RNA–Protein interactions for RNA: ENST00000223336.10

COA1-201, Transcript of cytochrome c oxidase assembly factor 1 homolog, humanhuman

APPRIS P3 TSL 2 BASIC

Gene COA1, Length 927 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COA1-201ENST00000223336 RIOK3O14730 519 aaKnown RBP12.52□□□□□ -0.41
COA1-201ENST00000223336 RNF25Q96BH1 459 aaPredicted RBP12.49□□□□□ -0.41
COA1-201ENST00000223336 PHF8Q9UPP1 1060 aa12.48□□□□□ -0.41
COA1-201ENST00000223336 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.47□□□□□ -0.41
COA1-201ENST00000223336 VGFO15240 615 aaPredicted RBP12.47□□□□□ -0.41
COA1-201ENST00000223336 ZFP91Q96JP5 570 aaPredicted RBP12.47□□□□□ -0.41
COA1-201ENST00000223336 ARSIQ5FYB1 569 aa12.43□□□□□ -0.42
COA1-201ENST00000223336 ZNF316A6NFI3 1004 aaPredicted RBP12.42□□□□□ -0.42
COA1-201ENST00000223336 NLRP6P59044 892 aa12.38□□□□□ -0.43
COA1-201ENST00000223336 FBXO22Q8NEZ5 403 aa12.38□□□□□ -0.43
COA1-201ENST00000223336 LSM11P83369 360 aaKnown RBP eCLIP12.37□□□□□ -0.435e-7■■■■■ 62.3
COA1-201ENST00000223336 ANKRD13DQ6ZTN6 518 aa12.36□□□□□ -0.43
COA1-201ENST00000223336 KHSRPQ92945 711 aaKnown RBP eCLIP12.35□□□□□ -0.432e-9■■■■■ 33.1
COA1-201ENST00000223336 KIF3CO14782 793 aa12.34□□□□□ -0.43
COA1-201ENST00000223336 PBX2P40425 430 aa12.33□□□□□ -0.44
COA1-201ENST00000223336 BCL11BQ9C0K0 894 aaPredicted RBP12.29□□□□□ -0.44
COA1-201ENST00000223336 TAOK2Q9UL54 1235 aa12.29□□□□□ -0.44
COA1-201ENST00000223336 SLC34A2O95436 690 aa12.27□□□□□ -0.45
COA1-201ENST00000223336 MFRPQ9BY79 579 aa12.27□□□□□ -0.45
COA1-201ENST00000223336 C2orf72A6NCS6 295 aa12.25□□□□□ -0.45
COA1-201ENST00000223336 NUDT7P0C024 238 aa12.25□□□□□ -0.45
COA1-201ENST00000223336 POTEEQ6S8J3 1075 aa12.24□□□□□ -0.45
COA1-201ENST00000223336 LHX6Q9UPM6 363 aa12.21□□□□□ -0.45
COA1-201ENST00000223336 PCDHGA4Q9Y5G9 962 aa12.21□□□□□ -0.45
COA1-201ENST00000223336 STK24Q9Y6E0 443 aa12.21□□□□□ -0.45
COA1-201ENST00000223336 HCSTQ9UBK5 93 aa12.17□□□□□ -0.46
COA1-201ENST00000223336 PLA2G2EQ9NZK7 142 aa12.16□□□□□ -0.46
COA1-201ENST00000223336 AXIN2Q9Y2T1 843 aa12.16□□□□□ -0.46
COA1-201ENST00000223336 PSDA5PKW4 1024 aaPredicted RBP12.14□□□□□ -0.47
COA1-201ENST00000223336 STK25O00506 426 aa12.14□□□□□ -0.47
COA1-201ENST00000223336 ADGRD1Q6QNK2 874 aa12.13□□□□□ -0.47
COA1-201ENST00000223336 ARHGAP33O14559 1287 aa12.12□□□□□ -0.47
COA1-201ENST00000223336 TMC2Q8TDI7 906 aa12.12□□□□□ -0.47
COA1-201ENST00000223336 KDM4FA0A1W2PPD8 638 aa12.1□□□□□ -0.47
COA1-201ENST00000223336 TK2O00142 265 aa12.08□□□□□ -0.48
COA1-201ENST00000223336 HRO43593 1189 aa12.05□□□□□ -0.48
COA1-201ENST00000223336 PTCD2Q8WV60 388 aaKnown RBP12.05□□□□□ -0.48
COA1-201ENST00000223336 ECM2O94769 699 aaPredicted RBP12.02□□□□□ -0.49
COA1-201ENST00000223336 DMRTA1Q5VZB9 504 aa11.99□□□□□ -0.49
COA1-201ENST00000223336 PPP1R37O75864 691 aa11.98□□□□□ -0.49
COA1-201ENST00000223336 FOXK1P85037 733 aa11.97□□□□□ -0.49
COA1-201ENST00000223336 PSEN2P49810 448 aa11.96□□□□□ -0.49
COA1-201ENST00000223336 RGL2O15211 777 aa11.95□□□□□ -0.5
COA1-201ENST00000223336 PPP4R3BQ5MIZ7 849 aa11.95□□□□□ -0.5
COA1-201ENST00000223336 PKD2Q13563 968 aa11.91□□□□□ -0.5
COA1-201ENST00000223336 PLPP6Q8IY26 295 aa11.91□□□□□ -0.5
COA1-201ENST00000223336 KCTD12Q96CX2 325 aaKnown RBP11.91□□□□□ -0.5
COA1-201ENST00000223336 GPHNQ9NQX3 736 aaPredicted RBP11.91□□□□□ -0.5
COA1-201ENST00000223336 TBC1D12O60347 775 aa11.89□□□□□ -0.51
COA1-201ENST00000223336 KCNH8Q96L42 1107 aa11.87□□□□□ -0.51
COA1-201ENST00000223336 IFFO2Q5TF58 517 aa11.86□□□□□ -0.51
COA1-201ENST00000223336 DSG2Q14126 1118 aa11.85□□□□□ -0.51
COA1-201ENST00000223336 STAC3Q96MF2 364 aa11.85□□□□□ -0.51
COA1-201ENST00000223336 KCNK17Q96T54 332 aa11.85□□□□□ -0.51
COA1-201ENST00000223336 RGS20O76081 388 aa11.84□□□□□ -0.51
COA1-201ENST00000223336 VPS9D1Q9Y2B5 631 aa11.84□□□□□ -0.51
COA1-201ENST00000223336 SLC4A5Q9BY07 1137 aa11.82□□□□□ -0.52
COA1-201ENST00000223336 OXER1Q8TDS5 423 aa11.8□□□□□ -0.52
COA1-201ENST00000223336 BCL2L12Q9HB09 334 aa11.78□□□□□ -0.52
COA1-201ENST00000223336 HS6ST3Q8IZP7 471 aa11.77□□□□□ -0.53
COA1-201ENST00000223336 BHMG1C9JSJ3 638 aaPredicted RBP11.75□□□□□ -0.53
COA1-201ENST00000223336 PTPN5P54829 565 aa11.75□□□□□ -0.53
COA1-201ENST00000223336 THSD4Q6ZMP0 1018 aa11.74□□□□□ -0.53
COA1-201ENST00000223336 NISCHQ9Y2I1 1504 aa11.74□□□□□ -0.53
COA1-201ENST00000223336 ZNF454Q8N9F8 522 aa11.73□□□□□ -0.53
COA1-201ENST00000223336 A0A0G2JS52 829 aa11.71□□□□□ -0.53
COA1-201ENST00000223336 FOSBP53539 338 aa11.71□□□□□ -0.53
COA1-201ENST00000223336 PTPREP23469 700 aa11.69□□□□□ -0.54
COA1-201ENST00000223336 ZBED2Q9BTP6 218 aa11.69□□□□□ -0.54
COA1-201ENST00000223336 IRX2Q9BZI1 471 aaPredicted RBP11.69□□□□□ -0.54
COA1-201ENST00000223336 CRISPLD2Q9H0B8 497 aa11.69□□□□□ -0.54
COA1-201ENST00000223336 UPF1Q92900 1129 aaKnown RBP eCLIP11.67□□□□□ -0.544e-8■■□□□ 13.1
COA1-201ENST00000223336 WNT2BQ93097 391 aa11.66□□□□□ -0.54
COA1-201ENST00000223336 JPH4Q96JJ6 628 aa11.66□□□□□ -0.54
COA1-201ENST00000223336 DNAJC5Q9H3Z4 198 aa11.66□□□□□ -0.54
COA1-201ENST00000223336 PPP1R15BQ5SWA1 713 aa11.65□□□□□ -0.54
COA1-201ENST00000223336 MRPL50Q8N5N7 158 aaKnown RBP11.65□□□□□ -0.54
COA1-201ENST00000223336 ANO8Q9HCE9 1232 aaPredicted RBP11.65□□□□□ -0.54
COA1-201ENST00000223336 GOLGA8CPA6NN73 597 aa11.63□□□□□ -0.55
COA1-201ENST00000223336 NBPF3Q9H094 633 aa11.63□□□□□ -0.55
COA1-201ENST00000223336 RYDENQ9NUL5 291 aaKnown RBP11.61□□□□□ -0.55
COA1-201ENST00000223336 ZDHHC16Q969W1 377 aa11.6□□□□□ -0.55
COA1-201ENST00000223336 NKX1-1Q15270 411 aaPredicted RBP11.58□□□□□ -0.56
COA1-201ENST00000223336 ADAM33Q9BZ11 813 aa11.58□□□□□ -0.56
COA1-201ENST00000223336 ITGBL1O95965 494 aaPredicted RBP11.57□□□□□ -0.56
COA1-201ENST00000223336 NCKAP5LQ9HCH0 1330 aa11.57□□□□□ -0.56
COA1-201ENST00000223336 EVI5O60447 810 aa11.56□□□□□ -0.56
COA1-201ENST00000223336 CHGAP10645 457 aaKnown RBP11.55□□□□□ -0.56
COA1-201ENST00000223336 PPP1R3GB7ZBB8 358 aa11.54□□□□□ -0.56
COA1-201ENST00000223336 PDE4AP27815 886 aa11.54□□□□□ -0.56
COA1-201ENST00000223336 RABGEF1Q9UJ41 708 aa11.52□□□□□ -0.57
COA1-201ENST00000223336 ANKK1Q8NFD2 765 aa11.5□□□□□ -0.57
COA1-201ENST00000223336 NYAP1Q6ZVC0 841 aa11.48□□□□□ -0.57
COA1-201ENST00000223336 LAPTM4BQ86VI4 370 aa11.47□□□□□ -0.57
COA1-201ENST00000223336 MFSD10Q14728 455 aa11.46□□□□□ -0.57
COA1-201ENST00000223336 DDX27Q96GQ7 796 aaKnown RBP11.46□□□□□ -0.57
COA1-201ENST00000223336 PCDHGA10Q9Y5H3 936 aa11.45□□□□□ -0.58
COA1-201ENST00000223336 SOWAHBA6NEL2 793 aa11.44□□□□□ -0.58
COA1-201ENST00000223336 PROX2Q3B8N5 592 aa11.44□□□□□ -0.58
COA1-201ENST00000223336 COL9A1P20849 921 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms