RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 CC2D1BQ5T0F9 858 aaKnown RBP18.4■□□□□ 0.54
SPTLC2-201ENST00000216484 CSRNP3Q8WYN3 585 aa18.4■□□□□ 0.54
SPTLC2-201ENST00000216484 CCAR2Q8N163 923 aaKnown RBP18.4■□□□□ 0.54
SPTLC2-201ENST00000216484 TAF7LQ5H9L4 462 aa18.39■□□□□ 0.53
SPTLC2-201ENST00000216484 VPS53Q5VIR6 699 aa18.38■□□□□ 0.53
SPTLC2-201ENST00000216484 MTUS2Q5JR59 1369 aa18.37■□□□□ 0.53
SPTLC2-201ENST00000216484 RRP7BPQ9NSQ0 103 aa18.37■□□□□ 0.53
SPTLC2-201ENST00000216484 SLKQ9H2G2 1235 aaPredicted RBP18.37■□□□□ 0.53
SPTLC2-201ENST00000216484 POGKQ9P215 609 aa18.36■□□□□ 0.53
SPTLC2-201ENST00000216484 ZNF771Q7L3S4 317 aaPredicted RBP18.35■□□□□ 0.53
SPTLC2-201ENST00000216484 SOX12O15370 315 aa18.35■□□□□ 0.53
SPTLC2-201ENST00000216484 KAT6BQ8WYB5 2073 aa18.35■□□□□ 0.53
SPTLC2-201ENST00000216484 TSR1Q2NL82 804 aaKnown RBP18.34■□□□□ 0.53
SPTLC2-201ENST00000216484 TMX4Q9H1E5 349 aaPredicted RBP18.34■□□□□ 0.53
SPTLC2-201ENST00000216484 GOLGA6L3A6NEY3 463 aa18.34■□□□□ 0.53
SPTLC2-201ENST00000216484 PHF14O94880 888 aa18.34■□□□□ 0.53
SPTLC2-201ENST00000216484 TPD52L1Q16890 204 aaPredicted RBP18.33■□□□□ 0.52
SPTLC2-201ENST00000216484 CSPP1Q1MSJ5 1256 aa18.33■□□□□ 0.52
SPTLC2-201ENST00000216484 CCDC70Q6NSX1 233 aa18.31■□□□□ 0.52
SPTLC2-201ENST00000216484 CARD11Q9BXL7 1154 aa18.31■□□□□ 0.52
SPTLC2-201ENST00000216484 GPS2Q13227 327 aa18.3■□□□□ 0.52
SPTLC2-201ENST00000216484 RTF1Q92541 710 aaKnown RBP18.29■□□□□ 0.52
SPTLC2-201ENST00000216484 ZNF330Q9Y3S2 320 aaPredicted RBP18.29■□□□□ 0.52
SPTLC2-201ENST00000216484 CALD1Q05682 793 aaKnown RBP18.29■□□□□ 0.52
SPTLC2-201ENST00000216484 GORABQ5T7V8 394 aa18.28■□□□□ 0.52
SPTLC2-201ENST00000216484 TRIM6-TRIM34B2RNG4 842 aa18.27■□□□□ 0.52
SPTLC2-201ENST00000216484 CHMP3Q9Y3E7 222 aa18.27■□□□□ 0.52
SPTLC2-201ENST00000216484 GPATCH3Q96I76 525 aa18.27■□□□□ 0.52
SPTLC2-201ENST00000216484 MARCH6O60337 910 aa18.27■□□□□ 0.51
SPTLC2-201ENST00000216484 KCNH8Q96L42 1107 aa18.25■□□□□ 0.51
SPTLC2-201ENST00000216484 CNKSR2Q8WXI2 1034 aa18.25■□□□□ 0.51
SPTLC2-201ENST00000216484 G3V3G9 751 aa18.25■□□□□ 0.51
SPTLC2-201ENST00000216484 DCAF8Q5TAQ9 597 aa18.25■□□□□ 0.51
SPTLC2-201ENST00000216484 VSIG10Q8N0Z9 540 aa18.24■□□□□ 0.51
SPTLC2-201ENST00000216484 NOL8Q76FK4 1167 aaKnown RBP18.23■□□□□ 0.51
SPTLC2-201ENST00000216484 SF3A1Q15459 793 aaKnown RBP18.22■□□□□ 0.51
SPTLC2-201ENST00000216484 MAP7D2Q96T17 732 aa18.22■□□□□ 0.51
SPTLC2-201ENST00000216484 FOXD4L1Q9NU39 408 aa18.21■□□□□ 0.51
SPTLC2-201ENST00000216484 TPM2P07951 284 aa18.21■□□□□ 0.51
SPTLC2-201ENST00000216484 GOLGA6L19H0YKK7 550 aa18.21■□□□□ 0.51
SPTLC2-201ENST00000216484 TEX35Q5T0J7 233 aa18.21■□□□□ 0.51
SPTLC2-201ENST00000216484 ABCC9O60706 1549 aa18.2■□□□□ 0.5
SPTLC2-201ENST00000216484 ZNF592Q92610 1267 aa18.2■□□□□ 0.5
SPTLC2-201ENST00000216484 FOXD4L5Q5VV16 416 aaPredicted RBP18.2■□□□□ 0.5
SPTLC2-201ENST00000216484 FOXD4L4Q8WXT5 416 aaPredicted RBP18.2■□□□□ 0.5
SPTLC2-201ENST00000216484 RBM19Q9Y4C8 960 aaKnown RBP18.2■□□□□ 0.5
SPTLC2-201ENST00000216484 TPM1P09493 284 aa18.2■□□□□ 0.5
SPTLC2-201ENST00000216484 DCAF1Q9Y4B6 1507 aa18.19■□□□□ 0.5
SPTLC2-201ENST00000216484 MFAP1P55081 439 aaKnown RBP18.18■□□□□ 0.5
SPTLC2-201ENST00000216484 APPP05067 770 aa18.18■□□□□ 0.5
SPTLC2-201ENST00000216484 ITPRIPQ8IWB1 547 aa18.18■□□□□ 0.5
SPTLC2-201ENST00000216484 TCEAL9Q9UHQ7 104 aa18.17■□□□□ 0.5
SPTLC2-201ENST00000216484 IPO8O15397 1037 aaKnown RBP18.17■□□□□ 0.5
SPTLC2-201ENST00000216484 KIF16BQ96L93 1317 aa18.16■□□□□ 0.5
SPTLC2-201ENST00000216484 H3BQV1 296 aa18.15■□□□□ 0.5
SPTLC2-201ENST00000216484 IFFO2Q5TF58 517 aa18.15■□□□□ 0.5
SPTLC2-201ENST00000216484 RSPH6AQ9H0K4 717 aa18.15■□□□□ 0.5
SPTLC2-201ENST00000216484 PCMTD1Q96MG8 357 aaPredicted RBP18.14■□□□□ 0.49
SPTLC2-201ENST00000216484 NOM1Q5C9Z4 860 aaKnown RBP18.14■□□□□ 0.49
SPTLC2-201ENST00000216484 TOMM22Q9NS69 142 aa18.13■□□□□ 0.49
SPTLC2-201ENST00000216484 SRPK2P78362 688 aaKnown RBP18.12■□□□□ 0.49
SPTLC2-201ENST00000216484 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.12■□□□□ 0.493e-9■■■■■ 258
SPTLC2-201ENST00000216484 RUFY1Q96T51 708 aa18.12■□□□□ 0.49
SPTLC2-201ENST00000216484 HMMRO75330 724 aa18.11■□□□□ 0.49
SPTLC2-201ENST00000216484 FRAT2O75474 233 aaPredicted RBP18.11■□□□□ 0.49
SPTLC2-201ENST00000216484 FOXD4L6Q3SYB3 417 aaPredicted RBP18.11■□□□□ 0.49
SPTLC2-201ENST00000216484 FOXD4L3Q6VB84 417 aaPredicted RBP18.11■□□□□ 0.49
SPTLC2-201ENST00000216484 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.1■□□□□ 0.49
SPTLC2-201ENST00000216484 BECN2A8MW95 431 aa18.09■□□□□ 0.49
SPTLC2-201ENST00000216484 CHMP7Q8WUX9 453 aaPredicted RBP18.09■□□□□ 0.49
SPTLC2-201ENST00000216484 AK7Q96M32 723 aa18.08■□□□□ 0.49
SPTLC2-201ENST00000216484 ST18O60284 1047 aa18.08■□□□□ 0.49
SPTLC2-201ENST00000216484 KIF3AQ9Y496 699 aa18.08■□□□□ 0.48
SPTLC2-201ENST00000216484 PAK3O75914 559 aaPredicted RBP18.08■□□□□ 0.48
SPTLC2-201ENST00000216484 IPO7O95373 1038 aaKnown RBP18.08■□□□□ 0.48
SPTLC2-201ENST00000216484 RWDD1Q9H446 243 aaPredicted RBP18.07■□□□□ 0.48
SPTLC2-201ENST00000216484 MORC1Q86VD1 984 aa18.07■□□□□ 0.48
SPTLC2-201ENST00000216484 TCERG1O14776 1098 aaKnown RBP18.07■□□□□ 0.48
SPTLC2-201ENST00000216484 CCDC180Q9P1Z9 1646 aa18.06■□□□□ 0.48
SPTLC2-201ENST00000216484 HOMER1Q86YM7 354 aa18.06■□□□□ 0.48
SPTLC2-201ENST00000216484 CCDC191Q8NCU4 936 aa18.06■□□□□ 0.48
SPTLC2-201ENST00000216484 TIMELESSQ9UNS1 1208 aa18.06■□□□□ 0.48
SPTLC2-201ENST00000216484 PLCD4Q9BRC7 762 aa18.05■□□□□ 0.48
SPTLC2-201ENST00000216484 SAFB2Q14151 953 aaKnown RBP eCLIP18.05■□□□□ 0.48
SPTLC2-201ENST00000216484 ODF2Q5BJF6 829 aa18.05■□□□□ 0.48
SPTLC2-201ENST00000216484 FAM184AQ8NB25 1140 aa18.05■□□□□ 0.48
SPTLC2-201ENST00000216484 AKAP17AQ02040 695 aaKnown RBP18.05■□□□□ 0.48
SPTLC2-201ENST00000216484 TMF1P82094 1093 aa18.04■□□□□ 0.48
SPTLC2-201ENST00000216484 DDX11L8A8MPP1 907 aa18.04■□□□□ 0.48
SPTLC2-201ENST00000216484 NAP1L1P55209 391 aaKnown RBP18.03■□□□□ 0.48
SPTLC2-201ENST00000216484 FAM13BQ9NYF5 915 aa18.03■□□□□ 0.48
SPTLC2-201ENST00000216484 RDXP35241 583 aaKnown RBP18.02■□□□□ 0.48
SPTLC2-201ENST00000216484 PMFBP1Q8TBY8 1022 aa18.02■□□□□ 0.48
SPTLC2-201ENST00000216484 MCTP1Q6DN14 999 aa18.02■□□□□ 0.48
SPTLC2-201ENST00000216484 RAD21O60216 631 aa18.02■□□□□ 0.48
SPTLC2-201ENST00000216484 BCL11BQ9C0K0 894 aaPredicted RBP18.02■□□□□ 0.47
SPTLC2-201ENST00000216484 CDR1P51861 262 aa18.01■□□□□ 0.47
SPTLC2-201ENST00000216484 SLC4A10Q6U841 1118 aa18.01■□□□□ 0.47
SPTLC2-201ENST00000216484 CT47A1Q5JQC4 288 aaPredicted RBP18.01■□□□□ 0.47
SPTLC2-201ENST00000216484 CCDC9Q9Y3X0 531 aaKnown RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms