RNA–Protein interactions for RNA: ENSMUST00000029421.5

Ptx3-201, Transcript of Pentraxin-related protein PTX3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptx3, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx3-201ENSMUST00000029421 Chd1P40201 1711 aa32.1■■■□□ 2.73
Ptx3-201ENSMUST00000029421 Adcy10Q8C0T9 1614 aa32.09■■■□□ 2.73
Ptx3-201ENSMUST00000029421 UacaQ8CGB3 1411 aa32.08■■■□□ 2.73
Ptx3-201ENSMUST00000029421 Chic2Q9D9G3 165 aa32.05■■■□□ 2.72
Ptx3-201ENSMUST00000029421 Fancd2Q80V62 1450 aa32.05■■■□□ 2.72
Ptx3-201ENSMUST00000029421 Abcc5Q9R1X5 1436 aa32.03■■■□□ 2.72
Ptx3-201ENSMUST00000029421 Kdm6bQ5NCY0 1641 aa32.02■■■□□ 2.72
Ptx3-201ENSMUST00000029421 Ccer2J3QPU5 274 aa32.01■■■□□ 2.72
Ptx3-201ENSMUST00000029421 Dennd4bQ3U1Y4 1499 aa31.98■■■□□ 2.71
Ptx3-201ENSMUST00000029421 Plekhh2Q8C115 1491 aa31.98■■■□□ 2.71
Ptx3-201ENSMUST00000029421 Eid3Q3V124 375 aa31.97■■■□□ 2.71
Ptx3-201ENSMUST00000029421 Rfx7F8VPJ6 1459 aa31.96■■■□□ 2.71
Ptx3-201ENSMUST00000029421 Mlh3A0A1Y7VMP7 1443 aa31.95■■■□□ 2.7
Ptx3-201ENSMUST00000029421 Cabp1Q9JLK7 227 aa31.94■■■□□ 2.7
Ptx3-201ENSMUST00000029421 Cul7Q8VE73 1689 aa31.93■■■□□ 2.7
Ptx3-201ENSMUST00000029421 Fam208aQ69ZR9 1610 aaKnown RBP31.92■■■□□ 2.7
Ptx3-201ENSMUST00000029421 Caskin1Q6P9K8 1431 aa31.89■■■□□ 2.7
Ptx3-201ENSMUST00000029421 Mtus2Q3UHD3 1353 aa31.88■■■□□ 2.69
Ptx3-201ENSMUST00000029421 Aplp2Q06335 707 aa31.88■■■□□ 2.69
Ptx3-201ENSMUST00000029421 NhsB1AV60 1647 aa31.87■■■□□ 2.69
Ptx3-201ENSMUST00000029421 Kiaa1210E9Q0C6 1637 aa31.85■■■□□ 2.69
Ptx3-201ENSMUST00000029421 Ankrd36D3Z4K0 1415 aa31.84■■■□□ 2.69
Ptx3-201ENSMUST00000029421 Il16O54824 1322 aa31.84■■■□□ 2.69
Ptx3-201ENSMUST00000029421 1700123L14RikQ3V2K7 440 aa31.83■■■□□ 2.69
Ptx3-201ENSMUST00000029421 Tdrd9Q14BI7 1383 aa31.82■■■□□ 2.68
Ptx3-201ENSMUST00000029421 Csrnp3P59055 597 aa31.82■■■□□ 2.68
Ptx3-201ENSMUST00000029421 Ythdc2B2RR83 1445 aaKnown RBP31.81■■■□□ 2.68
Ptx3-201ENSMUST00000029421 Fhod3Q76LL6 1578 aa31.81■■■□□ 2.68
Ptx3-201ENSMUST00000029421 Pelp1Q9DBD5 1123 aaKnown RBP31.8■■■□□ 2.68
Ptx3-201ENSMUST00000029421 Wdr7Q920I9 1489 aa31.79■■■□□ 2.68
Ptx3-201ENSMUST00000029421 NclP09405 707 aaKnown RBP31.78■■■□□ 2.68
Ptx3-201ENSMUST00000029421 SphkapQ6NSW3 1687 aa31.78■■■□□ 2.68
Ptx3-201ENSMUST00000029421 Kdm3bQ6ZPY7 1562 aa31.77■■■□□ 2.68
Ptx3-201ENSMUST00000029421 Ube2uB1AUC4 352 aa31.75■■■□□ 2.67
Ptx3-201ENSMUST00000029421 Pabpn1Q8CCS6 302 aaKnown RBP31.74■■■□□ 2.67
Ptx3-201ENSMUST00000029421 Igf1rQ60751 1373 aa31.72■■■□□ 2.67
Ptx3-201ENSMUST00000029421 Rnf17Q99MV7 1640 aa31.71■■■□□ 2.67
Ptx3-201ENSMUST00000029421 Gapvd1Q6PAR5 1458 aa31.71■■■□□ 2.67
Ptx3-201ENSMUST00000029421 PtprtQ99M80 1454 aa31.69■■■□□ 2.66
Ptx3-201ENSMUST00000029421 Atp10dQ8K2X1 1416 aa31.69■■■□□ 2.66
Ptx3-201ENSMUST00000029421 Adgrb2Q8CGM1 1561 aa31.69■■■□□ 2.66
Ptx3-201ENSMUST00000029421 Abca8bQ8K440 1620 aa31.67■■■□□ 2.66
Ptx3-201ENSMUST00000029421 Arhgap5P97393 1501 aa31.66■■■□□ 2.66
Ptx3-201ENSMUST00000029421 Gm32742A0A1B0GT42 1604 aa31.63■■■□□ 2.65
Ptx3-201ENSMUST00000029421 Mphosph9A6H5Y1 991 aa31.61■■■□□ 2.65
Ptx3-201ENSMUST00000029421 Myt1Q8CFC2 1127 aa31.6■■■□□ 2.65
Ptx3-201ENSMUST00000029421 Znf608Q56A10 1511 aa31.59■■■□□ 2.65
Ptx3-201ENSMUST00000029421 Zfp644E9QA22 1323 aa31.58■■■□□ 2.65
Ptx3-201ENSMUST00000029421 Setbp1Q9Z180 1582 aa31.58■■■□□ 2.65
Ptx3-201ENSMUST00000029421 Pdcd11Q6NS46 1862 aaKnown RBP31.57■■■□□ 2.64
Ptx3-201ENSMUST00000029421 Hspa5P20029 655 aaKnown RBP31.57■■■□□ 2.64
Ptx3-201ENSMUST00000029421 CenpbP27790 599 aa31.57■■■□□ 2.64
Ptx3-201ENSMUST00000029421 Cfap74Q3UY96 1578 aa31.56■■■□□ 2.64
Ptx3-201ENSMUST00000029421 AlkP97793 1621 aa31.55■■■□□ 2.64
Ptx3-201ENSMUST00000029421 Trappc8E9PWG2 1437 aa31.55■■■□□ 2.64
Ptx3-201ENSMUST00000029421 Fmn2Q9JL04 1578 aa31.55■■■□□ 2.64
Ptx3-201ENSMUST00000029421 AI481877A2ALV5 1481 aa31.54■■■□□ 2.64
Ptx3-201ENSMUST00000029421 Cep170Q6A065 1588 aa31.54■■■□□ 2.64
Ptx3-201ENSMUST00000029421 Lrrc9Q8CDN9 1456 aa31.54■■■□□ 2.64
Ptx3-201ENSMUST00000029421 Ifnlr1Q8CGK5 535 aa31.52■■■□□ 2.64
Ptx3-201ENSMUST00000029421 Tnnt3Q9QZ47 272 aa31.52■■■□□ 2.64
Ptx3-201ENSMUST00000029421 Abcc3B2RX12 1523 aa31.47■■■□□ 2.63
Ptx3-201ENSMUST00000029421 Lamc1P02468 1607 aaKnown RBP31.47■■■□□ 2.63
Ptx3-201ENSMUST00000029421 Adgrl2Q8JZZ7 1487 aa31.46■■■□□ 2.63
Ptx3-201ENSMUST00000029421 Mast1Q9R1L5 1570 aa31.45■■■□□ 2.63
Ptx3-201ENSMUST00000029421 Ppargc1bQ8VHJ7 1014 aa31.44■■■□□ 2.62
Ptx3-201ENSMUST00000029421 Sart1Q9Z315 806 aaKnown RBP31.44■■■□□ 2.62
Ptx3-201ENSMUST00000029421 Neurl4Q5NCX5 1563 aa31.42■■■□□ 2.62
Ptx3-201ENSMUST00000029421 Trpm2Q91YD4 1506 aa31.39■■■□□ 2.62
Ptx3-201ENSMUST00000029421 Hecw1Q8K4P8 1604 aa31.39■■■□□ 2.62
Ptx3-201ENSMUST00000029421 Kif21bQ9QXL1 1668 aa31.39■■■□□ 2.62
Ptx3-201ENSMUST00000029421 Pkd2O35245 966 aa31.36■■■□□ 2.61
Ptx3-201ENSMUST00000029421 Zfyve16Q80U44 1528 aa31.35■■■□□ 2.61
Ptx3-201ENSMUST00000029421 Camsap2Q8C1B1 1461 aa31.34■■■□□ 2.61
Ptx3-201ENSMUST00000029421 Arid3cA6PWV5 409 aa31.34■■■□□ 2.61
Ptx3-201ENSMUST00000029421 Rrp7aQ9D1C9 280 aaKnown RBP31.34■■■□□ 2.61
Ptx3-201ENSMUST00000029421 Stra8P70278 393 aa31.33■■■□□ 2.61
Ptx3-201ENSMUST00000029421 Gm156Q58A37 223 aa31.33■■■□□ 2.61
Ptx3-201ENSMUST00000029421 Naip5Q9R016 1403 aa31.33■■■□□ 2.61
Ptx3-201ENSMUST00000029421 Nup155Q99P88 1391 aaKnown RBP31.33■■■□□ 2.61
Ptx3-201ENSMUST00000029421 Cdc42bpbQ7TT50 1713 aa31.32■■■□□ 2.6
Ptx3-201ENSMUST00000029421 Kidins220E9Q9B7 1793 aa31.32■■■□□ 2.6
Ptx3-201ENSMUST00000029421 Ttll5Q8CHB8 1328 aa31.32■■■□□ 2.6
Ptx3-201ENSMUST00000029421 Ssh2Q5SW75 1423 aa31.29■■■□□ 2.6
Ptx3-201ENSMUST00000029421 Supt6hQ62383 1726 aaKnown RBP31.28■■■□□ 2.6
Ptx3-201ENSMUST00000029421 Rprd2Q6NXI6 1469 aaKnown RBP31.25■■■□□ 2.59
Ptx3-201ENSMUST00000029421 Prdm16A2A935 1275 aa31.24■■■□□ 2.59
Ptx3-201ENSMUST00000029421 Abca9Q8K449 1623 aa31.23■■■□□ 2.59
Ptx3-201ENSMUST00000029421 Map4P27546 1125 aaKnown RBP31.23■■■□□ 2.59
Ptx3-201ENSMUST00000029421 Pik3c2gO70167 1506 aa31.21■■■□□ 2.59
Ptx3-201ENSMUST00000029421 Usp47Q8BY87 1376 aa31.21■■■□□ 2.59
Ptx3-201ENSMUST00000029421 Trak1Q6PD31 939 aa31.18■■■□□ 2.58
Ptx3-201ENSMUST00000029421 Pprc1Q6NZN1 1644 aa31.18■■■□□ 2.58
Ptx3-201ENSMUST00000029421 Adgrl3Q80TS3 1537 aa31.17■■■□□ 2.58
Ptx3-201ENSMUST00000029421 Gm13697A2AK42 830 aa31.16■■■□□ 2.58
Ptx3-201ENSMUST00000029421 Clstn2Q9ER65 966 aa31.16■■■□□ 2.58
Ptx3-201ENSMUST00000029421 Dhx9O70133 1380 aaKnown RBP31.16■■■□□ 2.58
Ptx3-201ENSMUST00000029421 Ak9G3UYQ4 1894 aa31.13■■■□□ 2.57
Ptx3-201ENSMUST00000029421 Map3k5O35099 1380 aa31.12■■■□□ 2.57
Ptx3-201ENSMUST00000029421 PtprgQ05909 1442 aa31.11■■■□□ 2.57
Retrieved 100 of 22,080 RNA–protein pairs in 15.8 ms