RNA–Protein interactions for RNA: ENSMUST00000225246.1

Ssr1-203, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,825 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-203ENSMUST00000225246 Soga1E1U8D0 1418 aa18.1■□□□□ 0.49
Ssr1-203ENSMUST00000225246 Disp1Q3TDN0 1521 aa18.09■□□□□ 0.49
Ssr1-203ENSMUST00000225246 Pik3c2gO70167 1506 aa18.08■□□□□ 0.48
Ssr1-203ENSMUST00000225246 Usp47Q8BY87 1376 aa18.07■□□□□ 0.48
Ssr1-203ENSMUST00000225246 Ube2uB1AUC4 352 aa18.07■□□□□ 0.48
Ssr1-203ENSMUST00000225246 Abcc5Q9R1X5 1436 aa18.06■□□□□ 0.48
Ssr1-203ENSMUST00000225246 Kif21bQ9QXL1 1668 aa18.05■□□□□ 0.48
Ssr1-203ENSMUST00000225246 Grin2aP35436 1464 aa18.03■□□□□ 0.48
Ssr1-203ENSMUST00000225246 Slc4a2P13808 1237 aaKnown RBP18.02■□□□□ 0.48
Ssr1-203ENSMUST00000225246 Supt16hQ920B9 1047 aa18.02■□□□□ 0.48
Ssr1-203ENSMUST00000225246 Pkd2O35245 966 aa18.02■□□□□ 0.47
Ssr1-203ENSMUST00000225246 Plekhh2Q8C115 1491 aa18.01■□□□□ 0.47
Ssr1-203ENSMUST00000225246 Cabp1Q9JLK7 227 aa18.01■□□□□ 0.47
Ssr1-203ENSMUST00000225246 Il16O54824 1322 aa18.01■□□□□ 0.47
Ssr1-203ENSMUST00000225246 WizO88286 1684 aaKnown RBP18.01■□□□□ 0.47
Ssr1-203ENSMUST00000225246 PnisrA2AJT4 805 aaKnown RBP18■□□□□ 0.47
Ssr1-203ENSMUST00000225246 Mrs2Q5NCE8 434 aa18■□□□□ 0.47
Ssr1-203ENSMUST00000225246 Plekhg5Q66T02 1073 aa18■□□□□ 0.47
Ssr1-203ENSMUST00000225246 Pelp1Q9DBD5 1123 aaKnown RBP18■□□□□ 0.47
Ssr1-203ENSMUST00000225246 Arhgef12Q8R4H2 1543 aaKnown RBP17.99■□□□□ 0.47
Ssr1-203ENSMUST00000225246 Mbd5B1AYB6 1498 aa17.99■□□□□ 0.47
Ssr1-203ENSMUST00000225246 Wdr43Q6ZQL4 677 aaKnown RBP17.99■□□□□ 0.47
Ssr1-203ENSMUST00000225246 Plb1Q3TTY0 1478 aa17.98■□□□□ 0.47
Ssr1-203ENSMUST00000225246 Kdm3bQ6ZPY7 1562 aa17.97■□□□□ 0.47
Ssr1-203ENSMUST00000225246 Ncoa3O09000 1398 aa17.96■□□□□ 0.47
Ssr1-203ENSMUST00000225246 Arhgef40Q3UPH7 1517 aa17.96■□□□□ 0.46
Ssr1-203ENSMUST00000225246 Cwc22Q8C5N3 908 aaKnown RBP17.95■□□□□ 0.46
Ssr1-203ENSMUST00000225246 DroshaQ5HZJ0 1373 aaKnown RBP17.94■□□□□ 0.46
Ssr1-203ENSMUST00000225246 Rapgef6Q5NCJ1 1609 aa17.94■□□□□ 0.46
Ssr1-203ENSMUST00000225246 SphkapQ6NSW3 1687 aa17.94■□□□□ 0.46
Ssr1-203ENSMUST00000225246 Exoc6Q8R313 802 aa17.93■□□□□ 0.46
Ssr1-203ENSMUST00000225246 Slc24a1Q91WD8 1130 aa17.93■□□□□ 0.46
Ssr1-203ENSMUST00000225246 AlkP97793 1621 aa17.92■□□□□ 0.46
Ssr1-203ENSMUST00000225246 Ppp4r2Q0VGB7 417 aa17.91■□□□□ 0.46
Ssr1-203ENSMUST00000225246 NrdcQ8BHG1 1161 aa17.91■□□□□ 0.46
Ssr1-203ENSMUST00000225246 PxdnQ3UQ28 1475 aa17.91■□□□□ 0.46
Ssr1-203ENSMUST00000225246 Zfp644E9QA22 1323 aa17.91■□□□□ 0.46
Ssr1-203ENSMUST00000225246 Bcl11aQ9QYE3 773 aa17.91■□□□□ 0.46
Ssr1-203ENSMUST00000225246 Eif4g3Q80XI3 1579 aaKnown RBP17.91■□□□□ 0.46
Ssr1-203ENSMUST00000225246 Kdm6bQ5NCY0 1641 aa17.9■□□□□ 0.46
Ssr1-203ENSMUST00000225246 Kiaa1551Q5DTW7 1521 aa17.9■□□□□ 0.46
Ssr1-203ENSMUST00000225246 Shroom2A2ALU4 1481 aa17.9■□□□□ 0.46
Ssr1-203ENSMUST00000225246 Wwc2Q6NXJ0 1187 aa17.9■□□□□ 0.46
Ssr1-203ENSMUST00000225246 Map3k4O08648 1597 aa17.89■□□□□ 0.46
Ssr1-203ENSMUST00000225246 Mtus2Q3UHD3 1353 aa17.89■□□□□ 0.45
Ssr1-203ENSMUST00000225246 Naip6Q9JIB6 1403 aa17.89■□□□□ 0.45
Ssr1-203ENSMUST00000225246 Arhgef11Q68FM7 1552 aa17.89■□□□□ 0.45
Ssr1-203ENSMUST00000225246 DiexfQ8BTT6 772 aaKnown RBP17.88■□□□□ 0.45
Ssr1-203ENSMUST00000225246 Cdc42bpaQ3UU96 1719 aa17.88■□□□□ 0.45
Ssr1-203ENSMUST00000225246 Adcy10Q8C0T9 1614 aa17.88■□□□□ 0.45
Ssr1-203ENSMUST00000225246 Abca16E9PWJ7 1678 aa17.88■□□□□ 0.45
Ssr1-203ENSMUST00000225246 WrnO09053 1401 aa17.87■□□□□ 0.45
Ssr1-203ENSMUST00000225246 Myom3A2ABU4 1439 aa17.86■□□□□ 0.45
Ssr1-203ENSMUST00000225246 Pbrm1Q8BSQ9 1634 aaKnown RBP17.85■□□□□ 0.45
Ssr1-203ENSMUST00000225246 Dapk1Q80YE7 1442 aa17.84■□□□□ 0.45
Ssr1-203ENSMUST00000225246 Trpm2Q91YD4 1506 aa17.84■□□□□ 0.45
Ssr1-203ENSMUST00000225246 Kif14L0N7N1 1674 aaKnown RBP17.84■□□□□ 0.45
Ssr1-203ENSMUST00000225246 Liat1Q810M6 228 aa17.84■□□□□ 0.45
Ssr1-203ENSMUST00000225246 Mug2P28666 1451 aa17.83■□□□□ 0.45
Ssr1-203ENSMUST00000225246 Eif5bQ05D44 1216 aaKnown RBP17.83■□□□□ 0.44
Ssr1-203ENSMUST00000225246 Adgrb2Q8CGM1 1561 aa17.83■□□□□ 0.44
Ssr1-203ENSMUST00000225246 Nup160Q9Z0W3 1402 aaKnown RBP17.82■□□□□ 0.44
Ssr1-203ENSMUST00000225246 Dhx57Q6P5D3 1388 aaKnown RBP17.81■□□□□ 0.44
Ssr1-203ENSMUST00000225246 Setd1bQ8CFT2 1985 aa17.81■□□□□ 0.44
Ssr1-203ENSMUST00000225246 Mapkbp1Q6NS57 1503 aa17.79■□□□□ 0.44
Ssr1-203ENSMUST00000225246 Rock2P70336 1388 aa17.78■□□□□ 0.44
Ssr1-203ENSMUST00000225246 Col17a1Q07563 1470 aa17.78■□□□□ 0.44
Ssr1-203ENSMUST00000225246 Cpsf1Q9EPU4 1441 aaKnown RBP17.78■□□□□ 0.44
Ssr1-203ENSMUST00000225246 Dhx9O70133 1380 aaKnown RBP17.78■□□□□ 0.44
Ssr1-203ENSMUST00000225246 Mink1Q9JM52 1308 aa17.77■□□□□ 0.43
Ssr1-203ENSMUST00000225246 RalgapbQ8BQZ4 1484 aa17.76■□□□□ 0.43
Ssr1-203ENSMUST00000225246 Fam163aQ8CAA5 168 aa17.76■□□□□ 0.43
Ssr1-203ENSMUST00000225246 Supt6hQ62383 1726 aaKnown RBP17.76■□□□□ 0.43
Ssr1-203ENSMUST00000225246 Wdr7Q920I9 1489 aa17.75■□□□□ 0.43
Ssr1-203ENSMUST00000225246 Mlh3A0A1Y7VMP7 1443 aa17.75■□□□□ 0.43
Ssr1-203ENSMUST00000225246 Abcc2Q8VI47 1543 aa17.75■□□□□ 0.43
Ssr1-203ENSMUST00000225246 Ttll5Q8CHB8 1328 aa17.75■□□□□ 0.43
Ssr1-203ENSMUST00000225246 Cc2d2bA0A286YDU8 1405 aa17.75■□□□□ 0.43
Ssr1-203ENSMUST00000225246 Rundc1Q0VDN7 615 aa17.74■□□□□ 0.43
Ssr1-203ENSMUST00000225246 Egfem1Q8C088 590 aa17.74■□□□□ 0.43
Ssr1-203ENSMUST00000225246 Ofd1Q80Z25 1017 aa17.73■□□□□ 0.43
Ssr1-203ENSMUST00000225246 Caskin1Q6P9K8 1431 aa17.72■□□□□ 0.43
Ssr1-203ENSMUST00000225246 Gapvd1Q6PAR5 1458 aa17.71■□□□□ 0.43
Ssr1-203ENSMUST00000225246 Magi1Q6RHR9 1471 aa17.71■□□□□ 0.43
Ssr1-203ENSMUST00000225246 Card11Q8CIS0 1159 aa17.71■□□□□ 0.43
Ssr1-203ENSMUST00000225246 Ccdc141E9Q8Q6 1531 aa17.7■□□□□ 0.42
Ssr1-203ENSMUST00000225246 Pak3Q61036 559 aa17.7■□□□□ 0.42
Ssr1-203ENSMUST00000225246 P3h3Q8CG70 732 aa17.7■□□□□ 0.42
Ssr1-203ENSMUST00000225246 Polr3aB2RXC6 1390 aa17.69■□□□□ 0.42
Ssr1-203ENSMUST00000225246 Kank1E9Q238 1360 aa17.69■□□□□ 0.42
Ssr1-203ENSMUST00000225246 L3mbtl2P59178 703 aa17.69■□□□□ 0.42
Ssr1-203ENSMUST00000225246 Rgl3Q3UYI5 709 aa17.69■□□□□ 0.42
Ssr1-203ENSMUST00000225246 Iqgap1Q9JKF1 1657 aaKnown RBP17.68■□□□□ 0.42
Ssr1-203ENSMUST00000225246 Arhgap31A6X8Z5 1425 aa17.68■□□□□ 0.42
Ssr1-203ENSMUST00000225246 Tcerg1Q8CGF7 1100 aaKnown RBP17.68■□□□□ 0.42
Ssr1-203ENSMUST00000225246 Rock1P70335 1354 aa17.67■□□□□ 0.42
Ssr1-203ENSMUST00000225246 Cdk13Q69ZA1 1511 aaKnown RBP17.67■□□□□ 0.42
Ssr1-203ENSMUST00000225246 Nup155Q99P88 1391 aaKnown RBP17.67■□□□□ 0.42
Ssr1-203ENSMUST00000225246 Zmym4A2A791 1549 aaKnown RBP17.66■□□□□ 0.42
Ssr1-203ENSMUST00000225246 Asxl1P59598 1514 aa17.66■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 43.5 ms