RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 GPATCH8Q9UKJ3 1502 aaKnown RBP24.36■■□□□ 1.49
FOXA1-201ENST00000250448 KCNH8Q96L42 1107 aa24.36■■□□□ 1.49
FOXA1-201ENST00000250448 RRP7BPQ9NSQ0 103 aa24.36■■□□□ 1.49
FOXA1-201ENST00000250448 ADCY10Q96PN6 1610 aa24.35■■□□□ 1.49
FOXA1-201ENST00000250448 SUPT16HQ9Y5B9 1047 aaKnown RBP24.34■■□□□ 1.49
FOXA1-201ENST00000250448 ABCC10Q5T3U5 1492 aa24.31■■□□□ 1.48
FOXA1-201ENST00000250448 MAPKBP1O60336 1514 aa24.3■■□□□ 1.48
FOXA1-201ENST00000250448 ZCCHC11Q5TAX3 1644 aaKnown RBP24.29■■□□□ 1.48
FOXA1-201ENST00000250448 CDC42BPAQ5VT25 1732 aa24.27■■□□□ 1.48
FOXA1-201ENST00000250448 CAMSAP2Q08AD1 1489 aa24.27■■□□□ 1.48
FOXA1-201ENST00000250448 ITSN2Q9NZM3 1697 aa24.26■■□□□ 1.47
FOXA1-201ENST00000250448 NAIPQ13075 1403 aa24.25■■□□□ 1.47
FOXA1-201ENST00000250448 UHRF1BP1LA0JNW5 1464 aa24.25■■□□□ 1.47
FOXA1-201ENST00000250448 HFM1A2PYH4 1435 aa24.25■■□□□ 1.47
FOXA1-201ENST00000250448 DAPK1P53355 1430 aa24.24■■□□□ 1.47
FOXA1-201ENST00000250448 ABCC5O15440 1437 aa24.24■■□□□ 1.47
FOXA1-201ENST00000250448 KDM5BQ9UGL1 1544 aa24.23■■□□□ 1.47
FOXA1-201ENST00000250448 TTC37Q6PGP7 1564 aa24.21■■□□□ 1.47
FOXA1-201ENST00000250448 BCL11AQ9H165 835 aa24.19■■□□□ 1.46
FOXA1-201ENST00000250448 DNMT1P26358 1616 aaKnown RBP24.19■■□□□ 1.46
FOXA1-201ENST00000250448 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.19■■□□□ 1.46
FOXA1-201ENST00000250448 HNRNPMP52272 730 aaKnown RBP eCLIP24.17■■□□□ 1.46
FOXA1-201ENST00000250448 KDM6BO15054 1643 aa24.16■■□□□ 1.46
FOXA1-201ENST00000250448 CDC42BPBQ9Y5S2 1711 aa24.14■■□□□ 1.46
FOXA1-201ENST00000250448 ARHGAP5Q13017 1502 aa24.11■■□□□ 1.45
FOXA1-201ENST00000250448 TRIM52Q96A61 297 aa24.11■■□□□ 1.45
FOXA1-201ENST00000250448 PREX2Q70Z35 1606 aa24.1■■□□□ 1.45
FOXA1-201ENST00000250448 SIN3AQ96ST3 1273 aa24.1■■□□□ 1.45
FOXA1-201ENST00000250448 AKNAQ7Z591 1439 aa24.09■■□□□ 1.45
FOXA1-201ENST00000250448 GCC2Q8IWJ2 1684 aa24.08■■□□□ 1.45
FOXA1-201ENST00000250448 SAMD9LQ8IVG5 1584 aa24.08■■□□□ 1.45
FOXA1-201ENST00000250448 CYB5RLQ6IPT4 315 aa24.06■■□□□ 1.44
FOXA1-201ENST00000250448 WDR7Q9Y4E6 1490 aa24.05■■□□□ 1.44
FOXA1-201ENST00000250448 NPM1P06748 294 aaKnown RBP eCLIP24.05■■□□□ 1.44
FOXA1-201ENST00000250448 ASXL2Q76L83 1435 aa24.05■■□□□ 1.44
FOXA1-201ENST00000250448 MYO5CQ9NQX4 1742 aa24.05■■□□□ 1.44
FOXA1-201ENST00000250448 ROCK1Q13464 1354 aa24.04■■□□□ 1.44
FOXA1-201ENST00000250448 TSHZ2Q9NRE2 1034 aa24.04■■□□□ 1.44
FOXA1-201ENST00000250448 NCOA1Q15788 1441 aa24.03■■□□□ 1.44
FOXA1-201ENST00000250448 CROCC2H7BZ55 1655 aa24.02■■□□□ 1.44
FOXA1-201ENST00000250448 SYCP2Q9BX26 1530 aa24.02■■□□□ 1.44
FOXA1-201ENST00000250448 MBD5Q9P267 1494 aa24.02■■□□□ 1.44
FOXA1-201ENST00000250448 TSPY4P0CV99 314 aa24.01■■□□□ 1.43
FOXA1-201ENST00000250448 TSPY10P0CW01 314 aa24.01■■□□□ 1.43
FOXA1-201ENST00000250448 C9orf84Q5VXU9 1444 aa24.01■■□□□ 1.43
FOXA1-201ENST00000250448 PLCH2O75038 1416 aa23.99■■□□□ 1.43
FOXA1-201ENST00000250448 FOXD1Q16676 465 aa23.97■■□□□ 1.43
FOXA1-201ENST00000250448 ANKRD30AQ9BXX3 1397 aa23.97■■□□□ 1.43
FOXA1-201ENST00000250448 DDX10Q13206 875 aaKnown RBP23.97■■□□□ 1.43
FOXA1-201ENST00000250448 ADGBQ8N7X0 1667 aa23.96■■□□□ 1.43
FOXA1-201ENST00000250448 EFCAB2Q5VUJ9 269 aa23.96■■□□□ 1.43
FOXA1-201ENST00000250448 TIMELESSQ9UNS1 1208 aa23.96■■□□□ 1.43
FOXA1-201ENST00000250448 ARHGEF12Q9NZN5 1544 aa23.95■■□□□ 1.42
FOXA1-201ENST00000250448 CCDC141Q6ZP82 1450 aa23.94■■□□□ 1.42
FOXA1-201ENST00000250448 RIMBP3CA6NJZ7 1639 aa23.94■■□□□ 1.42
FOXA1-201ENST00000250448 RIMBP3BA6NNM3 1639 aa23.94■■□□□ 1.42
FOXA1-201ENST00000250448 RIMBP3Q9UFD9 1639 aa23.94■■□□□ 1.42
FOXA1-201ENST00000250448 ADGRL2O95490 1459 aa23.94■■□□□ 1.42
FOXA1-201ENST00000250448 MPHOSPH9Q99550 1183 aa23.93■■□□□ 1.42
FOXA1-201ENST00000250448 ARHGEF5Q12774 1597 aa23.92■■□□□ 1.42
FOXA1-201ENST00000250448 DENND4BO75064 1496 aaPredicted RBP23.92■■□□□ 1.42
FOXA1-201ENST00000250448 PPP1R15AO75807 674 aaPredicted RBP23.92■■□□□ 1.42
FOXA1-201ENST00000250448 SHANK2Q9UPX8 1470 aa23.9■■□□□ 1.42
FOXA1-201ENST00000250448 KIF15Q9NS87 1388 aa23.89■■□□□ 1.42
FOXA1-201ENST00000250448 ANKRD50Q9ULJ7 1429 aa23.89■■□□□ 1.41
FOXA1-201ENST00000250448 ERICH6Q7L0X2 663 aa23.89■■□□□ 1.41
FOXA1-201ENST00000250448 TRAPPC8Q9Y2L5 1435 aa23.87■■□□□ 1.41
FOXA1-201ENST00000250448 AFAP1Q8N556 730 aa23.86■■□□□ 1.41
FOXA1-201ENST00000250448 ABCA9Q8IUA7 1624 aa23.86■■□□□ 1.41
FOXA1-201ENST00000250448 SLC4A1APQ9BWU0 796 aaKnown RBP23.86■■□□□ 1.41
FOXA1-201ENST00000250448 KIAA1107Q9UPP5 1409 aa23.85■■□□□ 1.41
FOXA1-201ENST00000250448 RSPH4AQ5TD94 716 aa23.85■■□□□ 1.41
FOXA1-201ENST00000250448 FANCAO15360 1455 aa23.84■■□□□ 1.41
FOXA1-201ENST00000250448 ABCC1P33527 1531 aa23.84■■□□□ 1.41
FOXA1-201ENST00000250448 PLEKHH2Q8IVE3 1493 aa23.83■■□□□ 1.41
FOXA1-201ENST00000250448 FKBP8Q14318 412 aa23.83■■□□□ 1.41
FOXA1-201ENST00000250448 BCANQ96GW7 911 aa23.83■■□□□ 1.41
FOXA1-201ENST00000250448 CCER2I3L3R5 266 aa23.82■■□□□ 1.4
FOXA1-201ENST00000250448 PZPP20742 1482 aa23.78■■□□□ 1.4
FOXA1-201ENST00000250448 HIRIP3Q9BW71 556 aaPredicted RBP23.77■■□□□ 1.4
FOXA1-201ENST00000250448 NUP155O75694 1391 aa23.77■■□□□ 1.4
FOXA1-201ENST00000250448 CD109Q6YHK3 1445 aa23.77■■□□□ 1.4
FOXA1-201ENST00000250448 ANP32CO43423 234 aa23.77■■□□□ 1.4
FOXA1-201ENST00000250448 MYT1LQ9UL68 1186 aa23.76■■□□□ 1.39
FOXA1-201ENST00000250448 ARAP3Q8WWN8 1544 aa23.76■■□□□ 1.39
FOXA1-201ENST00000250448 TONSLQ96HA7 1378 aa23.75■■□□□ 1.39
FOXA1-201ENST00000250448 SCAPERQ9BY12 1400 aa23.75■■□□□ 1.39
FOXA1-201ENST00000250448 ADGRL1O94910 1474 aa23.75■■□□□ 1.39
FOXA1-201ENST00000250448 ANP32EQ9BTT0 268 aa23.75■■□□□ 1.39
FOXA1-201ENST00000250448 SPAG9O60271 1321 aaKnown RBP23.74■■□□□ 1.39
FOXA1-201ENST00000250448 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.74■■□□□ 1.393e-7■□□□□ 8.7
FOXA1-201ENST00000250448 NEFLP07196 543 aa23.74■■□□□ 1.39
FOXA1-201ENST00000250448 PKD2Q13563 968 aa23.73■■□□□ 1.39
FOXA1-201ENST00000250448 MAST1Q9Y2H9 1570 aa23.73■■□□□ 1.39
FOXA1-201ENST00000250448 ANKRD30BQ9BXX2 1392 aa23.69■■□□□ 1.38
FOXA1-201ENST00000250448 PLXNC1O60486 1568 aa23.66■■□□□ 1.38
FOXA1-201ENST00000250448 ZFYVE16Q7Z3T8 1539 aa23.64■■□□□ 1.38
FOXA1-201ENST00000250448 FAM69CQ0P6D2 419 aa23.64■■□□□ 1.37
FOXA1-201ENST00000250448 SLC24A1O60721 1099 aa23.63■■□□□ 1.37
FOXA1-201ENST00000250448 DUOX2Q9NRD8 1548 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms