RNA–Protein interactions for RNA: ENST00000238961.8

SLF2-201, Transcript of SMC5-SMC6 complex localization factor 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLF2, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2-201ENST00000238961 U2SURPO15042 1029 aaKnown RBP13.01□□□□□ -0.33
SLF2-201ENST00000238961 KNSTRNQ9Y448 316 aa13.01□□□□□ -0.33
SLF2-201ENST00000238961 CWC22Q9HCG8 908 aaKnown RBP13□□□□□ -0.33
SLF2-201ENST00000238961 APBB1O00213 710 aa12.99□□□□□ -0.33
SLF2-201ENST00000238961 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.99□□□□□ -0.33
SLF2-201ENST00000238961 RGL3Q3MIN7 710 aa12.98□□□□□ -0.33
SLF2-201ENST00000238961 CTDP1Q9Y5B0 961 aaPredicted RBP12.98□□□□□ -0.33
SLF2-201ENST00000238961 CHMP3Q9Y3E7 222 aa12.98□□□□□ -0.33
SLF2-201ENST00000238961 ERCC6Q03468 1493 aa12.97□□□□□ -0.33
SLF2-201ENST00000238961 FRAT2O75474 233 aaPredicted RBP12.97□□□□□ -0.33
SLF2-201ENST00000238961 TPD52L1Q16890 204 aaPredicted RBP12.96□□□□□ -0.34
SLF2-201ENST00000238961 KCNH8Q96L42 1107 aa12.96□□□□□ -0.34
SLF2-201ENST00000238961 HIRIP3Q9BW71 556 aaPredicted RBP12.96□□□□□ -0.34
SLF2-201ENST00000238961 MS4A1P11836 297 aa12.95□□□□□ -0.34
SLF2-201ENST00000238961 PTMSP20962 102 aa12.95□□□□□ -0.34
SLF2-201ENST00000238961 CSB-PGBD3P0DP91 1061 aa12.95□□□□□ -0.34
SLF2-201ENST00000238961 TOMM22Q9NS69 142 aa12.95□□□□□ -0.34
SLF2-201ENST00000238961 TSR1Q2NL82 804 aaKnown RBP12.94□□□□□ -0.34
SLF2-201ENST00000238961 PAF1Q8N7H5 531 aa12.94□□□□□ -0.34
SLF2-201ENST00000238961 VSIG10Q8N0Z9 540 aa12.94□□□□□ -0.34
SLF2-201ENST00000238961 RTF1Q92541 710 aaKnown RBP12.94□□□□□ -0.34
SLF2-201ENST00000238961 CCAR2Q8N163 923 aaKnown RBP12.94□□□□□ -0.34
SLF2-201ENST00000238961 RAD21O60216 631 aa12.93□□□□□ -0.34
SLF2-201ENST00000238961 CHMP7Q8WUX9 453 aaPredicted RBP12.93□□□□□ -0.34
SLF2-201ENST00000238961 APPP05067 770 aa12.93□□□□□ -0.34
SLF2-201ENST00000238961 TRHP20396 242 aaPredicted RBP12.93□□□□□ -0.34
SLF2-201ENST00000238961 CDCA8Q53HL2 280 aa12.93□□□□□ -0.34
SLF2-201ENST00000238961 NACADO15069 1562 aa12.91□□□□□ -0.34
SLF2-201ENST00000238961 GTF2E1P29083 439 aaPredicted RBP12.9□□□□□ -0.34
SLF2-201ENST00000238961 TPM2P07951 284 aa12.9□□□□□ -0.34
SLF2-201ENST00000238961 CCDC70Q6NSX1 233 aa12.9□□□□□ -0.34
SLF2-201ENST00000238961 MSH5O43196 834 aa12.9□□□□□ -0.35
SLF2-201ENST00000238961 DCAF8L1A6NGE4 600 aa12.89□□□□□ -0.35
SLF2-201ENST00000238961 SYAP1Q96A49 352 aaPredicted RBP12.89□□□□□ -0.35
SLF2-201ENST00000238961 TRIM34Q9BYJ4 488 aa12.89□□□□□ -0.35
SLF2-201ENST00000238961 CFAP44Q96MT7 982 aa12.88□□□□□ -0.35
SLF2-201ENST00000238961 GZF1Q9H116 711 aaPredicted RBP12.87□□□□□ -0.35
SLF2-201ENST00000238961 PAK3O75914 559 aaPredicted RBP12.87□□□□□ -0.35
SLF2-201ENST00000238961 PCMTD1Q96MG8 357 aaPredicted RBP12.86□□□□□ -0.35
SLF2-201ENST00000238961 ODF2Q5BJF6 829 aa12.86□□□□□ -0.35
SLF2-201ENST00000238961 NOP58Q9Y2X3 529 aaKnown RBP12.86□□□□□ -0.35
SLF2-201ENST00000238961 SF3A1Q15459 793 aaKnown RBP12.85□□□□□ -0.35
SLF2-201ENST00000238961 KLHL34Q8N239 644 aa12.85□□□□□ -0.35
SLF2-201ENST00000238961 GBP4Q96PP9 640 aa12.85□□□□□ -0.35
SLF2-201ENST00000238961 GPATCH3Q96I76 525 aa12.84□□□□□ -0.35
SLF2-201ENST00000238961 PPP4R2Q9NY27 417 aa12.84□□□□□ -0.35
SLF2-201ENST00000238961 AK7Q96M32 723 aa12.84□□□□□ -0.35
SLF2-201ENST00000238961 HMMRO75330 724 aa12.83□□□□□ -0.36
SLF2-201ENST00000238961 CT47A1Q5JQC4 288 aaPredicted RBP12.83□□□□□ -0.36
SLF2-201ENST00000238961 TPM1P09493 284 aa12.83□□□□□ -0.36
SLF2-201ENST00000238961 GPS2Q13227 327 aa12.83□□□□□ -0.36
SLF2-201ENST00000238961 CCDC43Q96MW1 224 aaKnown RBP12.83□□□□□ -0.36
SLF2-201ENST00000238961 R3HCC1Q9Y3T6 440 aaKnown RBP12.82□□□□□ -0.36
SLF2-201ENST00000238961 CSPP1Q1MSJ5 1256 aa12.82□□□□□ -0.36
SLF2-201ENST00000238961 TRIM6-TRIM34B2RNG4 842 aa12.81□□□□□ -0.36
SLF2-201ENST00000238961 CC2D1BQ5T0F9 858 aaKnown RBP12.81□□□□□ -0.36
SLF2-201ENST00000238961 ZFYVE27Q5T4F4 411 aa12.81□□□□□ -0.36
SLF2-201ENST00000238961 AKAP17AQ02040 695 aaKnown RBP12.8□□□□□ -0.36
SLF2-201ENST00000238961 SAMD1Q6SPF0 538 aaPredicted RBP12.8□□□□□ -0.36
SLF2-201ENST00000238961 NOL8Q76FK4 1167 aaKnown RBP12.8□□□□□ -0.36
SLF2-201ENST00000238961 SUPT16HQ9Y5B9 1047 aaKnown RBP12.8□□□□□ -0.36
SLF2-201ENST00000238961 CCDC97Q96F63 343 aaPredicted RBP12.8□□□□□ -0.36
SLF2-201ENST00000238961 MLECQ14165 292 aa12.8□□□□□ -0.36
SLF2-201ENST00000238961 MAP7D2Q96T17 732 aa12.79□□□□□ -0.36
SLF2-201ENST00000238961 PPM1FP49593 454 aaPredicted RBP12.79□□□□□ -0.36
SLF2-201ENST00000238961 FBXW7Q969H0 707 aa12.78□□□□□ -0.36
SLF2-201ENST00000238961 B4GALNT3Q6L9W6 998 aa12.78□□□□□ -0.36
SLF2-201ENST00000238961 PHF23Q9BUL5 403 aaPredicted RBP12.78□□□□□ -0.36
SLF2-201ENST00000238961 SRPK2P78362 688 aaKnown RBP12.77□□□□□ -0.36
SLF2-201ENST00000238961 BAZ1BQ9UIG0 1483 aaKnown RBP12.77□□□□□ -0.36
SLF2-201ENST00000238961 RRP7BPQ9NSQ0 103 aa12.77□□□□□ -0.36
SLF2-201ENST00000238961 NOL10Q9BSC4 688 aaKnown RBP12.77□□□□□ -0.37
SLF2-201ENST00000238961 PLCD4Q9BRC7 762 aa12.76□□□□□ -0.37
SLF2-201ENST00000238961 DHX16O60231 1041 aaKnown RBP12.76□□□□□ -0.37
SLF2-201ENST00000238961 IPO7O95373 1038 aaKnown RBP12.76□□□□□ -0.37
SLF2-201ENST00000238961 AMOTL1Q8IY63 956 aa12.76□□□□□ -0.37
SLF2-201ENST00000238961 CSRNP3Q8WYN3 585 aa12.76□□□□□ -0.37
SLF2-201ENST00000238961 HDGFP51858 240 aaKnown RBP12.76□□□□□ -0.37
SLF2-201ENST00000238961 HSP90AB2PQ58FF8 381 aa12.75□□□□□ -0.37
SLF2-201ENST00000238961 MYO15BQ96JP2 1530 aa12.75□□□□□ -0.37
SLF2-201ENST00000238961 CARD11Q9BXL7 1154 aa12.75□□□□□ -0.37
SLF2-201ENST00000238961 NAP1L1P55209 391 aaKnown RBP12.75□□□□□ -0.37
SLF2-201ENST00000238961 H3BQV1 296 aa12.74□□□□□ -0.37
SLF2-201ENST00000238961 IFFO2Q5TF58 517 aa12.74□□□□□ -0.37
SLF2-201ENST00000238961 CDR1P51861 262 aa12.74□□□□□ -0.37
SLF2-201ENST00000238961 ZNF771Q7L3S4 317 aaPredicted RBP12.74□□□□□ -0.37
SLF2-201ENST00000238961 SAFB2Q14151 953 aaKnown RBP eCLIP12.74□□□□□ -0.37
SLF2-201ENST00000238961 RUFY1Q96T51 708 aa12.74□□□□□ -0.37
SLF2-201ENST00000238961 WWC2Q6AWC2 1192 aa12.74□□□□□ -0.37
SLF2-201ENST00000238961 CCDC47Q96A33 483 aaKnown RBP12.73□□□□□ -0.37
SLF2-201ENST00000238961 CCDC191Q8NCU4 936 aa12.73□□□□□ -0.37
SLF2-201ENST00000238961 TMEM132AQ24JP5 1023 aa12.73□□□□□ -0.37
SLF2-201ENST00000238961 CALD1Q05682 793 aaKnown RBP12.73□□□□□ -0.37
SLF2-201ENST00000238961 KIF3AQ9Y496 699 aa12.73□□□□□ -0.37
SLF2-201ENST00000238961 GOLGA6L19H0YKK7 550 aa12.73□□□□□ -0.37
SLF2-201ENST00000238961 KIF16BQ96L93 1317 aa12.72□□□□□ -0.37
SLF2-201ENST00000238961 FOXD4L5Q5VV16 416 aaPredicted RBP12.72□□□□□ -0.37
SLF2-201ENST00000238961 FOXD4L4Q8WXT5 416 aaPredicted RBP12.72□□□□□ -0.37
SLF2-201ENST00000238961 ZNF592Q92610 1267 aa12.71□□□□□ -0.37
SLF2-201ENST00000238961 MTUS2Q5JR59 1369 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms