RNA–Protein interactions for RNA: ENSMUST00000165860.7

Ubr4-212, Transcript of E3 ubiquitin-protein ligase UBR4, mousemouse

TSL 5 BASIC

Gene Ubr4, Length 15,798 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4-212ENSMUST00000165860 Chic2Q9D9G3 165 aa7.74□□□□□ -1.17
Ubr4-212ENSMUST00000165860 Znf692Q3U381 531 aa7.73□□□□□ -1.17
Ubr4-212ENSMUST00000165860 Armcx1Q9CX83 456 aa7.73□□□□□ -1.17
Ubr4-212ENSMUST00000165860 Fez2Q6TYB5 348 aa7.73□□□□□ -1.17
Ubr4-212ENSMUST00000165860 Slc4a1apE9PX68 744 aa7.73□□□□□ -1.17
Ubr4-212ENSMUST00000165860 Tmx4Q8C0L0 335 aa7.72□□□□□ -1.17
Ubr4-212ENSMUST00000165860 Ube2q2Q8K2Z8 378 aa7.72□□□□□ -1.17
Ubr4-212ENSMUST00000165860 BlmO88700 1416 aa7.71□□□□□ -1.17
Ubr4-212ENSMUST00000165860 Gm6268A2A3U9 297 aa7.71□□□□□ -1.17
Ubr4-212ENSMUST00000165860 Rbm10Q99KG3 930 aaKnown RBP7.71□□□□□ -1.18
Ubr4-212ENSMUST00000165860 Rwdd1Q9CQK7 243 aa7.71□□□□□ -1.18
Ubr4-212ENSMUST00000165860 Cwc15Q9JHS9 229 aaKnown RBP7.71□□□□□ -1.18
Ubr4-212ENSMUST00000165860 Casc1Q6TDU8 730 aa7.71□□□□□ -1.18
Ubr4-212ENSMUST00000165860 Hspa5P20029 655 aaKnown RBP7.7□□□□□ -1.18
Ubr4-212ENSMUST00000165860 Sin3aQ60520 1274 aaKnown RBP7.7□□□□□ -1.18
Ubr4-212ENSMUST00000165860 AampJ3QN89 436 aa7.7□□□□□ -1.18
Ubr4-212ENSMUST00000165860 Zrsr2Q62377 462 aaKnown RBP7.7□□□□□ -1.18
Ubr4-212ENSMUST00000165860 Exoc6Q8R313 802 aa7.7□□□□□ -1.18
Ubr4-212ENSMUST00000165860 Iqcf3Q9D498 203 aa7.7□□□□□ -1.18
Ubr4-212ENSMUST00000165860 Neurod2Q62414 383 aa7.69□□□□□ -1.18
Ubr4-212ENSMUST00000165860 Kiaa0754Q69ZZ9 979 aa7.69□□□□□ -1.18
Ubr4-212ENSMUST00000165860 AcrbpQ3V140 540 aa7.69□□□□□ -1.18
Ubr4-212ENSMUST00000165860 Glipr1l2Q9CQ35 332 aa7.69□□□□□ -1.18
Ubr4-212ENSMUST00000165860 Tex2Q6ZPJ0 1128 aaKnown RBP7.69□□□□□ -1.18
Ubr4-212ENSMUST00000165860 Kif3aP28741 701 aa7.68□□□□□ -1.18
Ubr4-212ENSMUST00000165860 Gm973E9Q295 1059 aa7.68□□□□□ -1.18
Ubr4-212ENSMUST00000165860 Ncbp3Q8BZR9 615 aaKnown RBP7.68□□□□□ -1.18
Ubr4-212ENSMUST00000165860 Cwc22Q8C5N3 908 aaKnown RBP7.67□□□□□ -1.18
Ubr4-212ENSMUST00000165860 Ctr9Q62018 1173 aaKnown RBP7.67□□□□□ -1.18
Ubr4-212ENSMUST00000165860 ErmnQ5EBJ4 281 aa7.67□□□□□ -1.18
Ubr4-212ENSMUST00000165860 Rgl3Q3UYI5 709 aa7.66□□□□□ -1.18
Ubr4-212ENSMUST00000165860 Vgll3P85442 326 aa7.66□□□□□ -1.18
Ubr4-212ENSMUST00000165860 Gpatch11Q3UFS4 262 aa7.66□□□□□ -1.18
Ubr4-212ENSMUST00000165860 Trim30aP15533 496 aa7.66□□□□□ -1.18
Ubr4-212ENSMUST00000165860 Sycp1Q62209 993 aa7.65□□□□□ -1.18
Ubr4-212ENSMUST00000165860 Mapk8ip3Q9ESN9 1337 aa7.65□□□□□ -1.18
Ubr4-212ENSMUST00000165860 Psmd1Q3TXS7 953 aa7.65□□□□□ -1.18
Ubr4-212ENSMUST00000165860 NudcO35685 332 aaKnown RBP7.65□□□□□ -1.19
Ubr4-212ENSMUST00000165860 Paip2Q9D6V8 124 aa7.64□□□□□ -1.19
Ubr4-212ENSMUST00000165860 Brd4Q9ESU6 1400 aaKnown RBP7.64□□□□□ -1.19
Ubr4-212ENSMUST00000165860 Eif2s2Q99L45 331 aaKnown RBP7.64□□□□□ -1.19
Ubr4-212ENSMUST00000165860 Pdcl2Q78Y63 240 aa7.63□□□□□ -1.19
Ubr4-212ENSMUST00000165860 Fkbp15Q6P9Q6 1216 aaKnown RBP7.63□□□□□ -1.19
Ubr4-212ENSMUST00000165860 Card11Q8CIS0 1159 aa7.63□□□□□ -1.19
Ubr4-212ENSMUST00000165860 RdxP26043 583 aaKnown RBP7.63□□□□□ -1.19
Ubr4-212ENSMUST00000165860 Gtpbp4Q99ME9 634 aaKnown RBP7.63□□□□□ -1.19
Ubr4-212ENSMUST00000165860 Tmem132aQ922P8 1018 aa7.63□□□□□ -1.19
Ubr4-212ENSMUST00000165860 Fam13bQ8K2H3 851 aa7.63□□□□□ -1.19
Ubr4-212ENSMUST00000165860 Mfap1aC0HKD8 439 aaKnown RBP7.63□□□□□ -1.19
Ubr4-212ENSMUST00000165860 Mfap1bC0HKD9 439 aaKnown RBP7.63□□□□□ -1.19
Ubr4-212ENSMUST00000165860 Irx6Q9ER75 438 aa7.63□□□□□ -1.19
Ubr4-212ENSMUST00000165860 Gm45140A0A0N4SUM8 220 aa7.63□□□□□ -1.19
Ubr4-212ENSMUST00000165860 KnstrnQ9D9Z1 312 aaKnown RBP7.63□□□□□ -1.19
Ubr4-212ENSMUST00000165860 Anp32eP97822 260 aaKnown RBP7.62□□□□□ -1.19
Ubr4-212ENSMUST00000165860 Washc2Q6PGL7 1334 aa7.62□□□□□ -1.19
Ubr4-212ENSMUST00000165860 Paxip1Q6NZQ4 1056 aa7.62□□□□□ -1.19
Ubr4-212ENSMUST00000165860 Rsf1E9PWW9 1441 aaKnown RBP7.62□□□□□ -1.19
Ubr4-212ENSMUST00000165860 Smg6P61406 1418 aaKnown RBP7.61□□□□□ -1.19
Ubr4-212ENSMUST00000165860 Dydc1Q9D9T0 175 aa7.61□□□□□ -1.19
Ubr4-212ENSMUST00000165860 Setd5Q5XJV7 1441 aa7.61□□□□□ -1.19
Ubr4-212ENSMUST00000165860 Pcmtd1P59913 357 aa7.6□□□□□ -1.19
Ubr4-212ENSMUST00000165860 Ak7Q9D2H2 614 aa7.6□□□□□ -1.19
Ubr4-212ENSMUST00000165860 Grwd1Q810D6 446 aaKnown RBP7.59□□□□□ -1.19
Ubr4-212ENSMUST00000165860 Clstn1Q9EPL2 979 aa7.59□□□□□ -1.19
Ubr4-212ENSMUST00000165860 Zscan21Q07231 555 aa7.59□□□□□ -1.19
Ubr4-212ENSMUST00000165860 CntlnA2AM05 1397 aa7.59□□□□□ -1.19
Ubr4-212ENSMUST00000165860 Mia2Q91ZV0 1396 aa7.59□□□□□ -1.19
Ubr4-212ENSMUST00000165860 Cald1E9QA15 768 aaKnown RBP7.59□□□□□ -1.19
Ubr4-212ENSMUST00000165860 Rsph3aQ3UFY4 516 aa7.59□□□□□ -1.19
Ubr4-212ENSMUST00000165860 Taf3Q5HZG4 932 aa7.59□□□□□ -1.19
Ubr4-212ENSMUST00000165860 Pes1Q9EQ61 584 aaKnown RBP7.59□□□□□ -1.2
Ubr4-212ENSMUST00000165860 Ccdc173A0JLY1 547 aa7.58□□□□□ -1.2
Ubr4-212ENSMUST00000165860 Tpm3P21107 285 aaKnown RBP7.58□□□□□ -1.2
Ubr4-212ENSMUST00000165860 Znf771Q8BJ90 317 aa7.58□□□□□ -1.2
Ubr4-212ENSMUST00000165860 Zfp777B9EKF4 885 aa7.58□□□□□ -1.2
Ubr4-212ENSMUST00000165860 Fhad1A6PWD2 1420 aa7.58□□□□□ -1.2
Ubr4-212ENSMUST00000165860 Trim55G3X8Y1 545 aa7.58□□□□□ -1.2
Ubr4-212ENSMUST00000165860 R3hcc1Q8BSI6 488 aa7.58□□□□□ -1.2
Ubr4-212ENSMUST00000165860 Safb2Q80YR5 991 aaKnown RBP7.58□□□□□ -1.2
Ubr4-212ENSMUST00000165860 Ccer1Q9CQL2 403 aa7.57□□□□□ -1.2
Ubr4-212ENSMUST00000165860 Arglu1Q3UL36 271 aaKnown RBP7.57□□□□□ -1.2
Ubr4-212ENSMUST00000165860 Tshz2Q68FE9 1030 aa7.57□□□□□ -1.2
Ubr4-212ENSMUST00000165860 Ttll13A4Q9F6 804 aa7.57□□□□□ -1.2
Ubr4-212ENSMUST00000165860 Abcc8B2RUS7 1588 aa7.57□□□□□ -1.2
Ubr4-212ENSMUST00000165860 Pdia4P08003 638 aaKnown RBP7.57□□□□□ -1.2
Ubr4-212ENSMUST00000165860 Cspp1B2RX88 1205 aa7.57□□□□□ -1.2
Ubr4-212ENSMUST00000165860 Fez1Q8K0X8 392 aa7.56□□□□□ -1.2
Ubr4-212ENSMUST00000165860 Nom1Q3UFM5 854 aaKnown RBP7.56□□□□□ -1.2
Ubr4-212ENSMUST00000165860 FanciQ8K368 1330 aa7.56□□□□□ -1.2
Ubr4-212ENSMUST00000165860 Chaf1aQ9QWF0 911 aa7.56□□□□□ -1.2
Ubr4-212ENSMUST00000165860 Speer4f1Q9D5Q6 258 aa7.56□□□□□ -1.2
Ubr4-212ENSMUST00000165860 Npm1Q61937 292 aaKnown RBP7.55□□□□□ -1.2
Ubr4-212ENSMUST00000165860 NcapgE9PWG6 1004 aa7.55□□□□□ -1.2
Ubr4-212ENSMUST00000165860 Rabep1O35551 862 aa7.55□□□□□ -1.2
Ubr4-212ENSMUST00000165860 Ccdc38Q8CDN8 563 aa7.55□□□□□ -1.2
Ubr4-212ENSMUST00000165860 PnnO35691 725 aaKnown RBP7.55□□□□□ -1.2
Ubr4-212ENSMUST00000165860 Gse1Q3U3C9 1213 aa7.55□□□□□ -1.2
Ubr4-212ENSMUST00000165860 Cluap1Q8R3P7 413 aa7.55□□□□□ -1.2
Ubr4-212ENSMUST00000165860 GorabQ8BRM2 368 aa7.55□□□□□ -1.2
Ubr4-212ENSMUST00000165860 Paf1Q8K2T8 535 aa7.54□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 13.8 ms