RNA–Protein interactions for RNA: ENSMUST00000200959.1

Scn8a-207, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 3 BASIC

Gene Scn8a, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-207ENSMUST00000200959 Gm35339A0A140LHH9 1649 aa19.5■□□□□ 0.71
Scn8a-207ENSMUST00000200959 Abcc9P70170 1546 aa19.11■□□□□ 0.65
Scn8a-207ENSMUST00000200959 NischQ80TM9 1593 aa18.93■□□□□ 0.62
Scn8a-207ENSMUST00000200959 Abcc8B2RUS7 1588 aa18.53■□□□□ 0.56
Scn8a-207ENSMUST00000200959 ScribQ80U72 1612 aa18.44■□□□□ 0.54
Scn8a-207ENSMUST00000200959 Dnajc5bQ9CQ94 199 aa18.29■□□□□ 0.52
Scn8a-207ENSMUST00000200959 Kdm5dQ62240 1548 aa17.58■□□□□ 0.41
Scn8a-207ENSMUST00000200959 NacadQ5SWP3 1504 aa17.56■□□□□ 0.4
Scn8a-207ENSMUST00000200959 BicraF8VPZ9 1578 aa17.3■□□□□ 0.36
Scn8a-207ENSMUST00000200959 Sycp2Q9CUU3 1500 aa17.3■□□□□ 0.36
Scn8a-207ENSMUST00000200959 Dnajc5P60904 198 aa17.26■□□□□ 0.35
Scn8a-207ENSMUST00000200959 Thoc2B1AZI6 1594 aaKnown RBP17.06■□□□□ 0.32
Scn8a-207ENSMUST00000200959 Dcaf1Q80TR8 1506 aa16.84■□□□□ 0.29
Scn8a-207ENSMUST00000200959 Cc2d2aQ8CFW7 1633 aa16.78■□□□□ 0.28
Scn8a-207ENSMUST00000200959 Trim41Q5NCC3 630 aa16.77■□□□□ 0.28
Scn8a-207ENSMUST00000200959 Pds5bQ4VA53 1446 aaKnown RBP16.75■□□□□ 0.27
Scn8a-207ENSMUST00000200959 Atad2bE9Q166 1460 aaKnown RBP16.48■□□□□ 0.23
Scn8a-207ENSMUST00000200959 Rb1cc1Q9ESK9 1588 aa16.47■□□□□ 0.23
Scn8a-207ENSMUST00000200959 Fam135aQ6NS59 1506 aa16.46■□□□□ 0.23
Scn8a-207ENSMUST00000200959 Ercc6F8VPZ5 1481 aa16.43■□□□□ 0.22
Scn8a-207ENSMUST00000200959 Smarca2Q6DIC0 1577 aa16.28■□□□□ 0.2
Scn8a-207ENSMUST00000200959 Iqgap2Q3UQ44 1575 aa16.17■□□□□ 0.18
Scn8a-207ENSMUST00000200959 Frmpd1A2AKB4 1549 aa16.14■□□□□ 0.17
Scn8a-207ENSMUST00000200959 Wdr62Q3U3T8 1523 aa16.13■□□□□ 0.17
Scn8a-207ENSMUST00000200959 Baz1aO88379 1555 aa16.12■□□□□ 0.17
Scn8a-207ENSMUST00000200959 Smarca4Q3TKT4 1613 aaKnown RBP16.12■□□□□ 0.17
Scn8a-207ENSMUST00000200959 Phldb1Q6PDH0 1371 aaKnown RBP16.11■□□□□ 0.17
Scn8a-207ENSMUST00000200959 Ubl4bQ9CQ84 188 aa16.1■□□□□ 0.17
Scn8a-207ENSMUST00000200959 Zcchc6Q5BLK4 1491 aaKnown RBP16.09■□□□□ 0.17
Scn8a-207ENSMUST00000200959 Mrc2Q64449 1479 aa16.05■□□□□ 0.16
Scn8a-207ENSMUST00000200959 Unc13aQ4KUS2 1712 aa16.03■□□□□ 0.16
Scn8a-207ENSMUST00000200959 Crybg2B7ZCC2 1516 aa15.99■□□□□ 0.15
Scn8a-207ENSMUST00000200959 Cecr2E9Q2Z1 1453 aa15.97■□□□□ 0.15
Scn8a-207ENSMUST00000200959 Baz1bQ9Z277 1479 aa15.94■□□□□ 0.14
Scn8a-207ENSMUST00000200959 Lrriq1Q0P5X1 1673 aa15.88■□□□□ 0.13
Scn8a-207ENSMUST00000200959 Ccdc180J3QNE4 1664 aa15.87■□□□□ 0.13
Scn8a-207ENSMUST00000200959 Col17a1Q07563 1470 aa15.86■□□□□ 0.13
Scn8a-207ENSMUST00000200959 Shroom2A2ALU4 1481 aa15.8■□□□□ 0.12
Scn8a-207ENSMUST00000200959 Pcdh10E9PXQ7 1057 aa15.73■□□□□ 0.11
Scn8a-207ENSMUST00000200959 Rsf1E9PWW9 1441 aaKnown RBP15.71■□□□□ 0.11
Scn8a-207ENSMUST00000200959 Rhox8Q6VSS7 320 aa15.64■□□□□ 0.09
Scn8a-207ENSMUST00000200959 Kif21aQ9QXL2 1672 aa15.6■□□□□ 0.09
Scn8a-207ENSMUST00000200959 Eif4g3Q80XI3 1579 aaKnown RBP15.57■□□□□ 0.08
Scn8a-207ENSMUST00000200959 Pabpn1Q8CCS6 302 aaKnown RBP15.53■□□□□ 0.08
Scn8a-207ENSMUST00000200959 Cypt1Q8CH20 168 aa15.47■□□□□ 0.07
Scn8a-207ENSMUST00000200959 Top2bQ64511 1612 aa15.46■□□□□ 0.06
Scn8a-207ENSMUST00000200959 Pelp1Q9DBD5 1123 aaKnown RBP15.45■□□□□ 0.06
Scn8a-207ENSMUST00000200959 Cux2P70298 1426 aa15.44■□□□□ 0.06
Scn8a-207ENSMUST00000200959 CftrP26361 1476 aa15.35■□□□□ 0.05
Scn8a-207ENSMUST00000200959 Cttnbp2B9EJA2 1648 aa15.35■□□□□ 0.05
Scn8a-207ENSMUST00000200959 Synj1Q8CHC4 1574 aa15.33■□□□□ 0.05
Scn8a-207ENSMUST00000200959 Kif15Q6P9L6 1387 aa15.28■□□□□ 0.04
Scn8a-207ENSMUST00000200959 Zcchc11B2RX14 1644 aaKnown RBP15.28■□□□□ 0.04
Scn8a-207ENSMUST00000200959 Arhgef5E9Q7D5 1581 aa15.28■□□□□ 0.04
Scn8a-207ENSMUST00000200959 Urb2E9Q7L1 1524 aaKnown RBP15.27■□□□□ 0.04
Scn8a-207ENSMUST00000200959 Plb1Q3TTY0 1478 aa15.23■□□□□ 0.03
Scn8a-207ENSMUST00000200959 Ttbk1Q6PCN3 1308 aa15.19■□□□□ 0.02
Scn8a-207ENSMUST00000200959 Npm1Q61937 292 aaKnown RBP15.13■□□□□ 0.01
Scn8a-207ENSMUST00000200959 Adgrl3Q80TS3 1537 aa15.12■□□□□ 0.01
Scn8a-207ENSMUST00000200959 Rusc2Q80U22 1514 aa15.09■□□□□ 0.01
Scn8a-207ENSMUST00000200959 Dhx29Q6PGC1 1365 aaKnown RBP15.06■□□□□ 0
Scn8a-207ENSMUST00000200959 Lamc3Q9R0B6 1581 aa15.06■□□□□ 0
Scn8a-207ENSMUST00000200959 PtprtQ99M80 1454 aa15.03■□□□□ -0
Scn8a-207ENSMUST00000200959 Cep164Q5DU05 1446 aa15.02■□□□□ -0
Scn8a-207ENSMUST00000200959 Gm156Q58A37 223 aa15□□□□□ -0.01
Scn8a-207ENSMUST00000200959 Crocc2F6XLV1 1638 aa14.99□□□□□ -0.01
Scn8a-207ENSMUST00000200959 Esf1Q3V1V3 845 aaKnown RBP14.99□□□□□ -0.01
Scn8a-207ENSMUST00000200959 Brd4Q9ESU6 1400 aaKnown RBP14.99□□□□□ -0.01
Scn8a-207ENSMUST00000200959 Plekhg3Q4VAC9 1341 aa14.95□□□□□ -0.02
Scn8a-207ENSMUST00000200959 Il27Q8K3I6 234 aa14.95□□□□□ -0.02
Scn8a-207ENSMUST00000200959 Cep170Q6A065 1588 aa14.94□□□□□ -0.02
Scn8a-207ENSMUST00000200959 PtprkP35822 1457 aa14.94□□□□□ -0.02
Scn8a-207ENSMUST00000200959 Setd1bQ8CFT2 1985 aa14.91□□□□□ -0.02
Scn8a-207ENSMUST00000200959 Ift140E9PY46 1464 aa14.89□□□□□ -0.03
Scn8a-207ENSMUST00000200959 Pprc1Q6NZN1 1644 aa14.88□□□□□ -0.03
Scn8a-207ENSMUST00000200959 Gapvd1Q6PAR5 1458 aa14.87□□□□□ -0.03
Scn8a-207ENSMUST00000200959 LrpprcQ6PB66 1392 aaKnown RBP14.85□□□□□ -0.03
Scn8a-207ENSMUST00000200959 Ccdc136Q3TVA9 1136 aa14.84□□□□□ -0.03
Scn8a-207ENSMUST00000200959 Disp1Q3TDN0 1521 aa14.77□□□□□ -0.04
Scn8a-207ENSMUST00000200959 Ccdc18Q640L5 1455 aa14.76□□□□□ -0.05
Scn8a-207ENSMUST00000200959 Camsap1A2AHC3 1581 aa14.75□□□□□ -0.05
Scn8a-207ENSMUST00000200959 PogzQ8BZH4 1409 aaKnown RBP14.72□□□□□ -0.05
Scn8a-207ENSMUST00000200959 Rtl1Q7M732 1744 aa14.7□□□□□ -0.06
Scn8a-207ENSMUST00000200959 TnnQ80Z71 1560 aa14.69□□□□□ -0.06
Scn8a-207ENSMUST00000200959 Rapgef2Q8CHG7 1496 aa14.69□□□□□ -0.06
Scn8a-207ENSMUST00000200959 Nup160Q9Z0W3 1402 aaKnown RBP14.68□□□□□ -0.06
Scn8a-207ENSMUST00000200959 Ppp1r18Q8BQ30 594 aa14.67□□□□□ -0.06
Scn8a-207ENSMUST00000200959 Duox2A2AQ99 1517 aa14.66□□□□□ -0.06
Scn8a-207ENSMUST00000200959 Ythdc2B2RR83 1445 aaKnown RBP14.65□□□□□ -0.06
Scn8a-207ENSMUST00000200959 Samd9lQ69Z37 1561 aa14.64□□□□□ -0.07
Scn8a-207ENSMUST00000200959 Golga3P55937 1487 aa14.63□□□□□ -0.07
Scn8a-207ENSMUST00000200959 Fgd6Q69ZL1 1399 aa14.62□□□□□ -0.07
Scn8a-207ENSMUST00000200959 Abcc1O35379 1528 aa14.62□□□□□ -0.07
Scn8a-207ENSMUST00000200959 Cc2d2bA0A286YDU8 1405 aa14.62□□□□□ -0.07
Scn8a-207ENSMUST00000200959 Plppr3Q7TPB0 716 aa14.62□□□□□ -0.07
Scn8a-207ENSMUST00000200959 AknaQ80VW7 1404 aa14.61□□□□□ -0.07
Scn8a-207ENSMUST00000200959 Chd1P40201 1711 aa14.61□□□□□ -0.07
Scn8a-207ENSMUST00000200959 Setbp1Q9Z180 1582 aa14.6□□□□□ -0.07
Scn8a-207ENSMUST00000200959 Pbrm1Q8BSQ9 1634 aaKnown RBP14.59□□□□□ -0.07
Scn8a-207ENSMUST00000200959 Top2aQ01320 1528 aaKnown RBP14.58□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 81.8 ms