RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 CSB-PGBD3P0DP91 1061 aa16.79■□□□□ 0.28
NEK9-201ENST00000238616 RASSF8Q8NHQ8 419 aa16.78■□□□□ 0.28
NEK9-201ENST00000238616 GORABQ5T7V8 394 aa16.77■□□□□ 0.28
NEK9-201ENST00000238616 STK26Q9P289 416 aa16.77■□□□□ 0.28
NEK9-201ENST00000238616 TAF7LQ5H9L4 462 aa16.77■□□□□ 0.28
NEK9-201ENST00000238616 CHMP4BQ9H444 224 aaKnown RBP16.77■□□□□ 0.28
NEK9-201ENST00000238616 CNKSR2Q8WXI2 1034 aa16.76■□□□□ 0.27
NEK9-201ENST00000238616 B4GALNT3Q6L9W6 998 aa16.75■□□□□ 0.27
NEK9-201ENST00000238616 ERCC6Q03468 1493 aa16.74■□□□□ 0.27
NEK9-201ENST00000238616 GZF1Q9H116 711 aaPredicted RBP16.74■□□□□ 0.27
NEK9-201ENST00000238616 ZCCHC6Q5VYS8 1495 aaKnown RBP16.74■□□□□ 0.27
NEK9-201ENST00000238616 FRAT2O75474 233 aaPredicted RBP16.72■□□□□ 0.27
NEK9-201ENST00000238616 CFDP1Q9UEE9 299 aaPredicted RBP16.72■□□□□ 0.27
NEK9-201ENST00000238616 CEP89Q96ST8 783 aa16.72■□□□□ 0.27
NEK9-201ENST00000238616 PES1O00541 588 aaKnown RBP16.71■□□□□ 0.27
NEK9-201ENST00000238616 NOP58Q9Y2X3 529 aaKnown RBP16.7■□□□□ 0.26
NEK9-201ENST00000238616 MS4A1P11836 297 aa16.69■□□□□ 0.26
NEK9-201ENST00000238616 GOLGA6L1Q8N7Z2 621 aa16.69■□□□□ 0.26
NEK9-201ENST00000238616 TRIM6-TRIM34B2RNG4 842 aa16.68■□□□□ 0.26
NEK9-201ENST00000238616 TNNT3P45378 269 aaPredicted RBP16.68■□□□□ 0.26
NEK9-201ENST00000238616 MARCH6O60337 910 aa16.67■□□□□ 0.26
NEK9-201ENST00000238616 RAD21O60216 631 aa16.67■□□□□ 0.26
NEK9-201ENST00000238616 PATL2C9JE40 543 aaKnown RBP16.66■□□□□ 0.26
NEK9-201ENST00000238616 EIF4G1Q04637 1599 aaKnown RBP16.65■□□□□ 0.26
NEK9-201ENST00000238616 TPM4P67936 248 aa16.65■□□□□ 0.26
NEK9-201ENST00000238616 MSH5O43196 834 aa16.65■□□□□ 0.26
NEK9-201ENST00000238616 RSF1Q96T23 1441 aaPredicted RBP16.65■□□□□ 0.26
NEK9-201ENST00000238616 GTF2E1P29083 439 aaPredicted RBP16.64■□□□□ 0.25
NEK9-201ENST00000238616 TCEAL9Q9UHQ7 104 aa16.64■□□□□ 0.25
NEK9-201ENST00000238616 NOL8Q76FK4 1167 aaKnown RBP16.63■□□□□ 0.25
NEK9-201ENST00000238616 MORC1Q86VD1 984 aa16.63■□□□□ 0.25
NEK9-201ENST00000238616 TOMM22Q9NS69 142 aa16.63■□□□□ 0.25
NEK9-201ENST00000238616 GPATCH3Q96I76 525 aa16.63■□□□□ 0.25
NEK9-201ENST00000238616 DCAF11Q8TEB1 546 aa16.62■□□□□ 0.25
NEK9-201ENST00000238616 HDGFP51858 240 aaKnown RBP16.62■□□□□ 0.25
NEK9-201ENST00000238616 KANK1Q14678 1352 aa16.61■□□□□ 0.25
NEK9-201ENST00000238616 ITPRIPQ8IWB1 547 aa16.6■□□□□ 0.25
NEK9-201ENST00000238616 CCDC180Q9P1Z9 1646 aa16.58■□□□□ 0.25
NEK9-201ENST00000238616 KLHL34Q8N239 644 aa16.57■□□□□ 0.24
NEK9-201ENST00000238616 SLC4A10Q6U841 1118 aa16.57■□□□□ 0.24
NEK9-201ENST00000238616 TMF1P82094 1093 aa16.57■□□□□ 0.24
NEK9-201ENST00000238616 TPD52L1Q16890 204 aaPredicted RBP16.57■□□□□ 0.24
NEK9-201ENST00000238616 CLIP1P30622 1438 aa16.56■□□□□ 0.24
NEK9-201ENST00000238616 FOXD4L5Q5VV16 416 aaPredicted RBP16.56■□□□□ 0.24
NEK9-201ENST00000238616 FOXD4L4Q8WXT5 416 aaPredicted RBP16.56■□□□□ 0.24
NEK9-201ENST00000238616 HTATSF1O43719 755 aaKnown RBP16.55■□□□□ 0.24
NEK9-201ENST00000238616 CCDC34Q96HJ3 373 aa16.55■□□□□ 0.24
NEK9-201ENST00000238616 FOXD4L1Q9NU39 408 aa16.55■□□□□ 0.24
NEK9-201ENST00000238616 SLKQ9H2G2 1235 aaPredicted RBP16.55■□□□□ 0.24
NEK9-201ENST00000238616 LTV1Q96GA3 475 aaPredicted RBP16.54■□□□□ 0.24
NEK9-201ENST00000238616 GGT6Q6P531 493 aa16.54■□□□□ 0.24
NEK9-201ENST00000238616 TRIM34Q9BYJ4 488 aa16.54■□□□□ 0.24
NEK9-201ENST00000238616 PHF23Q9BUL5 403 aaPredicted RBP16.54■□□□□ 0.24
NEK9-201ENST00000238616 SPAG9O60271 1321 aaKnown RBP16.53■□□□□ 0.24
NEK9-201ENST00000238616 PPP4R2Q9NY27 417 aa16.53■□□□□ 0.24
NEK9-201ENST00000238616 FBXW7Q969H0 707 aa16.53■□□□□ 0.24
NEK9-201ENST00000238616 CWC22Q9HCG8 908 aaKnown RBP16.52■□□□□ 0.24
NEK9-201ENST00000238616 CCAR2Q8N163 923 aaKnown RBP16.52■□□□□ 0.24
NEK9-201ENST00000238616 SYAP1Q96A49 352 aaPredicted RBP16.52■□□□□ 0.24
NEK9-201ENST00000238616 GBP4Q96PP9 640 aa16.52■□□□□ 0.24
NEK9-201ENST00000238616 CTDP1Q9Y5B0 961 aaPredicted RBP16.52■□□□□ 0.24
NEK9-201ENST00000238616 HDGFL2Q7Z4V5 671 aaPredicted RBP16.52■□□□□ 0.23
NEK9-201ENST00000238616 NUTM2FA1L443 756 aa16.51■□□□□ 0.23
NEK9-201ENST00000238616 SAMD1Q6SPF0 538 aaPredicted RBP16.51■□□□□ 0.23
NEK9-201ENST00000238616 TPM3P06753 285 aa16.51■□□□□ 0.23
NEK9-201ENST00000238616 IPO8O15397 1037 aaKnown RBP16.5■□□□□ 0.23
NEK9-201ENST00000238616 CFAP44Q96MT7 982 aa16.49■□□□□ 0.23
NEK9-201ENST00000238616 FOXD4L6Q3SYB3 417 aaPredicted RBP16.49■□□□□ 0.23
NEK9-201ENST00000238616 FOXD4L3Q6VB84 417 aaPredicted RBP16.49■□□□□ 0.23
NEK9-201ENST00000238616 TSR1Q2NL82 804 aaKnown RBP16.49■□□□□ 0.23
NEK9-201ENST00000238616 SF3A1Q15459 793 aaKnown RBP16.48■□□□□ 0.23
NEK9-201ENST00000238616 EVA1CP58658 441 aa16.48■□□□□ 0.23
NEK9-201ENST00000238616 MEX3CQ5U5Q3 659 aaKnown RBP16.48■□□□□ 0.23
NEK9-201ENST00000238616 U2AF1L5P0DN76 240 aaPredicted RBP16.48■□□□□ 0.23
NEK9-201ENST00000238616 U2AF1Q01081 240 aaKnown RBP eCLIP16.48■□□□□ 0.23
NEK9-201ENST00000238616 MFAP1P55081 439 aaKnown RBP16.47■□□□□ 0.23
NEK9-201ENST00000238616 STK31Q9BXU1 1019 aa16.47■□□□□ 0.23
NEK9-201ENST00000238616 SIN3AQ96ST3 1273 aa16.46■□□□□ 0.23
NEK9-201ENST00000238616 H3BQV1 296 aa16.45■□□□□ 0.22
NEK9-201ENST00000238616 IFFO2Q5TF58 517 aa16.45■□□□□ 0.22
NEK9-201ENST00000238616 NGEFQ8N5V2 710 aa16.45■□□□□ 0.22
NEK9-201ENST00000238616 NUTM2DQ5VT03 806 aaPredicted RBP16.45■□□□□ 0.22
NEK9-201ENST00000238616 SETQ01105 290 aaPredicted RBP16.44■□□□□ 0.22
NEK9-201ENST00000238616 DEKP35659 375 aaKnown RBP16.44■□□□□ 0.22
NEK9-201ENST00000238616 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.44■□□□□ 0.22
NEK9-201ENST00000238616 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.43■□□□□ 0.22
NEK9-201ENST00000238616 PCMTD1Q96MG8 357 aaPredicted RBP16.43■□□□□ 0.22
NEK9-201ENST00000238616 KIF16BQ96L93 1317 aa16.43■□□□□ 0.22
NEK9-201ENST00000238616 SYTL4Q96C24 671 aaPredicted RBP16.43■□□□□ 0.22
NEK9-201ENST00000238616 AKAP17AQ02040 695 aaKnown RBP16.43■□□□□ 0.22
NEK9-201ENST00000238616 DCAF1Q9Y4B6 1507 aa16.42■□□□□ 0.22
NEK9-201ENST00000238616 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.42■□□□□ 0.22
NEK9-201ENST00000238616 CALD1Q05682 793 aaKnown RBP16.41■□□□□ 0.22
NEK9-201ENST00000238616 CSPP1Q1MSJ5 1256 aa16.41■□□□□ 0.22
NEK9-201ENST00000238616 AEBP2Q6ZN18 517 aaPredicted RBP16.41■□□□□ 0.22
NEK9-201ENST00000238616 NGDNQ8NEJ9 315 aaKnown RBP16.41■□□□□ 0.22
NEK9-201ENST00000238616 AMPHP49418 695 aa16.41■□□□□ 0.22
NEK9-201ENST00000238616 TPM2P07951 284 aa16.4■□□□□ 0.22
NEK9-201ENST00000238616 USP35Q9P2H5 1018 aa16.4■□□□□ 0.22
NEK9-201ENST00000238616 SMC4Q9NTJ3 1288 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms