RNA–Protein interactions for RNA: ENSMUST00000074067.3

Trim38-201, Transcript of Tripartite motif-containing 38, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim38, Length 1,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38-201ENSMUST00000074067 Mier1Q5UAK0 511 aa8.34□□□□□ -1.07
Trim38-201ENSMUST00000074067 Cecr2E9Q2Z1 1453 aa8.34□□□□□ -1.07
Trim38-201ENSMUST00000074067 BicraF8VPZ9 1578 aa8.33□□□□□ -1.08
Trim38-201ENSMUST00000074067 Gm11563B1AQ90 168 aa8.31□□□□□ -1.08
Trim38-201ENSMUST00000074067 Sgip1Q8VD37 806 aa8.31□□□□□ -1.08
Trim38-201ENSMUST00000074067 Krtap4-7Q9D732 168 aa8.31□□□□□ -1.08
Trim38-201ENSMUST00000074067 Cep164Q5DU05 1446 aa8.29□□□□□ -1.08
Trim38-201ENSMUST00000074067 Hoxa2P31245 372 aa8.29□□□□□ -1.08
Trim38-201ENSMUST00000074067 Thap8E9Q695 213 aa8.27□□□□□ -1.09
Trim38-201ENSMUST00000074067 Smpd1Q04519 627 aa8.27□□□□□ -1.09
Trim38-201ENSMUST00000074067 Golga3P55937 1487 aa8.27□□□□□ -1.09
Trim38-201ENSMUST00000074067 Sptlc1O35704 473 aa8.26□□□□□ -1.09
Trim38-201ENSMUST00000074067 Sall2Q9QX96 1004 aa8.26□□□□□ -1.09
Trim38-201ENSMUST00000074067 Lrrc14bQ3UJB3 510 aa8.26□□□□□ -1.09
Trim38-201ENSMUST00000074067 Noa1Q9JJG9 693 aaKnown RBP8.25□□□□□ -1.09
Trim38-201ENSMUST00000074067 CftrP26361 1476 aa8.24□□□□□ -1.09
Trim38-201ENSMUST00000074067 1700006A11RikB9EHI3 544 aa8.24□□□□□ -1.09
Trim38-201ENSMUST00000074067 Neurod1Q60867 357 aa8.24□□□□□ -1.09
Trim38-201ENSMUST00000074067 Synj1Q8CHC4 1574 aa8.24□□□□□ -1.09
Trim38-201ENSMUST00000074067 Prdm16A2A935 1275 aa8.23□□□□□ -1.09
Trim38-201ENSMUST00000074067 Erich4Q3UNU4 136 aa8.23□□□□□ -1.09
Trim38-201ENSMUST00000074067 Onecut3Q8K557 490 aa8.23□□□□□ -1.09
Trim38-201ENSMUST00000074067 Gm11555B1AQ89 175 aa8.22□□□□□ -1.09
Trim38-201ENSMUST00000074067 RragcQ99K70 398 aa8.22□□□□□ -1.09
Trim38-201ENSMUST00000074067 Acin1Q9JIX8 1338 aaKnown RBP8.22□□□□□ -1.09
Trim38-201ENSMUST00000074067 GcgrQ61606 485 aa8.2□□□□□ -1.1
Trim38-201ENSMUST00000074067 Pcdhb20Q91XZ9 799 aa8.2□□□□□ -1.1
Trim38-201ENSMUST00000074067 Kdm2aP59997 1161 aa8.19□□□□□ -1.1
Trim38-201ENSMUST00000074067 Fmr1nbQ80ZA7 238 aa8.19□□□□□ -1.1
Trim38-201ENSMUST00000074067 Smarca4Q3TKT4 1613 aaKnown RBP8.19□□□□□ -1.1
Trim38-201ENSMUST00000074067 Gm11939A2A592 99 aa8.18□□□□□ -1.1
Trim38-201ENSMUST00000074067 Crim1Q9JLL0 1037 aa8.18□□□□□ -1.1
Trim38-201ENSMUST00000074067 Rsf1E9PWW9 1441 aaKnown RBP8.18□□□□□ -1.1
Trim38-201ENSMUST00000074067 Pds5bQ4VA53 1446 aaKnown RBP8.18□□□□□ -1.1
Trim38-201ENSMUST00000074067 Setdb2Q8C267 713 aa8.17□□□□□ -1.1
Trim38-201ENSMUST00000074067 Slc24a1Q91WD8 1130 aa8.16□□□□□ -1.1
Trim38-201ENSMUST00000074067 Lhx6Q9R1R0 363 aa8.16□□□□□ -1.1
Trim38-201ENSMUST00000074067 Cttnbp2B9EJA2 1648 aa8.15□□□□□ -1.1
Trim38-201ENSMUST00000074067 Atad2bE9Q166 1460 aaKnown RBP8.15□□□□□ -1.1
Trim38-201ENSMUST00000074067 Rnf166Q3U9F6 237 aa8.15□□□□□ -1.1
Trim38-201ENSMUST00000074067 Speer2E9Q9U2 264 aa8.13□□□□□ -1.11
Trim38-201ENSMUST00000074067 Dnajc5P60904 198 aa8.13□□□□□ -1.11
Trim38-201ENSMUST00000074067 Myt1lP97500 1187 aa8.13□□□□□ -1.11
Trim38-201ENSMUST00000074067 Ccdc88bQ4QRL3 1481 aa8.13□□□□□ -1.11
Trim38-201ENSMUST00000074067 UbtfP25976 765 aaKnown RBP8.13□□□□□ -1.11
Trim38-201ENSMUST00000074067 Inpp5dQ9ES52 1191 aa8.12□□□□□ -1.11
Trim38-201ENSMUST00000074067 Map4k4P97820 1233 aaKnown RBP8.11□□□□□ -1.11
Trim38-201ENSMUST00000074067 Pbx2O35984 430 aa8.09□□□□□ -1.11
Trim38-201ENSMUST00000074067 Eya1P97767 591 aa8.09□□□□□ -1.11
Trim38-201ENSMUST00000074067 Skiv2lQ6NZR5 1244 aa8.09□□□□□ -1.11
Trim38-201ENSMUST00000074067 Pdcd7Q9WTY1 482 aa8.09□□□□□ -1.11
Trim38-201ENSMUST00000074067 Iqgap2Q3UQ44 1575 aa8.09□□□□□ -1.11
Trim38-201ENSMUST00000074067 Skap1Q3UUV5 355 aa8.08□□□□□ -1.12
Trim38-201ENSMUST00000074067 ZyxQ62523 564 aa8.08□□□□□ -1.12
Trim38-201ENSMUST00000074067 IncenpQ9WU62 880 aa8.08□□□□□ -1.12
Trim38-201ENSMUST00000074067 Bcl11aQ9QYE3 773 aa8.07□□□□□ -1.12
Trim38-201ENSMUST00000074067 Pdia6Q922R8 440 aaKnown RBP8.06□□□□□ -1.12
Trim38-201ENSMUST00000074067 Fmn1Q05860 1466 aa8.06□□□□□ -1.12
Trim38-201ENSMUST00000074067 Top2bQ64511 1612 aa8.06□□□□□ -1.12
Trim38-201ENSMUST00000074067 Slc12a5Q91V14 1138 aa8.06□□□□□ -1.12
Trim38-201ENSMUST00000074067 JmyQ9QXM1 983 aa8.05□□□□□ -1.12
Trim38-201ENSMUST00000074067 Aplp2Q06335 707 aa8.04□□□□□ -1.12
Trim38-201ENSMUST00000074067 Gpr37l1Q99JG2 481 aa8.04□□□□□ -1.12
Trim38-201ENSMUST00000074067 LipiF6YQT7 476 aa8.03□□□□□ -1.12
Trim38-201ENSMUST00000074067 Ffar3Q3UFD7 319 aa8.03□□□□□ -1.12
Trim38-201ENSMUST00000074067 Klra4Q60651 263 aa8.03□□□□□ -1.12
Trim38-201ENSMUST00000074067 Gabbr2Q80T41 940 aa8.03□□□□□ -1.12
Trim38-201ENSMUST00000074067 Emid1Q91VF5 444 aa8.03□□□□□ -1.12
Trim38-201ENSMUST00000074067 Ripply1Q2WG77 201 aa8.02□□□□□ -1.13
Trim38-201ENSMUST00000074067 Myt1Q8CFC2 1127 aa8.02□□□□□ -1.13
Trim38-201ENSMUST00000074067 Znf354bQ9QXT9 601 aa8.02□□□□□ -1.13
Trim38-201ENSMUST00000074067 Q8BT18 775 aa8.01□□□□□ -1.13
Trim38-201ENSMUST00000074067 P3h3Q8CG70 732 aa8□□□□□ -1.13
Trim38-201ENSMUST00000074067 Ercc6F8VPZ5 1481 aa8□□□□□ -1.13
Trim38-201ENSMUST00000074067 Masp1P98064 704 aa7.98□□□□□ -1.13
Trim38-201ENSMUST00000074067 Prrt3Q6PE13 971 aa7.98□□□□□ -1.13
Trim38-201ENSMUST00000074067 Il27Q8K3I6 234 aa7.98□□□□□ -1.13
Trim38-201ENSMUST00000074067 Lrfn2Q80TG9 788 aa7.97□□□□□ -1.13
Trim38-201ENSMUST00000074067 Ubl4bQ9CQ84 188 aa7.97□□□□□ -1.13
Trim38-201ENSMUST00000074067 Rapgef2Q8CHG7 1496 aa7.96□□□□□ -1.14
Trim38-201ENSMUST00000074067 Frmpd1A2AKB4 1549 aa7.96□□□□□ -1.14
Trim38-201ENSMUST00000074067 NefmP08553 848 aa7.95□□□□□ -1.14
Trim38-201ENSMUST00000074067 Ddx11Q6AXC6 880 aa7.95□□□□□ -1.14
Trim38-201ENSMUST00000074067 Ncbp3Q8BZR9 615 aaKnown RBP7.95□□□□□ -1.14
Trim38-201ENSMUST00000074067 Kif15Q6P9L6 1387 aa7.95□□□□□ -1.14
Trim38-201ENSMUST00000074067 4930567H17RikQ3V0K5 233 aa7.94□□□□□ -1.14
Trim38-201ENSMUST00000074067 Npm1Q61937 292 aaKnown RBP7.94□□□□□ -1.14
Trim38-201ENSMUST00000074067 Dnajc5gQ8C632 165 aa7.94□□□□□ -1.14
Trim38-201ENSMUST00000074067 Erbb3Q61526 1339 aa7.94□□□□□ -1.14
Trim38-201ENSMUST00000074067 Top2aQ01320 1528 aaKnown RBP7.94□□□□□ -1.14
Trim38-201ENSMUST00000074067 Mllt6B1AR10 1109 aa7.94□□□□□ -1.14
Trim38-201ENSMUST00000074067 Cc2d2aQ8CFW7 1633 aa7.94□□□□□ -1.14
Trim38-201ENSMUST00000074067 Cep162Q6ZQ06 1403 aa7.93□□□□□ -1.14
Trim38-201ENSMUST00000074067 Phldb1Q6PDH0 1371 aaKnown RBP7.93□□□□□ -1.14
Trim38-201ENSMUST00000074067 OscarQ8VBT3 265 aa7.93□□□□□ -1.14
Trim38-201ENSMUST00000074067 Wdr62Q3U3T8 1523 aa7.92□□□□□ -1.14
Trim38-201ENSMUST00000074067 Ano8Q6PB70 1060 aa7.92□□□□□ -1.14
Trim38-201ENSMUST00000074067 Rem2Q8VEL9 341 aa7.92□□□□□ -1.14
Trim38-201ENSMUST00000074067 Zeb1Q64318 1117 aa7.91□□□□□ -1.14
Trim38-201ENSMUST00000074067 Ms4a4cQ9D3F6 226 aa7.91□□□□□ -1.14
Retrieved 100 of 22,080 RNA–protein pairs in 9.2 ms