RNA–Protein interactions for RNA: ENSMUST00000057525.13

Trim3-201, Transcript of Tripartite motif-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim3, Length 3,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3-201ENSMUST00000057525 Ube2uB1AUC4 352 aa22.71■■□□□ 1.23
Trim3-201ENSMUST00000057525 Kdm6bQ5NCY0 1641 aa22.71■■□□□ 1.23
Trim3-201ENSMUST00000057525 Eid3Q3V124 375 aa22.71■■□□□ 1.23
Trim3-201ENSMUST00000057525 Atp10dQ8K2X1 1416 aa22.68■■□□□ 1.22
Trim3-201ENSMUST00000057525 Naip2Q9QUK4 1447 aa22.66■■□□□ 1.22
Trim3-201ENSMUST00000057525 NhsB1AV60 1647 aa22.65■■□□□ 1.22
Trim3-201ENSMUST00000057525 Abcc5Q9R1X5 1436 aa22.65■■□□□ 1.22
Trim3-201ENSMUST00000057525 NefmP08553 848 aa22.64■■□□□ 1.21
Trim3-201ENSMUST00000057525 Igf1rQ60751 1373 aa22.62■■□□□ 1.21
Trim3-201ENSMUST00000057525 Mtus2Q3UHD3 1353 aa22.61■■□□□ 1.21
Trim3-201ENSMUST00000057525 AI481877A2ALV5 1481 aa22.6■■□□□ 1.21
Trim3-201ENSMUST00000057525 Plekhh2Q8C115 1491 aa22.6■■□□□ 1.21
Trim3-201ENSMUST00000057525 Lrrc9Q8CDN9 1456 aa22.59■■□□□ 1.21
Trim3-201ENSMUST00000057525 Arhgap5P97393 1501 aa22.58■■□□□ 1.21
Trim3-201ENSMUST00000057525 Wdr7Q920I9 1489 aa22.58■■□□□ 1.2
Trim3-201ENSMUST00000057525 Fam208aQ69ZR9 1610 aaKnown RBP22.57■■□□□ 1.2
Trim3-201ENSMUST00000057525 Mia2Q91ZV0 1396 aa22.55■■□□□ 1.2
Trim3-201ENSMUST00000057525 Adgrl3Q80TS3 1537 aa22.55■■□□□ 1.2
Trim3-201ENSMUST00000057525 Mlh3A0A1Y7VMP7 1443 aa22.54■■□□□ 1.2
Trim3-201ENSMUST00000057525 Trappc8E9PWG2 1437 aa22.54■■□□□ 1.2
Trim3-201ENSMUST00000057525 Zbtb7cQ8VCZ7 619 aa22.52■■□□□ 1.19
Trim3-201ENSMUST00000057525 Fhad1A6PWD2 1420 aa22.51■■□□□ 1.19
Trim3-201ENSMUST00000057525 Zfp644E9QA22 1323 aa22.51■■□□□ 1.19
Trim3-201ENSMUST00000057525 Col17a1Q07563 1470 aa22.51■■□□□ 1.19
Trim3-201ENSMUST00000057525 Cdk11bP24788 784 aaKnown RBP22.51■■□□□ 1.19
Trim3-201ENSMUST00000057525 Abca8bQ8K440 1620 aa22.5■■□□□ 1.19
Trim3-201ENSMUST00000057525 Ttbk1Q6PCN3 1308 aa22.49■■□□□ 1.19
Trim3-201ENSMUST00000057525 Sart1Q9Z315 806 aaKnown RBP22.49■■□□□ 1.19
Trim3-201ENSMUST00000057525 UacaQ8CGB3 1411 aa22.48■■□□□ 1.19
Trim3-201ENSMUST00000057525 NclP09405 707 aaKnown RBP22.48■■□□□ 1.19
Trim3-201ENSMUST00000057525 Vps8Q0P5W1 1427 aa22.47■■□□□ 1.19
Trim3-201ENSMUST00000057525 Caskin1Q6P9K8 1431 aa22.47■■□□□ 1.19
Trim3-201ENSMUST00000057525 Adgrb2Q8CGM1 1561 aa22.46■■□□□ 1.19
Trim3-201ENSMUST00000057525 Ak9G3UYQ4 1894 aa22.45■■□□□ 1.18
Trim3-201ENSMUST00000057525 SphkapQ6NSW3 1687 aa22.45■■□□□ 1.18
Trim3-201ENSMUST00000057525 Kiaa1210E9Q0C6 1637 aa22.44■■□□□ 1.18
Trim3-201ENSMUST00000057525 Dennd4bQ3U1Y4 1499 aa22.44■■□□□ 1.18
Trim3-201ENSMUST00000057525 Ppp1r18Q8BQ30 594 aa22.44■■□□□ 1.18
Trim3-201ENSMUST00000057525 Rrp7aQ9D1C9 280 aaKnown RBP22.44■■□□□ 1.18
Trim3-201ENSMUST00000057525 Rnf17Q99MV7 1640 aa22.42■■□□□ 1.18
Trim3-201ENSMUST00000057525 Il16O54824 1322 aa22.38■■□□□ 1.17
Trim3-201ENSMUST00000057525 Gm32742A0A1B0GT42 1604 aa22.37■■□□□ 1.17
Trim3-201ENSMUST00000057525 Kdm3bQ6ZPY7 1562 aa22.37■■□□□ 1.17
Trim3-201ENSMUST00000057525 Setbp1Q9Z180 1582 aa22.36■■□□□ 1.17
Trim3-201ENSMUST00000057525 Zfyve16Q80U44 1528 aa22.35■■□□□ 1.17
Trim3-201ENSMUST00000057525 TonslQ6NZL6 1363 aa22.34■■□□□ 1.17
Trim3-201ENSMUST00000057525 Map3k5O35099 1380 aa22.33■■□□□ 1.16
Trim3-201ENSMUST00000057525 Rfx7F8VPJ6 1459 aa22.32■■□□□ 1.16
Trim3-201ENSMUST00000057525 Pprc1Q6NZN1 1644 aa22.32■■□□□ 1.16
Trim3-201ENSMUST00000057525 Mphosph9A6H5Y1 991 aa22.31■■□□□ 1.16
Trim3-201ENSMUST00000057525 Ccer2J3QPU5 274 aa22.29■■□□□ 1.16
Trim3-201ENSMUST00000057525 Hspa5P20029 655 aaKnown RBP22.28■■□□□ 1.16
Trim3-201ENSMUST00000057525 Depdc5P61460 1591 aa22.28■■□□□ 1.16
Trim3-201ENSMUST00000057525 Lemd3Q9WU40 921 aa22.28■■□□□ 1.16
Trim3-201ENSMUST00000057525 Pdcd11Q6NS46 1862 aaKnown RBP22.28■■□□□ 1.16
Trim3-201ENSMUST00000057525 Kidins220E9Q9B7 1793 aa22.26■■□□□ 1.15
Trim3-201ENSMUST00000057525 Cfap74Q3UY96 1578 aa22.26■■□□□ 1.15
Trim3-201ENSMUST00000057525 Abca9Q8K449 1623 aa22.26■■□□□ 1.15
Trim3-201ENSMUST00000057525 Abcc3B2RX12 1523 aa22.25■■□□□ 1.15
Trim3-201ENSMUST00000057525 Cdc42bpbQ7TT50 1713 aa22.25■■□□□ 1.15
Trim3-201ENSMUST00000057525 Hnrnpul2Q00PI9 745 aaKnown RBP22.24■■□□□ 1.15
Trim3-201ENSMUST00000057525 Las1lA2BE28 776 aaKnown RBP22.23■■□□□ 1.15
Trim3-201ENSMUST00000057525 AlkP97793 1621 aa22.23■■□□□ 1.15
Trim3-201ENSMUST00000057525 Fmn2Q9JL04 1578 aa22.2■■□□□ 1.14
Trim3-201ENSMUST00000057525 Ttll5Q8CHB8 1328 aa22.2■■□□□ 1.14
Trim3-201ENSMUST00000057525 Map4P27546 1125 aaKnown RBP22.19■■□□□ 1.14
Trim3-201ENSMUST00000057525 Ssh2Q5SW75 1423 aa22.19■■□□□ 1.14
Trim3-201ENSMUST00000057525 Nup155Q99P88 1391 aaKnown RBP22.19■■□□□ 1.14
Trim3-201ENSMUST00000057525 Trak1Q6PD31 939 aa22.19■■□□□ 1.14
Trim3-201ENSMUST00000057525 Ppargc1bQ8VHJ7 1014 aa22.17■■□□□ 1.14
Trim3-201ENSMUST00000057525 Pkd2O35245 966 aa22.16■■□□□ 1.14
Trim3-201ENSMUST00000057525 Spag9Q58A65 1321 aaKnown RBP22.14■■□□□ 1.14
Trim3-201ENSMUST00000057525 Clasp1Q80TV8 1535 aaKnown RBP22.12■■□□□ 1.13
Trim3-201ENSMUST00000057525 Adgrl2Q8JZZ7 1487 aa22.12■■□□□ 1.13
Trim3-201ENSMUST00000057525 Ankrd36D3Z4K0 1415 aa22.11■■□□□ 1.13
Trim3-201ENSMUST00000057525 Ptch1Q61115 1434 aa22.1■■□□□ 1.13
Trim3-201ENSMUST00000057525 Prdm16A2A935 1275 aa22.1■■□□□ 1.13
Trim3-201ENSMUST00000057525 Kif3bQ61771 747 aa22.1■■□□□ 1.13
Trim3-201ENSMUST00000057525 Plppr3Q7TPB0 716 aa22.1■■□□□ 1.13
Trim3-201ENSMUST00000057525 Supt6hQ62383 1726 aaKnown RBP22.09■■□□□ 1.13
Trim3-201ENSMUST00000057525 OvosQ3UU35 1456 aa22.09■■□□□ 1.13
Trim3-201ENSMUST00000057525 Dhx9O70133 1380 aaKnown RBP22.08■■□□□ 1.13
Trim3-201ENSMUST00000057525 Neurod1Q60867 357 aa22.08■■□□□ 1.13
Trim3-201ENSMUST00000057525 Mast1Q9R1L5 1570 aa22.08■■□□□ 1.12
Trim3-201ENSMUST00000057525 Hecw1Q8K4P8 1604 aa22.07■■□□□ 1.12
Trim3-201ENSMUST00000057525 Dnajc5P60904 198 aa22.07■■□□□ 1.12
Trim3-201ENSMUST00000057525 Aebp2Q9Z248 504 aaKnown RBP22.07■■□□□ 1.12
Trim3-201ENSMUST00000057525 Wdr66E9Q743 1299 aa22.04■■□□□ 1.12
Trim3-201ENSMUST00000057525 Ttc37F8VPK0 1563 aa22.04■■□□□ 1.12
Trim3-201ENSMUST00000057525 Fhod3Q76LL6 1578 aa22.04■■□□□ 1.12
Trim3-201ENSMUST00000057525 Pde4cQ3UEI1 686 aa22.03■■□□□ 1.12
Trim3-201ENSMUST00000057525 AglF8VPN4 1532 aa22.02■■□□□ 1.12
Trim3-201ENSMUST00000057525 Clstn2Q9ER65 966 aa22.01■■□□□ 1.11
Trim3-201ENSMUST00000057525 Trpm2Q91YD4 1506 aa22■■□□□ 1.11
Trim3-201ENSMUST00000057525 Asxl1P59598 1514 aa21.99■■□□□ 1.11
Trim3-201ENSMUST00000057525 Xrn1P97789 1719 aaKnown RBP21.99■■□□□ 1.11
Trim3-201ENSMUST00000057525 Usp47Q8BY87 1376 aa21.98■■□□□ 1.11
Trim3-201ENSMUST00000057525 Neurl4Q5NCX5 1563 aa21.97■■□□□ 1.11
Trim3-201ENSMUST00000057525 Nos1Q9Z0J4 1429 aa21.96■■□□□ 1.11
Trim3-201ENSMUST00000057525 Usp54Q8BL06 1588 aaKnown RBP21.96■■□□□ 1.11
Retrieved 100 of 22,080 RNA–protein pairs in 25.7 ms