□□ 0.2
GSE1-201ENST00000253458 STK31Q9BXU1 1019 aa16.29■□□□□ 0.2
GSE1-201ENST00000253458 PTMSP20962 102 aa16.29■□□□□ 0.2
GSE1-201ENST00000253458 ROCK2O75116 1388 aaKnown RBP16.29■□□□□ 0.2
GSE1-201ENST00000253458 WASHC2CQ9Y4E1 1318 aa16.29■□□□□ 0.2
GSE1-201ENST00000253458 SMC4Q9NTJ3 1288 aa16.28■□□□□ 0.2
GSE1-201ENST00000253458 NRDCO43847 1150 aa16.28■□□□□ 0.2
GSE1-201ENST00000253458 MTMR7Q9Y216 660 aa16.28■□□□□ 0.2
GSE1-201ENST00000253458 GOLGA3Q08378 1498 aa16.27■□□□□ 0.2
GSE1-201ENST00000253458 NOP58Q9Y2X3 529 aaKnown RBP16.27■□□□□ 0.2
GSE1-201ENST00000253458 FAM177BA6PVY3 158 aa16.27■□□□□ 0.19
GSE1-201ENST00000253458 ANP32EQ9BTT0 268 aa16.27■□□□□ 0.19
GSE1-201ENST00000253458 SPAG9O60271 1321 aaKnown RBP16.27■□□□□ 0.19
GSE1-201ENST00000253458 PPP4R2Q9NY27 417 aa16.26■□□□□ 0.19
GSE1-201ENST00000253458 KIF27Q86VH2 1401 aa16.25■□□□□ 0.19
GSE1-201ENST00000253458 MSNP26038 577 aaKnown RBP16.25■□□□□ 0.19
GSE1-201ENST00000253458 CWC22Q9HCG8 908 aaKnown RBP16.25■□□□□ 0.19
GSE1-201ENST00000253458 FOSBP53539 338 aa16.24■□□□□ 0.19
GSE1-201ENST00000253458 RILPL2Q969X0 211 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms