RNA–Protein interactions for RNA: ENSMUST00000074067.3

Trim38-201, Transcript of Tripartite motif-containing 38, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim38, Length 1,480 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38-201ENSMUST00000074067 Mier1Q5UAK0 511 aa8.34□□□□□ -1.07
Trim38-201ENSMUST00000074067 Cecr2E9Q2Z1 1453 aa8.34□□□□□ -1.07
Trim38-201ENSMUST00000074067 BicraF8VPZ9 1578 aa8.33□□□□□ -1.08
Trim38-201ENSMUST00000074067 Gm11563B1AQ90 168 aa8.31□□□□□ -1.08
Trim38-201ENSMUST00000074067 Sgip1Q8VD37 806 aa8.31□□□□□ -1.08
Trim38-201ENSMUST00000074067 Krtap4-7Q9D732 168 aa8.31□□□□□ -1.08
Trim38-201ENSMUST00000074067 Cep164Q5DU05 1446 aa8.29□□□□□ -1.08
Trim38-201ENSMUST00000074067 Hoxa2P31245 372 aa8.29□□□□□ -1.08
Trim38-201ENSMUST00000074067 Thap8E9Q695 213 aa8.27□□□□□ -1.09
Trim38-201ENSMUST00000074067 Smpd1Q04519 627 aa8.27□□□□□ -1.09
Trim38-201ENSMUST00000074067 Golga3P55937 1487 aa8.27□□□□□ -1.09
Trim38-201ENSMUST00000074067 Sptlc1O35704 473 aa8.26□□□□□ -1.09
Trim38-201ENSMUST00000074067 Sall2Q9QX96 1004 aa8.26□□□□□ -1.09
Trim38-201ENSMUST00000074067 Lrrc14bQ3UJB3 510 aa8.26□□□□□ -1.09
Trim38-201ENSMUST00000074067 Noa1Q9JJG9 693 aaKnown RBP8.25□□□□□ -1.09
Trim38-201ENSMUST00000074067 CftrP26361 1476 aa8.24□□□□□ -1.09
Trim38-201ENSMUST00000074067 1700006A11RikB9EHI3 544 aa8.24□□□□□ -1.09
Trim38-201ENSMUST00000074067 Neurod1Q60867 357 aa8.24□□□□□ -1.09
Trim38-201ENSMUST00000074067 Synj1Q8CHC4 1574 aa8.24□□□□□ -1.09
Trim38-201ENSMUST00000074067 Prdm16A2A935 1275 aa8.23□□□□□ -1.09
Trim38-201ENSMUST00000074067 Erich4Q3UNU4 136 aa8.23□□□□□ -1.09
Trim38-201ENSMUST00000074067 Onecut3Q8K557 490 aa8.23□□□□□ -1.09
Trim38-201ENSMUST00000074067 Gm11555B1AQ89 175 aa8.22□□□□□ -1.09
Trim38-201ENSMUST00000074067 RragcQ99K70 398 aa8.22□□□□□ -1.09
Trim38-201ENSMUST00000074067 Acin1Q9JIX8 1338 aaKnown RBP8.22□□□□□ -1.09
Trim38-201ENSMUST00000074067 GcgrQ61606 485 aa8.2□□□□□ -1.1
Trim38-201ENSMUST00000074067 Pcdhb20Q91XZ9 799 aa8.2□□□□□ -1.1
Trim38-201ENSMUST00000074067 Kdm2aP59997 1161 aa8.19□□□□□ -1.1
Trim38-201ENSMUST00000074067 Fmr1nbQ80ZA7 238 aa8.19□□□□□ -1.1
Trim38-201ENSMUST00000074067 Smarca4Q3TKT4 1613 aaKnown RBP8.19□□□□□ -1.1
Trim38-201ENSMUST00000074067 Gm11939A2A592 99 aa8.18□□□□□ -1.1
Trim38-201ENSMUST00000074067 Crim1Q9JLL0 1037 aa8.18□□□□□ -1.1
Trim38-201ENSMUST00000074067 Rsf1E9PWW9 1441 aaKnown RBP8.18□□□□□ -1.1
Trim38-201ENSMUST00000074067 Pds5bQ4VA53 1446 aaKnown RBP8.18□□□□□ -1.1
Trim38-201ENSMUST00000074067 Setdb2Q8C267 713 aa8.17□□□□□ -1.1
Trim38-201ENSMUST00000074067 Slc24a1Q91WD8 1130 aa8.16□□□□□ -1.1
Trim38-201ENSMUST00000074067 Lhx6Q9R1R0 363 aa8.16□□□□□ -1.1
Trim38-201ENSMUST00000074067 Cttnbp2B9EJA2 1648 aa8.15□□□□□ -1.1
Trim38-201ENSMUST00000074067 Atad2bE9Q166 1460 aaKnown RBP8.15□□□□□ -1.1
Trim38-201ENSMUST00000074067 Rnf166Q3U9F6 237 aa8.15□□□□□ -1.1
Trim38-201ENSMUST00000074067 Speer2E9Q9U2 264 aa8.13□□□□□ -1.11
Trim38-201ENSMUST00000074067 Dnajc5P60904 198 aa8.13□□□□□ -1.11
Trim38-201ENSMUST00000074067 Myt1lP97500 1187 aa8.13□□□□□ -1.11
Trim38-201ENSMUST00000074067 Ccdc88bQ4QRL3 1481 aa8.13□□□□□ -1.11
Trim38-201ENSMUST00000074067 UbtfP25976 765 aaKnown RBP8.13□□□□□ -1.11
Trim38-201ENSMUST00000074067 Inpp5dQ9ES52 1191 aa8.12□□□□□ -1.11
Trim38-201ENSMUST00000074067 Map4k4P97820 1233 aaKnown RBP8.11□□□□□ -1.11
Trim38-201ENSMUST00000074067 Pbx2O35984 430 aa8.09□□□□□ -1.11
Trim38-201ENSMUST00000074067 Eya1P97767 591 aa8.09□□□□□ -1.11
Trim38-201ENSMUST00000074067 Skiv2lQ6NZR5 1244 aa8.09□□□□□ -1.11
Trim38-201ENSMUST00000074067 Pdcd7Q9WTY1 482 aa8.09□□□□□ -1.11
Trim38-201ENSMUST00000074067 Iqgap2Q3UQ44 1575 aa8.09□□□□□ -1.11
Trim38-201ENSMUST00000074067 Skap1Q3UUV5 355 aa8.08□□□□□ -1.12
Trim38-201ENSMUST00000074067 ZyxQ62523 564 aa8.08□□□□□ -1.12
Trim38-201ENSMUST00000074067 IncenpQ9WU62 880 aa8.08□□□□□ -1.12
Trim38-201ENSMUST00000074067 Bcl11aQ9QYE3 773 aa8.07□□□□□ -1.12
Trim38-201ENSMUST00000074067 Pdia6Q922R8 440 aaKnown RBP8.06□□□□□ -1.12
Trim38-201ENSMUST00000074067 Fmn1Q05860 1466 aa8.06□□□□□ -1.12
Trim38-201ENSMUST00000074067 Top2bQ64511 1612 aa8.06□□□□□ -1.12
Trim38-201ENSMUST00000074067 Slc12a5Q91V14 1138 aa8.06□□□□□ -1.12
Trim38-201ENSMUST00000074067 JmyQ9QXM1 983 aa8.05□□□□□ -1.12
Trim38-201ENSMUST00000074067 Aplp2Q06335 707 aa8.04□□□□□ -1.12
Trim38-201ENSMUST00000074067 Gpr37l1Q99JG2 481 aa8.04□□□□□ -1.12
Trim38-201ENSMUST00000074067 LipiF6YQT7 476 aa8.03□□□□□ -1.12
Trim38-201ENSMUST00000074067 Ffar3Q3UFD7 319 aa8.03□□□□□ -1.12
Trim38-201ENSMUST00000074067 Klra4Q60651 263 aa8.03□□□□□ -1.12
Trim38-201ENSMUST00000074067 Gabbr2Q80T41 940 aa8.03□□□□□ -1.12
Trim38-201ENSMUST00000074067 Emid1Q91VF5 444 aa8.03□□□□□ -1.12
Trim38-201ENSMUST00000074067 Ripply1Q2WG77 201 aa8.02□□□□□ -1.13
Trim38-201ENSMUST00000074067 Myt1Q8CFC2 1127 aa8.02□□□□□ -1.13
Trim38-201ENSMUST00000074067 Znf354bQ9QXT9 601 aa8.02□□□□□ -1.13
Trim38-201ENSMUST00000074067 Q8BT18 775 aa8.01□□□□□ -1.13
Trim38-201ENSMUST00000074067 P3h3Q8CG70 732 aa8□□□□□ -1.13
Trim38-201ENSMUST00000074067 Ercc6F8VPZ5 1481 aa8□□□□□ -1.13
Trim38-201ENSMUST00000074067 Masp1P98064 704 aa7.98□□□□□ -1.13
Trim38-201ENSMUST00000074067 Prrt3Q6PE13 971 aa7.98□□□□□ -1.13
Trim38-201ENSMUST00000074067 Il27Q8K3I6 234 aa7.98□□□□□ -1.13
Trim38-201ENSMUST00000074067 Lrfn2Q80TG9 788 aa7.97□□□□□ -1.13
Trim38-201ENSMUST00000074067 Ubl4bQ9CQ84 188 aa7.97□□□□□ -1.13
Trim38-201ENSMUST00000074067 Rapgef2Q8CHG7 1496 aa7.96□□□□□ -1.14
Trim38-201ENSMUST00000074067 Frmpd1A2AKB4 1549 aa7.96□□□□□ -1.14
Trim38-201ENSMUST00000074067 NefmP08553 848 aa7.95□□□□□ -1.14
Trim38-201ENSMUST00000074067 Ddx11Q6AXC6 880 aa7.95□□□□□ -1.14
Trim38-201ENSMUST00000074067 Ncbp3Q8BZR9 615 aaKnown RBP7.95□□□□□ -1.14
Trim38-201ENSMUST00000074067 Kif15Q6P9L6 1387 aa7.95□□□□□ -1.14
Trim38-201ENSMUST00000074067 4930567H17RikQ3V0K5 233 aa7.94□□□□□ -1.14
Trim38-201ENSMUST00000074067 Npm1Q61937 292 aaKnown RBP7.94□□□□□ -1.14
Trim38-201ENSMUST00000074067 Dnajc5gQ8C632 165 aa7.94□□□□□ -1.14
Trim38-201ENSMUST00000074067 Erbb3Q61526 1339 aa7.94□□□□□ -1.14
Trim38-201ENSMUST00000074067 Top2aQ01320 1528 aaKnown RBP7.94□□□□□ -1.14
Trim38-201ENSMUST00000074067 Mllt6B1AR10 1109 aa7.94□□□□□ -1.14
Trim38-201ENSMUST00000074067 Cc2d2aQ8CFW7 1633 aa7.94□□□□□ -1.14
Trim38-201ENSMUST00000074067 Cep162Q6ZQ06 1403 aa7.93□□□□□ -1.14
Trim38-201ENSMUST00000074067 Phldb1Q6PDH0 1371 aaKnown RBP7.93□□□□□ -1.14
Trim38-201ENSMUST00000074067 OscarQ8VBT3 265 aa7.93□□□□□ -1.14
Trim38-201ENSMUST00000074067 Wdr62Q3U3T8 1523 aa7.92□□□□□ -1.14
Trim38-201ENSMUST00000074067 Ano8Q6PB70 1060 aa7.92□□□□□ -1.14
Trim38-201ENSMUST00000074067 Rem2Q8VEL9 341 aa7.92□□□□□ -1.14
Trim38-201ENSMUST00000074067 Zeb1Q64318 1117 aa7.91□□□□□ -1.14
Trim38-201ENSMUST00000074067 Ms4a4cQ9D3F6 226 aa7.91□□□□□ -1.14
Retrieved 100 of 22,080 RNA–protein pairs in 40.9 ms