RNA–Protein interactions for RNA: ENSMUST00000173004.1

Lsm2-207, Transcript of U6 snRNA-associated Sm-like protein LSm2, mousemouse

TSL 1 (best) BASIC

Gene Lsm2, Length 870 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2-207ENSMUST00000173004 Ltbp4Q8K4G1 1666 aa21■□□□□ 0.95
Lsm2-207ENSMUST00000173004 Mlh3A0A1Y7VMP7 1443 aa20.98■□□□□ 0.95
Lsm2-207ENSMUST00000173004 Abca9Q8K449 1623 aa20.96■□□□□ 0.95
Lsm2-207ENSMUST00000173004 Mroh2aD3Z750 1679 aa20.96■□□□□ 0.95
Lsm2-207ENSMUST00000173004 OvosQ3UU35 1456 aa20.95■□□□□ 0.94
Lsm2-207ENSMUST00000173004 Ccdc141E9Q8Q6 1531 aa20.95■□□□□ 0.94
Lsm2-207ENSMUST00000173004 NpatQ8BMA5 1420 aa20.95■□□□□ 0.94
Lsm2-207ENSMUST00000173004 Kiaa0556Q8C753 1610 aa20.94■□□□□ 0.94
Lsm2-207ENSMUST00000173004 Gcc2Q8CHG3 1679 aa20.93■□□□□ 0.94
Lsm2-207ENSMUST00000173004 Phf23Q8BSN5 401 aa20.93■□□□□ 0.94
Lsm2-207ENSMUST00000173004 4930407I10RikD3Z5T8 1512 aa20.89■□□□□ 0.94
Lsm2-207ENSMUST00000173004 Ncoa1P70365 1447 aa20.88■□□□□ 0.93
Lsm2-207ENSMUST00000173004 Iqsec2Q5DU25 1478 aa20.88■□□□□ 0.93
Lsm2-207ENSMUST00000173004 Ptch1Q61115 1434 aa20.87■□□□□ 0.93
Lsm2-207ENSMUST00000173004 Fancd2Q80V62 1450 aa20.87■□□□□ 0.93
Lsm2-207ENSMUST00000173004 Supt6hQ62383 1726 aaKnown RBP20.86■□□□□ 0.93
Lsm2-207ENSMUST00000173004 Kiaa1210E9Q0C6 1637 aa20.86■□□□□ 0.93
Lsm2-207ENSMUST00000173004 Cux1P53564 1515 aa20.83■□□□□ 0.92
Lsm2-207ENSMUST00000173004 Polr1aO35134 1717 aaKnown RBP20.81■□□□□ 0.92
Lsm2-207ENSMUST00000173004 Npm2Q80W85 207 aa20.77■□□□□ 0.92
Lsm2-207ENSMUST00000173004 Ncapd3Q6ZQK0 1506 aa20.77■□□□□ 0.92
Lsm2-207ENSMUST00000173004 Zmym4A2A791 1549 aaKnown RBP20.76■□□□□ 0.91
Lsm2-207ENSMUST00000173004 Topaz1E5FYH1 1653 aa20.76■□□□□ 0.91
Lsm2-207ENSMUST00000173004 Dip2cE9PWR4 1557 aa20.73■□□□□ 0.91
Lsm2-207ENSMUST00000173004 Arhgef40Q3UPH7 1517 aa20.71■□□□□ 0.91
Lsm2-207ENSMUST00000173004 BlmO88700 1416 aa20.7■□□□□ 0.9
Lsm2-207ENSMUST00000173004 Gli3Q61602 1583 aa20.69■□□□□ 0.9
Lsm2-207ENSMUST00000173004 Myom2Q14BI5 1463 aa20.68■□□□□ 0.9
Lsm2-207ENSMUST00000173004 Ankrd26Q811D2 1581 aa20.67■□□□□ 0.9
Lsm2-207ENSMUST00000173004 Cul9Q80TT8 1865 aa20.67■□□□□ 0.9
Lsm2-207ENSMUST00000173004 Arhgap35Q91YM2 1499 aa20.66■□□□□ 0.9
Lsm2-207ENSMUST00000173004 Abca6Q8K441 1624 aa20.66■□□□□ 0.9
Lsm2-207ENSMUST00000173004 Dip2bQ3UH60 1574 aa20.65■□□□□ 0.9
Lsm2-207ENSMUST00000173004 Talpid3E9PV87 1520 aa20.65■□□□□ 0.9
Lsm2-207ENSMUST00000173004 Prex2Q3LAC4 1598 aa20.64■□□□□ 0.9
Lsm2-207ENSMUST00000173004 Magi1Q6RHR9 1471 aa20.64■□□□□ 0.89
Lsm2-207ENSMUST00000173004 Ildr2B5TVM2 661 aa20.64■□□□□ 0.89
Lsm2-207ENSMUST00000173004 RereQ80TZ9 1558 aa20.63■□□□□ 0.89
Lsm2-207ENSMUST00000173004 Afap1Q80YS6 731 aa20.62■□□□□ 0.89
Lsm2-207ENSMUST00000173004 Lemd3Q9WU40 921 aa20.61■□□□□ 0.89
Lsm2-207ENSMUST00000173004 Arap1Q4LDD4 1452 aa20.61■□□□□ 0.89
Lsm2-207ENSMUST00000173004 Ncoa2Q61026 1462 aa20.59■□□□□ 0.89
Lsm2-207ENSMUST00000173004 Rapgef6Q5NCJ1 1609 aa20.58■□□□□ 0.89
Lsm2-207ENSMUST00000173004 Bcl11bQ99PV8 884 aa20.56■□□□□ 0.88
Lsm2-207ENSMUST00000173004 Fyco1Q8VDC1 1437 aa20.55■□□□□ 0.88
Lsm2-207ENSMUST00000173004 Fbln2P37889 1221 aa20.55■□□□□ 0.88
Lsm2-207ENSMUST00000173004 Dennd4bQ3U1Y4 1499 aa20.54■□□□□ 0.88
Lsm2-207ENSMUST00000173004 Kdm5cP41230 1554 aa20.54■□□□□ 0.88
Lsm2-207ENSMUST00000173004 Erich3F6QRE9 1637 aa20.52■□□□□ 0.88
Lsm2-207ENSMUST00000173004 Gemin5Q8BX17 1502 aaKnown RBP20.52■□□□□ 0.87
Lsm2-207ENSMUST00000173004 Cfap65Q3V0B4 1847 aa20.5■□□□□ 0.87
Lsm2-207ENSMUST00000173004 Ncoa3O09000 1398 aa20.5■□□□□ 0.87
Lsm2-207ENSMUST00000173004 Cypt2Q6P924 180 aa20.5■□□□□ 0.87
Lsm2-207ENSMUST00000173004 Hecw1Q8K4P8 1604 aa20.49■□□□□ 0.87
Lsm2-207ENSMUST00000173004 AlkP97793 1621 aa20.49■□□□□ 0.87
Lsm2-207ENSMUST00000173004 Fam208aQ69ZR9 1610 aaKnown RBP20.48■□□□□ 0.87
Lsm2-207ENSMUST00000173004 Fam163aQ8CAA5 168 aa20.47■□□□□ 0.87
Lsm2-207ENSMUST00000173004 Clip1Q922J3 1391 aa20.46■□□□□ 0.87
Lsm2-207ENSMUST00000173004 Bcl9Q9D219 1425 aa20.45■□□□□ 0.86
Lsm2-207ENSMUST00000173004 Kidins220E9Q9B7 1793 aa20.45■□□□□ 0.86
Lsm2-207ENSMUST00000173004 Aebp1Q640N1 1128 aa20.45■□□□□ 0.86
Lsm2-207ENSMUST00000173004 Arhgap23Q69ZH9 1483 aa20.44■□□□□ 0.86
Lsm2-207ENSMUST00000173004 Rapgef3Q8VCC8 918 aa20.44■□□□□ 0.86
Lsm2-207ENSMUST00000173004 Kif27Q7M6Z4 1394 aa20.43■□□□□ 0.86
Lsm2-207ENSMUST00000173004 Rims2Q9EQZ7 1530 aa20.37■□□□□ 0.85
Lsm2-207ENSMUST00000173004 Phlpp1Q8CHE4 1687 aa20.36■□□□□ 0.85
Lsm2-207ENSMUST00000173004 Trappc8E9PWG2 1437 aa20.35■□□□□ 0.85
Lsm2-207ENSMUST00000173004 Rimbp3Q3V0F0 1606 aa20.35■□□□□ 0.85
Lsm2-207ENSMUST00000173004 PzpQ61838 1495 aa20.34■□□□□ 0.85
Lsm2-207ENSMUST00000173004 Slc34a2Q9DBP0 697 aa20.33■□□□□ 0.85
Lsm2-207ENSMUST00000173004 Scaf11E9PZM7 1456 aaKnown RBP20.32■□□□□ 0.84
Lsm2-207ENSMUST00000173004 Arhgap5P97393 1501 aa20.32■□□□□ 0.84
Lsm2-207ENSMUST00000173004 Trpm2Q91YD4 1506 aa20.31■□□□□ 0.84
Lsm2-207ENSMUST00000173004 Slit2Q9R1B9 1521 aa20.3■□□□□ 0.84
Lsm2-207ENSMUST00000173004 Kdm3bQ6ZPY7 1562 aa20.29■□□□□ 0.84
Lsm2-207ENSMUST00000173004 Zc3h13E9Q784 1729 aaKnown RBP20.29■□□□□ 0.84
Lsm2-207ENSMUST00000173004 Nyap1Q6PFX7 833 aa20.28■□□□□ 0.84
Lsm2-207ENSMUST00000173004 Knl1Q66JQ7 1612 aa20.26■□□□□ 0.83
Lsm2-207ENSMUST00000173004 Mug1P28665 1476 aa20.24■□□□□ 0.83
Lsm2-207ENSMUST00000173004 Kiaa1551Q5DTW7 1521 aa20.24■□□□□ 0.83
Lsm2-207ENSMUST00000173004 GphnQ8BUV3 769 aaKnown RBP20.24■□□□□ 0.83
Lsm2-207ENSMUST00000173004 Amigo3Q8C2S7 508 aa20.22■□□□□ 0.83
Lsm2-207ENSMUST00000173004 CltcQ68FD5 1675 aaKnown RBP20.22■□□□□ 0.83
Lsm2-207ENSMUST00000173004 Zranb1Q7M760 708 aa20.21■□□□□ 0.83
Lsm2-207ENSMUST00000173004 Trpm1Q2TV84 1622 aa20.17■□□□□ 0.82
Lsm2-207ENSMUST00000173004 Med14A2ABV5 1459 aaKnown RBP20.17■□□□□ 0.82
Lsm2-207ENSMUST00000173004 Abcc3B2RX12 1523 aa20.17■□□□□ 0.82
Lsm2-207ENSMUST00000173004 RictorQ6QI06 1708 aa20.16■□□□□ 0.82
Lsm2-207ENSMUST00000173004 Cdc42bpaQ3UU96 1719 aa20.15■□□□□ 0.82
Lsm2-207ENSMUST00000173004 Dhx57Q6P5D3 1388 aaKnown RBP20.13■□□□□ 0.81
Lsm2-207ENSMUST00000173004 Myt1lP97500 1187 aa20.12■□□□□ 0.81
Lsm2-207ENSMUST00000173004 Naip6Q9JIB6 1403 aa20.11■□□□□ 0.81
Lsm2-207ENSMUST00000173004 Med1Q925J9 1575 aa20.11■□□□□ 0.81
Lsm2-207ENSMUST00000173004 Cdc42bpgQ80UW5 1551 aa20.09■□□□□ 0.81
Lsm2-207ENSMUST00000173004 Tubgcp6G5E8P0 1769 aa20.09■□□□□ 0.81
Lsm2-207ENSMUST00000173004 Tom1O88746 492 aa20.09■□□□□ 0.81
Lsm2-207ENSMUST00000173004 Sart1Q9Z315 806 aaKnown RBP20.08■□□□□ 0.81
Lsm2-207ENSMUST00000173004 Map3k5O35099 1380 aa20.08■□□□□ 0.8
Lsm2-207ENSMUST00000173004 DroshaQ5HZJ0 1373 aaKnown RBP20.08■□□□□ 0.8
Lsm2-207ENSMUST00000173004 Tdrd9Q14BI7 1383 aa20.07■□□□□ 0.8
Retrieved 100 of 22,080 RNA–protein pairs in 21.4 ms