RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Fam163aQ8CAA5 168 aa23.12■■□□□ 1.29
Trim39-203ENSMUST00000113706 Ankrd36D3Z4K0 1415 aa23.11■■□□□ 1.29
Trim39-203ENSMUST00000113706 Plekhh2Q8C115 1491 aa23.1■■□□□ 1.29
Trim39-203ENSMUST00000113706 Rfx7F8VPJ6 1459 aa23.09■■□□□ 1.29
Trim39-203ENSMUST00000113706 Fkbp15Q6P9Q6 1216 aaKnown RBP23.07■■□□□ 1.28
Trim39-203ENSMUST00000113706 Gm14025A2AP89 1413 aa23.07■■□□□ 1.28
Trim39-203ENSMUST00000113706 Chd1P40201 1711 aa23.06■■□□□ 1.28
Trim39-203ENSMUST00000113706 Cabp1Q9JLK7 227 aa23.06■■□□□ 1.28
Trim39-203ENSMUST00000113706 Fhod3Q76LL6 1578 aa23.06■■□□□ 1.28
Trim39-203ENSMUST00000113706 Neurod1Q60867 357 aa23.05■■□□□ 1.28
Trim39-203ENSMUST00000113706 Abcc1O35379 1528 aa23.05■■□□□ 1.28
Trim39-203ENSMUST00000113706 Fancd2Q80V62 1450 aa23.04■■□□□ 1.28
Trim39-203ENSMUST00000113706 Mtus2Q3UHD3 1353 aa23.01■■□□□ 1.27
Trim39-203ENSMUST00000113706 Cul7Q8VE73 1689 aa23.01■■□□□ 1.27
Trim39-203ENSMUST00000113706 SphkapQ6NSW3 1687 aa23.01■■□□□ 1.27
Trim39-203ENSMUST00000113706 Mlh3A0A1Y7VMP7 1443 aa22.99■■□□□ 1.27
Trim39-203ENSMUST00000113706 Ube2uB1AUC4 352 aa22.99■■□□□ 1.27
Trim39-203ENSMUST00000113706 Fam208aQ69ZR9 1610 aaKnown RBP22.99■■□□□ 1.27
Trim39-203ENSMUST00000113706 Kdm3bQ6ZPY7 1562 aa22.97■■□□□ 1.27
Trim39-203ENSMUST00000113706 Il16O54824 1322 aa22.94■■□□□ 1.26
Trim39-203ENSMUST00000113706 Caskin1Q6P9K8 1431 aa22.94■■□□□ 1.26
Trim39-203ENSMUST00000113706 Tdrd9Q14BI7 1383 aa22.94■■□□□ 1.26
Trim39-203ENSMUST00000113706 Ppargc1bQ8VHJ7 1014 aa22.93■■□□□ 1.26
Trim39-203ENSMUST00000113706 Hspa5P20029 655 aaKnown RBP22.93■■□□□ 1.26
Trim39-203ENSMUST00000113706 Adgrb2Q8CGM1 1561 aa22.92■■□□□ 1.26
Trim39-203ENSMUST00000113706 NclP09405 707 aaKnown RBP22.91■■□□□ 1.26
Trim39-203ENSMUST00000113706 NhsB1AV60 1647 aa22.91■■□□□ 1.26
Trim39-203ENSMUST00000113706 Setbp1Q9Z180 1582 aa22.89■■□□□ 1.26
Trim39-203ENSMUST00000113706 Cdk11bP24788 784 aaKnown RBP22.89■■□□□ 1.25
Trim39-203ENSMUST00000113706 Kiaa1210E9Q0C6 1637 aa22.87■■□□□ 1.25
Trim39-203ENSMUST00000113706 Zfp644E9QA22 1323 aa22.86■■□□□ 1.25
Trim39-203ENSMUST00000113706 Mphosph9A6H5Y1 991 aa22.86■■□□□ 1.25
Trim39-203ENSMUST00000113706 Rnf17Q99MV7 1640 aa22.84■■□□□ 1.25
Trim39-203ENSMUST00000113706 AlkP97793 1621 aa22.83■■□□□ 1.25
Trim39-203ENSMUST00000113706 Gm32742A0A1B0GT42 1604 aa22.81■■□□□ 1.24
Trim39-203ENSMUST00000113706 Wdr7Q920I9 1489 aa22.81■■□□□ 1.24
Trim39-203ENSMUST00000113706 Arhgap5P97393 1501 aa22.81■■□□□ 1.24
Trim39-203ENSMUST00000113706 Lamc1P02468 1607 aaKnown RBP22.8■■□□□ 1.24
Trim39-203ENSMUST00000113706 Kif21bQ9QXL1 1668 aa22.78■■□□□ 1.24
Trim39-203ENSMUST00000113706 Abca8bQ8K440 1620 aa22.77■■□□□ 1.24
Trim39-203ENSMUST00000113706 Fmn2Q9JL04 1578 aa22.77■■□□□ 1.24
Trim39-203ENSMUST00000113706 Naip5Q9R016 1403 aa22.77■■□□□ 1.24
Trim39-203ENSMUST00000113706 Pdcd11Q6NS46 1862 aaKnown RBP22.76■■□□□ 1.23
Trim39-203ENSMUST00000113706 Ythdc2B2RR83 1445 aaKnown RBP22.76■■□□□ 1.23
Trim39-203ENSMUST00000113706 Atp10dQ8K2X1 1416 aa22.75■■□□□ 1.23
Trim39-203ENSMUST00000113706 Trappc8E9PWG2 1437 aa22.72■■□□□ 1.23
Trim39-203ENSMUST00000113706 Znf608Q56A10 1511 aa22.71■■□□□ 1.23
Trim39-203ENSMUST00000113706 Cfap74Q3UY96 1578 aa22.71■■□□□ 1.23
Trim39-203ENSMUST00000113706 Pelp1Q9DBD5 1123 aaKnown RBP22.7■■□□□ 1.23
Trim39-203ENSMUST00000113706 Supt6hQ62383 1726 aaKnown RBP22.7■■□□□ 1.22
Trim39-203ENSMUST00000113706 PtprtQ99M80 1454 aa22.7■■□□□ 1.22
Trim39-203ENSMUST00000113706 Pkd2O35245 966 aa22.69■■□□□ 1.22
Trim39-203ENSMUST00000113706 Nop58Q6DFW4 536 aaKnown RBP22.69■■□□□ 1.22
Trim39-203ENSMUST00000113706 Camsap2Q8C1B1 1461 aa22.69■■□□□ 1.22
Trim39-203ENSMUST00000113706 Trpm2Q91YD4 1506 aa22.69■■□□□ 1.22
Trim39-203ENSMUST00000113706 Gapvd1Q6PAR5 1458 aa22.67■■□□□ 1.22
Trim39-203ENSMUST00000113706 Adgrl2Q8JZZ7 1487 aa22.67■■□□□ 1.22
Trim39-203ENSMUST00000113706 Igf1rQ60751 1373 aa22.67■■□□□ 1.22
Trim39-203ENSMUST00000113706 Mast1Q9R1L5 1570 aa22.67■■□□□ 1.22
Trim39-203ENSMUST00000113706 Rprd2Q6NXI6 1469 aaKnown RBP22.66■■□□□ 1.22
Trim39-203ENSMUST00000113706 Abcc3B2RX12 1523 aa22.64■■□□□ 1.22
Trim39-203ENSMUST00000113706 Hecw1Q8K4P8 1604 aa22.64■■□□□ 1.22
Trim39-203ENSMUST00000113706 Usp47Q8BY87 1376 aa22.63■■□□□ 1.21
Trim39-203ENSMUST00000113706 Lrrc9Q8CDN9 1456 aa22.63■■□□□ 1.21
Trim39-203ENSMUST00000113706 Ttll5Q8CHB8 1328 aa22.62■■□□□ 1.21
Trim39-203ENSMUST00000113706 Ifnlr1Q8CGK5 535 aa22.62■■□□□ 1.21
Trim39-203ENSMUST00000113706 Sart1Q9Z315 806 aaKnown RBP22.62■■□□□ 1.21
Trim39-203ENSMUST00000113706 Neurl4Q5NCX5 1563 aa22.61■■□□□ 1.21
Trim39-203ENSMUST00000113706 Anks4bQ8K3X6 423 aa22.61■■□□□ 1.21
Trim39-203ENSMUST00000113706 Cdc42bpbQ7TT50 1713 aa22.61■■□□□ 1.21
Trim39-203ENSMUST00000113706 Pik3c2gO70167 1506 aa22.61■■□□□ 1.21
Trim39-203ENSMUST00000113706 Nup155Q99P88 1391 aaKnown RBP22.6■■□□□ 1.21
Trim39-203ENSMUST00000113706 Ssh2Q5SW75 1423 aa22.58■■□□□ 1.21
Trim39-203ENSMUST00000113706 Pabpn1Q8CCS6 302 aaKnown RBP22.57■■□□□ 1.2
Trim39-203ENSMUST00000113706 Kidins220E9Q9B7 1793 aa22.57■■□□□ 1.2
Trim39-203ENSMUST00000113706 AI481877A2ALV5 1481 aa22.57■■□□□ 1.2
Trim39-203ENSMUST00000113706 Rrp7aQ9D1C9 280 aaKnown RBP22.56■■□□□ 1.2
Trim39-203ENSMUST00000113706 Cep170Q6A065 1588 aa22.56■■□□□ 1.2
Trim39-203ENSMUST00000113706 Dhx9O70133 1380 aaKnown RBP22.56■■□□□ 1.2
Trim39-203ENSMUST00000113706 Gm13697A2AK42 830 aa22.55■■□□□ 1.2
Trim39-203ENSMUST00000113706 Trak1Q6PD31 939 aa22.54■■□□□ 1.2
Trim39-203ENSMUST00000113706 Pprc1Q6NZN1 1644 aa22.53■■□□□ 1.2
Trim39-203ENSMUST00000113706 Map4P27546 1125 aaKnown RBP22.53■■□□□ 1.2
Trim39-203ENSMUST00000113706 Kif14L0N7N1 1674 aaKnown RBP22.52■■□□□ 1.2
Trim39-203ENSMUST00000113706 Zfyve16Q80U44 1528 aa22.51■■□□□ 1.19
Trim39-203ENSMUST00000113706 Asxl1P59598 1514 aa22.5■■□□□ 1.19
Trim39-203ENSMUST00000113706 Abca9Q8K449 1623 aa22.47■■□□□ 1.19
Trim39-203ENSMUST00000113706 Arid3cA6PWV5 409 aa22.46■■□□□ 1.19
Trim39-203ENSMUST00000113706 PtprgQ05909 1442 aa22.45■■□□□ 1.18
Trim39-203ENSMUST00000113706 Zbtb7cQ8VCZ7 619 aa22.43■■□□□ 1.18
Trim39-203ENSMUST00000113706 Prdm16A2A935 1275 aa22.43■■□□□ 1.18
Trim39-203ENSMUST00000113706 Map3k5O35099 1380 aa22.42■■□□□ 1.18
Trim39-203ENSMUST00000113706 Clstn2Q9ER65 966 aa22.42■■□□□ 1.18
Trim39-203ENSMUST00000113706 DroshaQ5HZJ0 1373 aaKnown RBP22.4■■□□□ 1.18
Trim39-203ENSMUST00000113706 Sin3aQ60520 1274 aaKnown RBP22.4■■□□□ 1.18
Trim39-203ENSMUST00000113706 Abca17E9PX95 1733 aa22.4■■□□□ 1.18
Trim39-203ENSMUST00000113706 Mapk8ip2Q9ERE9 830 aa22.39■■□□□ 1.18
Trim39-203ENSMUST00000113706 Xrn1P97789 1719 aaKnown RBP22.39■■□□□ 1.18
Trim39-203ENSMUST00000113706 Spag9Q58A65 1321 aaKnown RBP22.39■■□□□ 1.18
Trim39-203ENSMUST00000113706 Dot1lQ6XZL8 1540 aa22.38■■□□□ 1.17
Retrieved 100 of 22,080 RNA–protein pairs in 63 ms