RNA–Protein interactions for RNA: ENSMUST00000029838.10

Rpf1-201, Transcript of Ribosome production factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rpf1, Length 1,661 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf1-201ENSMUST00000029838 Caskin1Q6P9K8 1431 aa24.86■■□□□ 1.57
Rpf1-201ENSMUST00000029838 Rfx7F8VPJ6 1459 aa24.86■■□□□ 1.57
Rpf1-201ENSMUST00000029838 Wdr7Q920I9 1489 aa24.85■■□□□ 1.57
Rpf1-201ENSMUST00000029838 Kiaa1210E9Q0C6 1637 aa24.85■■□□□ 1.57
Rpf1-201ENSMUST00000029838 Mtus2Q3UHD3 1353 aa24.85■■□□□ 1.57
Rpf1-201ENSMUST00000029838 Arhgef40Q3UPH7 1517 aa24.85■■□□□ 1.57
Rpf1-201ENSMUST00000029838 Chic2Q9D9G3 165 aa24.85■■□□□ 1.57
Rpf1-201ENSMUST00000029838 Abcc5Q9R1X5 1436 aa24.84■■□□□ 1.57
Rpf1-201ENSMUST00000029838 Igf1rQ60751 1373 aa24.82■■□□□ 1.56
Rpf1-201ENSMUST00000029838 Il16O54824 1322 aa24.79■■□□□ 1.56
Rpf1-201ENSMUST00000029838 NhsB1AV60 1647 aa24.79■■□□□ 1.56
Rpf1-201ENSMUST00000029838 Fam208aQ69ZR9 1610 aaKnown RBP24.79■■□□□ 1.56
Rpf1-201ENSMUST00000029838 Ube2uB1AUC4 352 aa24.78■■□□□ 1.56
Rpf1-201ENSMUST00000029838 Ythdc2B2RR83 1445 aaKnown RBP24.78■■□□□ 1.56
Rpf1-201ENSMUST00000029838 Cabp1Q9JLK7 227 aa24.78■■□□□ 1.56
Rpf1-201ENSMUST00000029838 Cul7Q8VE73 1689 aa24.77■■□□□ 1.56
Rpf1-201ENSMUST00000029838 Ankrd36D3Z4K0 1415 aa24.76■■□□□ 1.55
Rpf1-201ENSMUST00000029838 Kdm6bQ5NCY0 1641 aa24.74■■□□□ 1.55
Rpf1-201ENSMUST00000029838 Gapvd1Q6PAR5 1458 aa24.72■■□□□ 1.55
Rpf1-201ENSMUST00000029838 Tdrd9Q14BI7 1383 aa24.72■■□□□ 1.55
Rpf1-201ENSMUST00000029838 Rnf17Q99MV7 1640 aa24.7■■□□□ 1.54
Rpf1-201ENSMUST00000029838 Eid3Q3V124 375 aa24.69■■□□□ 1.54
Rpf1-201ENSMUST00000029838 Fhod3Q76LL6 1578 aa24.67■■□□□ 1.54
Rpf1-201ENSMUST00000029838 Atp10dQ8K2X1 1416 aa24.66■■□□□ 1.54
Rpf1-201ENSMUST00000029838 Arhgap5P97393 1501 aa24.65■■□□□ 1.54
Rpf1-201ENSMUST00000029838 Kdm3bQ6ZPY7 1562 aa24.64■■□□□ 1.54
Rpf1-201ENSMUST00000029838 Abca8bQ8K440 1620 aa24.63■■□□□ 1.53
Rpf1-201ENSMUST00000029838 Cfap74Q3UY96 1578 aa24.63■■□□□ 1.53
Rpf1-201ENSMUST00000029838 Dennd4bQ3U1Y4 1499 aa24.63■■□□□ 1.53
Rpf1-201ENSMUST00000029838 AI481877A2ALV5 1481 aa24.61■■□□□ 1.53
Rpf1-201ENSMUST00000029838 PtprtQ99M80 1454 aa24.61■■□□□ 1.53
Rpf1-201ENSMUST00000029838 Cep170Q6A065 1588 aa24.57■■□□□ 1.52
Rpf1-201ENSMUST00000029838 SphkapQ6NSW3 1687 aa24.57■■□□□ 1.52
Rpf1-201ENSMUST00000029838 Ifnlr1Q8CGK5 535 aa24.55■■□□□ 1.52
Rpf1-201ENSMUST00000029838 Pdcd11Q6NS46 1862 aaKnown RBP24.54■■□□□ 1.52
Rpf1-201ENSMUST00000029838 Fmn2Q9JL04 1578 aa24.54■■□□□ 1.52
Rpf1-201ENSMUST00000029838 Mphosph9A6H5Y1 991 aa24.53■■□□□ 1.52
Rpf1-201ENSMUST00000029838 Gm32742A0A1B0GT42 1604 aa24.53■■□□□ 1.52
Rpf1-201ENSMUST00000029838 Adgrb2Q8CGM1 1561 aa24.51■■□□□ 1.51
Rpf1-201ENSMUST00000029838 Neurl4Q5NCX5 1563 aa24.49■■□□□ 1.51
Rpf1-201ENSMUST00000029838 Lrrc9Q8CDN9 1456 aa24.49■■□□□ 1.51
Rpf1-201ENSMUST00000029838 Adgrl2Q8JZZ7 1487 aa24.49■■□□□ 1.51
Rpf1-201ENSMUST00000029838 Mast1Q9R1L5 1570 aa24.48■■□□□ 1.51
Rpf1-201ENSMUST00000029838 Pcgf6Q99NA9 353 aa24.47■■□□□ 1.51
Rpf1-201ENSMUST00000029838 Sart1Q9Z315 806 aaKnown RBP24.46■■□□□ 1.51
Rpf1-201ENSMUST00000029838 Hecw1Q8K4P8 1604 aa24.46■■□□□ 1.51
Rpf1-201ENSMUST00000029838 Abcc3B2RX12 1523 aa24.45■■□□□ 1.5
Rpf1-201ENSMUST00000029838 Znf608Q56A10 1511 aa24.45■■□□□ 1.5
Rpf1-201ENSMUST00000029838 Trappc8E9PWG2 1437 aa24.45■■□□□ 1.5
Rpf1-201ENSMUST00000029838 Lamc1P02468 1607 aaKnown RBP24.44■■□□□ 1.5
Rpf1-201ENSMUST00000029838 Supt5hO55201 1082 aaKnown RBP24.43■■□□□ 1.5
Rpf1-201ENSMUST00000029838 Clstn2Q9ER65 966 aa24.43■■□□□ 1.5
Rpf1-201ENSMUST00000029838 Setbp1Q9Z180 1582 aa24.42■■□□□ 1.5
Rpf1-201ENSMUST00000029838 Wdr66E9Q743 1299 aa24.42■■□□□ 1.5
Rpf1-201ENSMUST00000029838 Gm156Q58A37 223 aa24.42■■□□□ 1.5
Rpf1-201ENSMUST00000029838 AlkP97793 1621 aa24.42■■□□□ 1.5
Rpf1-201ENSMUST00000029838 Prdm16A2A935 1275 aa24.4■■□□□ 1.5
Rpf1-201ENSMUST00000029838 Arid3cA6PWV5 409 aa24.4■■□□□ 1.5
Rpf1-201ENSMUST00000029838 Hspa5P20029 655 aaKnown RBP24.4■■□□□ 1.5
Rpf1-201ENSMUST00000029838 Rrp7aQ9D1C9 280 aaKnown RBP24.4■■□□□ 1.5
Rpf1-201ENSMUST00000029838 Zfp644E9QA22 1323 aa24.39■■□□□ 1.5
Rpf1-201ENSMUST00000029838 Nup155Q99P88 1391 aaKnown RBP24.38■■□□□ 1.49
Rpf1-201ENSMUST00000029838 Pkd2O35245 966 aa24.34■■□□□ 1.49
Rpf1-201ENSMUST00000029838 Zfyve16Q80U44 1528 aa24.34■■□□□ 1.49
Rpf1-201ENSMUST00000029838 Adgrl3Q80TS3 1537 aa24.33■■□□□ 1.49
Rpf1-201ENSMUST00000029838 Kif21bQ9QXL1 1668 aa24.33■■□□□ 1.49
Rpf1-201ENSMUST00000029838 Trpm2Q91YD4 1506 aa24.32■■□□□ 1.48
Rpf1-201ENSMUST00000029838 Aebp2Q9Z248 504 aaKnown RBP24.32■■□□□ 1.48
Rpf1-201ENSMUST00000029838 ClspnQ80YR7 1315 aa24.31■■□□□ 1.48
Rpf1-201ENSMUST00000029838 Kidins220E9Q9B7 1793 aa24.3■■□□□ 1.48
Rpf1-201ENSMUST00000029838 Map4P27546 1125 aaKnown RBP24.3■■□□□ 1.48
Rpf1-201ENSMUST00000029838 Lemd3Q9WU40 921 aa24.29■■□□□ 1.48
Rpf1-201ENSMUST00000029838 Cdc42bpbQ7TT50 1713 aa24.29■■□□□ 1.48
Rpf1-201ENSMUST00000029838 Ttll5Q8CHB8 1328 aa24.27■■□□□ 1.48
Rpf1-201ENSMUST00000029838 Ak9G3UYQ4 1894 aa24.26■■□□□ 1.47
Rpf1-201ENSMUST00000029838 Ssh2Q5SW75 1423 aa24.26■■□□□ 1.47
Rpf1-201ENSMUST00000029838 Sall2Q9QX96 1004 aa24.25■■□□□ 1.47
Rpf1-201ENSMUST00000029838 Camsap2Q8C1B1 1461 aa24.24■■□□□ 1.47
Rpf1-201ENSMUST00000029838 Rprd2Q6NXI6 1469 aaKnown RBP24.23■■□□□ 1.47
Rpf1-201ENSMUST00000029838 DroshaQ5HZJ0 1373 aaKnown RBP24.23■■□□□ 1.47
Rpf1-201ENSMUST00000029838 Abca9Q8K449 1623 aa24.23■■□□□ 1.47
Rpf1-201ENSMUST00000029838 Naip5Q9R016 1403 aa24.23■■□□□ 1.47
Rpf1-201ENSMUST00000029838 Spag9Q58A65 1321 aaKnown RBP24.22■■□□□ 1.47
Rpf1-201ENSMUST00000029838 Pik3c2gO70167 1506 aa24.22■■□□□ 1.47
Rpf1-201ENSMUST00000029838 Trak1Q6PD31 939 aa24.21■■□□□ 1.47
Rpf1-201ENSMUST00000029838 Pprc1Q6NZN1 1644 aa24.21■■□□□ 1.47
Rpf1-201ENSMUST00000029838 Usp47Q8BY87 1376 aa24.2■■□□□ 1.47
Rpf1-201ENSMUST00000029838 Supt6hQ62383 1726 aaKnown RBP24.19■■□□□ 1.46
Rpf1-201ENSMUST00000029838 PtprgQ05909 1442 aa24.16■■□□□ 1.46
Rpf1-201ENSMUST00000029838 Map3k5O35099 1380 aa24.15■■□□□ 1.46
Rpf1-201ENSMUST00000029838 Hdac5Q9Z2V6 1113 aa24.15■■□□□ 1.46
Rpf1-201ENSMUST00000029838 Col17a1Q07563 1470 aa24.14■■□□□ 1.46
Rpf1-201ENSMUST00000029838 OvosQ3UU35 1456 aa24.13■■□□□ 1.45
Rpf1-201ENSMUST00000029838 Abca17E9PX95 1733 aa24.11■■□□□ 1.45
Rpf1-201ENSMUST00000029838 Clasp1Q80TV8 1535 aaKnown RBP24.1■■□□□ 1.45
Rpf1-201ENSMUST00000029838 Zbtb7cQ8VCZ7 619 aa24.1■■□□□ 1.45
Rpf1-201ENSMUST00000029838 Dhx9O70133 1380 aaKnown RBP24.1■■□□□ 1.45
Rpf1-201ENSMUST00000029838 Gm13697A2AK42 830 aa24.08■■□□□ 1.45
Rpf1-201ENSMUST00000029838 AglF8VPN4 1532 aa24.08■■□□□ 1.45
Rpf1-201ENSMUST00000029838 Pde4cQ3UEI1 686 aa24.08■■□□□ 1.44
Retrieved 100 of 22,080 RNA–protein pairs in 86.7 ms