RNA–Protein interactions for RNA: ENSMUST00000200959.1

Scn8a-207, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 3 BASIC

Gene Scn8a, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-207ENSMUST00000200959 Safb2Q80YR5 991 aaKnown RBP13.59□□□□□ -0.23
Scn8a-207ENSMUST00000200959 Dip2aQ8BWT5 1523 aa13.59□□□□□ -0.23
Scn8a-207ENSMUST00000200959 Hspa1lP16627 641 aa13.58□□□□□ -0.24
Scn8a-207ENSMUST00000200959 Cux1P53564 1515 aa13.58□□□□□ -0.24
Scn8a-207ENSMUST00000200959 Yeats2Q3TUF7 1407 aa13.57□□□□□ -0.24
Scn8a-207ENSMUST00000200959 Atp10aO54827 1508 aa13.56□□□□□ -0.24
Scn8a-207ENSMUST00000200959 Npm2Q80W85 207 aa13.56□□□□□ -0.24
Scn8a-207ENSMUST00000200959 Mlh3A0A1Y7VMP7 1443 aa13.56□□□□□ -0.24
Scn8a-207ENSMUST00000200959 Kiaa0556Q8C753 1610 aa13.54□□□□□ -0.24
Scn8a-207ENSMUST00000200959 OvosQ3UU35 1456 aa13.53□□□□□ -0.24
Scn8a-207ENSMUST00000200959 Kiaa1210E9Q0C6 1637 aa13.53□□□□□ -0.24
Scn8a-207ENSMUST00000200959 Fancd2Q80V62 1450 aa13.52□□□□□ -0.25
Scn8a-207ENSMUST00000200959 Ltbp4Q8K4G1 1666 aa13.52□□□□□ -0.25
Scn8a-207ENSMUST00000200959 Polr1aO35134 1717 aaKnown RBP13.52□□□□□ -0.25
Scn8a-207ENSMUST00000200959 NpatQ8BMA5 1420 aa13.51□□□□□ -0.25
Scn8a-207ENSMUST00000200959 Slc34a2Q9DBP0 697 aa13.5□□□□□ -0.25
Scn8a-207ENSMUST00000200959 Ptch1Q61115 1434 aa13.49□□□□□ -0.25
Scn8a-207ENSMUST00000200959 4930407I10RikD3Z5T8 1512 aa13.48□□□□□ -0.25
Scn8a-207ENSMUST00000200959 Topaz1E5FYH1 1653 aa13.47□□□□□ -0.25
Scn8a-207ENSMUST00000200959 Prex2Q3LAC4 1598 aa13.47□□□□□ -0.25
Scn8a-207ENSMUST00000200959 Cfap65Q3V0B4 1847 aa13.46□□□□□ -0.25
Scn8a-207ENSMUST00000200959 Arhgap35Q91YM2 1499 aa13.46□□□□□ -0.25
Scn8a-207ENSMUST00000200959 Ankrd26Q811D2 1581 aa13.45□□□□□ -0.26
Scn8a-207ENSMUST00000200959 Dip2cE9PWR4 1557 aa13.45□□□□□ -0.26
Scn8a-207ENSMUST00000200959 Rapgef6Q5NCJ1 1609 aa13.43□□□□□ -0.26
Scn8a-207ENSMUST00000200959 Ncoa1P70365 1447 aa13.43□□□□□ -0.26
Scn8a-207ENSMUST00000200959 BlmO88700 1416 aa13.41□□□□□ -0.26
Scn8a-207ENSMUST00000200959 Arap1Q4LDD4 1452 aa13.41□□□□□ -0.26
Scn8a-207ENSMUST00000200959 Zmym4A2A791 1549 aaKnown RBP13.39□□□□□ -0.27
Scn8a-207ENSMUST00000200959 Abca6Q8K441 1624 aa13.39□□□□□ -0.27
Scn8a-207ENSMUST00000200959 RereQ80TZ9 1558 aa13.39□□□□□ -0.27
Scn8a-207ENSMUST00000200959 Ncoa2Q61026 1462 aa13.38□□□□□ -0.27
Scn8a-207ENSMUST00000200959 Magi1Q6RHR9 1471 aa13.38□□□□□ -0.27
Scn8a-207ENSMUST00000200959 Ildr2B5TVM2 661 aa13.38□□□□□ -0.27
Scn8a-207ENSMUST00000200959 Fyco1Q8VDC1 1437 aa13.36□□□□□ -0.27
Scn8a-207ENSMUST00000200959 Iqsec2Q5DU25 1478 aa13.36□□□□□ -0.27
Scn8a-207ENSMUST00000200959 Erich3F6QRE9 1637 aa13.35□□□□□ -0.27
Scn8a-207ENSMUST00000200959 Dip2bQ3UH60 1574 aa13.35□□□□□ -0.27
Scn8a-207ENSMUST00000200959 Gli3Q61602 1583 aa13.34□□□□□ -0.27
Scn8a-207ENSMUST00000200959 Arhgef40Q3UPH7 1517 aa13.34□□□□□ -0.27
Scn8a-207ENSMUST00000200959 Kidins220E9Q9B7 1793 aa13.33□□□□□ -0.28
Scn8a-207ENSMUST00000200959 Bcl11bQ99PV8 884 aa13.33□□□□□ -0.28
Scn8a-207ENSMUST00000200959 Myom2Q14BI5 1463 aa13.33□□□□□ -0.28
Scn8a-207ENSMUST00000200959 Ncapd3Q6ZQK0 1506 aa13.32□□□□□ -0.28
Scn8a-207ENSMUST00000200959 Fam208aQ69ZR9 1610 aaKnown RBP13.31□□□□□ -0.28
Scn8a-207ENSMUST00000200959 Kdm5cP41230 1554 aa13.3□□□□□ -0.28
Scn8a-207ENSMUST00000200959 Clip1Q922J3 1391 aa13.3□□□□□ -0.28
Scn8a-207ENSMUST00000200959 Talpid3E9PV87 1520 aa13.29□□□□□ -0.28
Scn8a-207ENSMUST00000200959 Afap1Q80YS6 731 aa13.29□□□□□ -0.28
Scn8a-207ENSMUST00000200959 Lemd3Q9WU40 921 aa13.28□□□□□ -0.28
Scn8a-207ENSMUST00000200959 Ncoa3O09000 1398 aa13.28□□□□□ -0.28
Scn8a-207ENSMUST00000200959 Kif27Q7M6Z4 1394 aa13.27□□□□□ -0.29
Scn8a-207ENSMUST00000200959 Fbln2P37889 1221 aa13.26□□□□□ -0.29
Scn8a-207ENSMUST00000200959 Dennd4bQ3U1Y4 1499 aa13.25□□□□□ -0.29
Scn8a-207ENSMUST00000200959 Hecw1Q8K4P8 1604 aa13.24□□□□□ -0.29
Scn8a-207ENSMUST00000200959 Arhgap5P97393 1501 aa13.23□□□□□ -0.29
Scn8a-207ENSMUST00000200959 Phlpp1Q8CHE4 1687 aa13.22□□□□□ -0.29
Scn8a-207ENSMUST00000200959 Aebp1Q640N1 1128 aa13.22□□□□□ -0.29
Scn8a-207ENSMUST00000200959 Cdc42bpaQ3UU96 1719 aa13.22□□□□□ -0.29
Scn8a-207ENSMUST00000200959 AlkP97793 1621 aa13.21□□□□□ -0.3
Scn8a-207ENSMUST00000200959 Gemin5Q8BX17 1502 aaKnown RBP13.19□□□□□ -0.3
Scn8a-207ENSMUST00000200959 Trappc8E9PWG2 1437 aa13.19□□□□□ -0.3
Scn8a-207ENSMUST00000200959 Myt1lP97500 1187 aa13.18□□□□□ -0.3
Scn8a-207ENSMUST00000200959 Gab3Q8BSM5 595 aa13.18□□□□□ -0.3
Scn8a-207ENSMUST00000200959 CltcQ68FD5 1675 aaKnown RBP13.18□□□□□ -0.3
Scn8a-207ENSMUST00000200959 Cypt2Q6P924 180 aa13.17□□□□□ -0.3
Scn8a-207ENSMUST00000200959 Rimbp3Q3V0F0 1606 aa13.16□□□□□ -0.3
Scn8a-207ENSMUST00000200959 Mug1P28665 1476 aa13.16□□□□□ -0.3
Scn8a-207ENSMUST00000200959 Fam163aQ8CAA5 168 aa13.15□□□□□ -0.3
Scn8a-207ENSMUST00000200959 Kiaa1551Q5DTW7 1521 aa13.14□□□□□ -0.31
Scn8a-207ENSMUST00000200959 Arhgap23Q69ZH9 1483 aa13.14□□□□□ -0.31
Scn8a-207ENSMUST00000200959 Trpm2Q91YD4 1506 aa13.13□□□□□ -0.31
Scn8a-207ENSMUST00000200959 Trpm1Q2TV84 1622 aa13.13□□□□□ -0.31
Scn8a-207ENSMUST00000200959 Kdm3bQ6ZPY7 1562 aa13.13□□□□□ -0.31
Scn8a-207ENSMUST00000200959 Rapgef3Q8VCC8 918 aa13.13□□□□□ -0.31
Scn8a-207ENSMUST00000200959 RictorQ6QI06 1708 aa13.12□□□□□ -0.31
Scn8a-207ENSMUST00000200959 Bcl9Q9D219 1425 aa13.1□□□□□ -0.31
Scn8a-207ENSMUST00000200959 Zc3h13E9Q784 1729 aaKnown RBP13.1□□□□□ -0.31
Scn8a-207ENSMUST00000200959 Scaf11E9PZM7 1456 aaKnown RBP13.1□□□□□ -0.31
Scn8a-207ENSMUST00000200959 Gm32742A0A1B0GT42 1604 aa13.1□□□□□ -0.31
Scn8a-207ENSMUST00000200959 Nyap1Q6PFX7 833 aa13.09□□□□□ -0.31
Scn8a-207ENSMUST00000200959 Ap3b1Q9Z1T1 1105 aa13.09□□□□□ -0.31
Scn8a-207ENSMUST00000200959 Rims2Q9EQZ7 1530 aa13.08□□□□□ -0.31
Scn8a-207ENSMUST00000200959 Cep162Q6ZQ06 1403 aa13.08□□□□□ -0.32
Scn8a-207ENSMUST00000200959 Knl1Q66JQ7 1612 aa13.08□□□□□ -0.32
Scn8a-207ENSMUST00000200959 Cdc42bpbQ7TT50 1713 aa13.07□□□□□ -0.32
Scn8a-207ENSMUST00000200959 Slit2Q9R1B9 1521 aa13.07□□□□□ -0.32
Scn8a-207ENSMUST00000200959 Pdcd11Q6NS46 1862 aaKnown RBP13.06□□□□□ -0.32
Scn8a-207ENSMUST00000200959 Lmo7E9PYF4 1699 aaKnown RBP13.06□□□□□ -0.32
Scn8a-207ENSMUST00000200959 Abcc3B2RX12 1523 aa13.06□□□□□ -0.32
Scn8a-207ENSMUST00000200959 Cdc42bpgQ80UW5 1551 aa13.06□□□□□ -0.32
Scn8a-207ENSMUST00000200959 Tubgcp6G5E8P0 1769 aa13.05□□□□□ -0.32
Scn8a-207ENSMUST00000200959 Dhx57Q6P5D3 1388 aaKnown RBP13.05□□□□□ -0.32
Scn8a-207ENSMUST00000200959 Map3k5O35099 1380 aa13.04□□□□□ -0.32
Scn8a-207ENSMUST00000200959 Tdrd9Q14BI7 1383 aa13.03□□□□□ -0.32
Scn8a-207ENSMUST00000200959 Pcf11G3X9Z4 1553 aa13.03□□□□□ -0.32
Scn8a-207ENSMUST00000200959 PzpQ61838 1495 aa13.02□□□□□ -0.33
Scn8a-207ENSMUST00000200959 Zranb1Q7M760 708 aa13.01□□□□□ -0.33
Scn8a-207ENSMUST00000200959 Naip6Q9JIB6 1403 aa13.01□□□□□ -0.33
Scn8a-207ENSMUST00000200959 Gli2Q0VGT2 1544 aa13.01□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms