RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 PRG4Q92954 1404 aaPredicted RBP31.36■■■□□ 2.61
RNF39-201ENST00000244360 ABCA8O94911 1581 aa31.34■■■□□ 2.61
RNF39-201ENST00000244360 ITSN2Q9NZM3 1697 aa31.34■■■□□ 2.61
RNF39-201ENST00000244360 KDM5BQ9UGL1 1544 aa31.33■■■□□ 2.61
RNF39-201ENST00000244360 GPATCH8Q9UKJ3 1502 aaKnown RBP31.28■■■□□ 2.6
RNF39-201ENST00000244360 KIF14Q15058 1648 aa31.27■■■□□ 2.6
RNF39-201ENST00000244360 ZNF644Q9H582 1327 aaPredicted RBP31.26■■■□□ 2.59
RNF39-201ENST00000244360 CAMSAP2Q08AD1 1489 aa31.26■■■□□ 2.59
RNF39-201ENST00000244360 TRIM52Q96A61 297 aa31.21■■■□□ 2.59
RNF39-201ENST00000244360 MPHOSPH9Q99550 1183 aa31.2■■■□□ 2.58
RNF39-201ENST00000244360 ATP10BO94823 1461 aa31.18■■■□□ 2.58
RNF39-201ENST00000244360 CFDP1Q9UEE9 299 aaPredicted RBP31.17■■■□□ 2.58
RNF39-201ENST00000244360 ADGBQ8N7X0 1667 aa31.16■■■□□ 2.58
RNF39-201ENST00000244360 CROCC2H7BZ55 1655 aa31.16■■■□□ 2.58
RNF39-201ENST00000244360 ADGRL2O95490 1459 aa31.16■■■□□ 2.58
RNF39-201ENST00000244360 ABCC10Q5T3U5 1492 aa31.15■■■□□ 2.58
RNF39-201ENST00000244360 DDX10Q13206 875 aaKnown RBP31.1■■■□□ 2.57
RNF39-201ENST00000244360 NCOA1Q15788 1441 aa31.1■■■□□ 2.57
RNF39-201ENST00000244360 CHD1O14646 1710 aa31.09■■■□□ 2.57
RNF39-201ENST00000244360 CDC42BPAQ5VT25 1732 aa31.09■■■□□ 2.57
RNF39-201ENST00000244360 PLEKHD1A6NEE1 506 aa31.08■■■□□ 2.57
RNF39-201ENST00000244360 ANKRD30BQ9BXX2 1392 aa31.07■■■□□ 2.56
RNF39-201ENST00000244360 PTPRGP23470 1445 aa31.06■■■□□ 2.56
RNF39-201ENST00000244360 SHROOM2Q13796 1616 aa31.05■■■□□ 2.56
RNF39-201ENST00000244360 RPRD2Q5VT52 1461 aaKnown RBP31.03■■■□□ 2.56
RNF39-201ENST00000244360 SHANK2Q9UPX8 1470 aa31.02■■■□□ 2.56
RNF39-201ENST00000244360 HIRIP3Q9BW71 556 aaPredicted RBP31.02■■■□□ 2.56
RNF39-201ENST00000244360 PZPP20742 1482 aa31.01■■■□□ 2.55
RNF39-201ENST00000244360 ANKRD30AQ9BXX3 1397 aa30.97■■■□□ 2.55
RNF39-201ENST00000244360 ZNF777Q9ULD5 760 aaPredicted RBP30.96■■■□□ 2.55
RNF39-201ENST00000244360 TEX14Q8IWB6 1497 aa30.95■■■□□ 2.55
RNF39-201ENST00000244360 FOXD1Q16676 465 aa30.95■■■□□ 2.55
RNF39-201ENST00000244360 SLC4A1APQ9BWU0 796 aaKnown RBP30.93■■■□□ 2.54
RNF39-201ENST00000244360 L3MBTL2Q969R5 705 aa30.93■■■□□ 2.54
RNF39-201ENST00000244360 ARHGEF5Q12774 1597 aa30.91■■■□□ 2.54
RNF39-201ENST00000244360 KCNH8Q96L42 1107 aa30.89■■■□□ 2.54
RNF39-201ENST00000244360 C9orf84Q5VXU9 1444 aa30.89■■■□□ 2.54
RNF39-201ENST00000244360 MYT1Q01538 1121 aa30.88■■■□□ 2.53
RNF39-201ENST00000244360 ANKRD50Q9ULJ7 1429 aa30.88■■■□□ 2.53
RNF39-201ENST00000244360 CCER2I3L3R5 266 aa30.87■■■□□ 2.53
RNF39-201ENST00000244360 PREX2Q70Z35 1606 aa30.86■■■□□ 2.53
RNF39-201ENST00000244360 KIAA1107Q9UPP5 1409 aa30.85■■■□□ 2.53
RNF39-201ENST00000244360 MBD5Q9P267 1494 aa30.83■■■□□ 2.53
RNF39-201ENST00000244360 HSPA5P11021 654 aaKnown RBP30.83■■■□□ 2.53
RNF39-201ENST00000244360 ANP32CO43423 234 aa30.82■■■□□ 2.52
RNF39-201ENST00000244360 SUPT16HQ9Y5B9 1047 aaKnown RBP30.82■■■□□ 2.52
RNF39-201ENST00000244360 KDM5DQ9BY66 1539 aa30.81■■■□□ 2.52
RNF39-201ENST00000244360 CDC42BPBQ9Y5S2 1711 aa30.8■■■□□ 2.52
RNF39-201ENST00000244360 SAMD9LQ8IVG5 1584 aa30.8■■■□□ 2.52
RNF39-201ENST00000244360 ABCC2Q92887 1545 aa30.8■■■□□ 2.52
RNF39-201ENST00000244360 EIF4G2P78344 907 aaKnown RBP eCLIP30.79■■■□□ 2.52
RNF39-201ENST00000244360 ERCC6L2Q5T890 1561 aa30.78■■■□□ 2.52
RNF39-201ENST00000244360 CCDC141Q6ZP82 1450 aa30.76■■■□□ 2.51
RNF39-201ENST00000244360 CLASP1Q7Z460 1538 aa30.75■■■□□ 2.51
RNF39-201ENST00000244360 WASHC2AQ641Q2 1341 aa30.75■■■□□ 2.51
RNF39-201ENST00000244360 NBPF8Q3BBV2 869 aa30.74■■■□□ 2.51
RNF39-201ENST00000244360 TSPY4P0CV99 314 aa30.73■■■□□ 2.51
RNF39-201ENST00000244360 TSPY10P0CW01 314 aa30.73■■■□□ 2.51
RNF39-201ENST00000244360 TTC37Q6PGP7 1564 aa30.71■■■□□ 2.51
RNF39-201ENST00000244360 KIF15Q9NS87 1388 aa30.71■■■□□ 2.51
RNF39-201ENST00000244360 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.7■■■□□ 2.51
RNF39-201ENST00000244360 PKD2Q13563 968 aa30.7■■■□□ 2.5
RNF39-201ENST00000244360 RSPH4AQ5TD94 716 aa30.69■■■□□ 2.5
RNF39-201ENST00000244360 HNRNPMP52272 730 aaKnown RBP eCLIP30.69■■■□□ 2.5
RNF39-201ENST00000244360 SPATA31E1Q6ZUB1 1445 aa30.68■■■□□ 2.5
RNF39-201ENST00000244360 MAST1Q9Y2H9 1570 aa30.67■■■□□ 2.5
RNF39-201ENST00000244360 NUP155O75694 1391 aa30.66■■■□□ 2.5
RNF39-201ENST00000244360 UHRF1BP1LA0JNW5 1464 aa30.64■■■□□ 2.49
RNF39-201ENST00000244360 ARHGAP5Q13017 1502 aa30.62■■■□□ 2.49
RNF39-201ENST00000244360 SYCP2Q9BX26 1530 aa30.62■■■□□ 2.49
RNF39-201ENST00000244360 CNTLNQ9NXG0 1405 aa30.61■■■□□ 2.49
RNF39-201ENST00000244360 MYO5CQ9NQX4 1742 aa30.61■■■□□ 2.49
RNF39-201ENST00000244360 CCDC7Q96M83 1385 aa30.61■■■□□ 2.49
RNF39-201ENST00000244360 PLEKHH2Q8IVE3 1493 aa30.59■■■□□ 2.49
RNF39-201ENST00000244360 POLR1AO95602 1720 aaPredicted RBP30.59■■■□□ 2.49
RNF39-201ENST00000244360 ARHGEF12Q9NZN5 1544 aa30.57■■■□□ 2.48
RNF39-201ENST00000244360 ZCCHC11Q5TAX3 1644 aaKnown RBP30.56■■■□□ 2.48
RNF39-201ENST00000244360 UHRF1BP1Q6BDS2 1440 aa30.55■■■□□ 2.48
RNF39-201ENST00000244360 C11orf95C9JLR9 678 aaPredicted RBP30.54■■■□□ 2.48
RNF39-201ENST00000244360 PLXNC1O60486 1568 aa30.54■■■□□ 2.48
RNF39-201ENST00000244360 UNC13BO14795 1591 aa30.51■■■□□ 2.48
RNF39-201ENST00000244360 FAM135AQ9P2D6 1515 aa30.51■■■□□ 2.48
RNF39-201ENST00000244360 PLCH2O75038 1416 aa30.48■■■□□ 2.47
RNF39-201ENST00000244360 RALGAPBQ86X10 1494 aa30.46■■■□□ 2.47
RNF39-201ENST00000244360 KIF7Q2M1P5 1343 aa30.44■■■□□ 2.46
RNF39-201ENST00000244360 KDM5CP41229 1560 aa30.44■■■□□ 2.46
RNF39-201ENST00000244360 USP47Q96K76 1375 aa30.42■■■□□ 2.46
RNF39-201ENST00000244360 ABCC1P33527 1531 aa30.39■■■□□ 2.46
RNF39-201ENST00000244360 DUOX2Q9NRD8 1548 aa30.39■■■□□ 2.46
RNF39-201ENST00000244360 IQGAP3Q86VI3 1631 aa30.38■■■□□ 2.45
RNF39-201ENST00000244360 ARAP3Q8WWN8 1544 aa30.37■■■□□ 2.45
RNF39-201ENST00000244360 MAGI2Q86UL8 1455 aa30.37■■■□□ 2.45
RNF39-201ENST00000244360 BCORL1Q5H9F3 1711 aa30.36■■■□□ 2.45
RNF39-201ENST00000244360 ERBINQ96RT1 1412 aa30.35■■■□□ 2.45
RNF39-201ENST00000244360 EFCAB2Q5VUJ9 269 aa30.34■■■□□ 2.45
RNF39-201ENST00000244360 PRKRIP1Q9H875 184 aaPredicted RBP30.33■■■□□ 2.45
RNF39-201ENST00000244360 ARID4BQ4LE39 1312 aaPredicted RBP30.33■■■□□ 2.45
RNF39-201ENST00000244360 ZNF326Q5BKZ1 582 aaKnown RBP30.31■■■□□ 2.44
RNF39-201ENST00000244360 PLA2R1Q13018 1463 aa30.3■■■□□ 2.44
RNF39-201ENST00000244360 NEFLP07196 543 aa30.29■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms